Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5295.t1
Gene name
Locationscaffold_029:164412..165318
Strand-
Gene length (bp)906
Transcript length (bp)906
Coding sequence length (bp)906
Protein length (aa) 302

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13883 Pyrid_oxidase_2 Pyridoxamine 5'-phosphate oxidase 4.3E-33 77 268

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

Domain # Start End Length
1 7 26 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5295.t1
MMARPLITTFFSALVLLTYLLLHVGASPLAEQAPLTDTITNYNLDTKTDTDTDTLIPSSSNLNTDFAPPSWFTST
LLARRLLALSRTGTASTIFPSPLPPNSHTPPSLAGHSTTQTEYLADCDPYLPANDTSSESPRGLGNPTFLALHVA
TTFRNTAAGSNISLSLDWWDHVNDTTPVWPGFPLSEAGLPRVTLFGYVEPFETPVPEAVESALTKCFLEKHPDAE
AWLPGKEGAPHSSYWARLRVEQVYWIGGFGGLQRIGWLNVSEWKGITQWGSGGGGGGFGDGSGRGWGDVRLPGEK
E*
Coding >Ani_SJS100_1|g5295.t1
ATGATGGCCCGTCCACTCATCACCACCTTCTTCTCCGCACTCGTCCTCCTAACCTATCTCCTCCTCCACGTCGGT
GCCAGCCCTCTAGCCGAACAGGCTCCTCTCACCGACACAATCACCAACTACAACCTCGACACCAAAACCGACACC
GACACCGACACCCTCATCCCCTCCTCCTCCAACCTCAACACCGACTTCGCCCCACCATCCTGGTTCACCTCGACC
CTCCTGGCGCGGCGCCTCCTCGCCCTCTCCCGCACCGGCACCGCCTCCACCATCTTCCCCTCCCCACTGCCCCCC
AACTCCCACACGCCCCCCTCCCTGGCAGGCCACTCCACAACCCAAACCGAATACCTGGCCGACTGCGACCCCTAC
CTCCCCGCCAACGACACCTCCTCCGAATCCCCCCGTGGGCTCGGCAACCCGACCTTCCTGGCCCTGCACGTGGCC
ACCACCTTCCGCAACACCGCCGCGGGATCCAACATCTCGCTCTCGCTCGACTGGTGGGACCACGTCAACGATACC
ACCCCCGTGTGGCCCGGGTTCCCGCTCAGCGAGGCCGGATTACCCCGCGTCACGCTGTTCGGGTATGTCGAGCCG
TTCGAGACGCCTGTGCCCGAGGCGGTGGAGAGCGCGTTGACGAAGTGTTTCCTGGAGAAGCATCCTGATGCTGAG
GCCTGGTTGCCTGGAAAGGAGGGCGCGCCGCATAGTAGTTATTGGGCAAGGTTGAGGGTGGAACAGGTTTATTGG
ATTGGAGGGTTTGGGGGGTTGCAGAGGATTGGGTGGTTGAATGTTAGTGAGTGGAAGGGGATCACGCAGTGGGGG
AGTGGTGGCGGTGGGGGTGGATTTGGGGATGGGAGTGGGAGAGGGTGGGGGGATGTGAGGTTGCCTGGGGAGAAG
GAGTAA
Transcript >Ani_SJS100_1|g5295.t1
ATGATGGCCCGTCCACTCATCACCACCTTCTTCTCCGCACTCGTCCTCCTAACCTATCTCCTCCTCCACGTCGGT
GCCAGCCCTCTAGCCGAACAGGCTCCTCTCACCGACACAATCACCAACTACAACCTCGACACCAAAACCGACACC
GACACCGACACCCTCATCCCCTCCTCCTCCAACCTCAACACCGACTTCGCCCCACCATCCTGGTTCACCTCGACC
CTCCTGGCGCGGCGCCTCCTCGCCCTCTCCCGCACCGGCACCGCCTCCACCATCTTCCCCTCCCCACTGCCCCCC
AACTCCCACACGCCCCCCTCCCTGGCAGGCCACTCCACAACCCAAACCGAATACCTGGCCGACTGCGACCCCTAC
CTCCCCGCCAACGACACCTCCTCCGAATCCCCCCGTGGGCTCGGCAACCCGACCTTCCTGGCCCTGCACGTGGCC
ACCACCTTCCGCAACACCGCCGCGGGATCCAACATCTCGCTCTCGCTCGACTGGTGGGACCACGTCAACGATACC
ACCCCCGTGTGGCCCGGGTTCCCGCTCAGCGAGGCCGGATTACCCCGCGTCACGCTGTTCGGGTATGTCGAGCCG
TTCGAGACGCCTGTGCCCGAGGCGGTGGAGAGCGCGTTGACGAAGTGTTTCCTGGAGAAGCATCCTGATGCTGAG
GCCTGGTTGCCTGGAAAGGAGGGCGCGCCGCATAGTAGTTATTGGGCAAGGTTGAGGGTGGAACAGGTTTATTGG
ATTGGAGGGTTTGGGGGGTTGCAGAGGATTGGGTGGTTGAATGTTAGTGAGTGGAAGGGGATCACGCAGTGGGGG
AGTGGTGGCGGTGGGGGTGGATTTGGGGATGGGAGTGGGAGAGGGTGGGGGGATGTGAGGTTGCCTGGGGAGAAG
GAGTAA
Gene >Ani_SJS100_1|g5295.t1
ATGATGGCCCGTCCACTCATCACCACCTTCTTCTCCGCACTCGTCCTCCTAACCTATCTCCTCCTCCACGTCGGT
GCCAGCCCTCTAGCCGAACAGGCTCCTCTCACCGACACAATCACCAACTACAACCTCGACACCAAAACCGACACC
GACACCGACACCCTCATCCCCTCCTCCTCCAACCTCAACACCGACTTCGCCCCACCATCCTGGTTCACCTCGACC
CTCCTGGCGCGGCGCCTCCTCGCCCTCTCCCGCACCGGCACCGCCTCCACCATCTTCCCCTCCCCACTGCCCCCC
AACTCCCACACGCCCCCCTCCCTGGCAGGCCACTCCACAACCCAAACCGAATACCTGGCCGACTGCGACCCCTAC
CTCCCCGCCAACGACACCTCCTCCGAATCCCCCCGTGGGCTCGGCAACCCGACCTTCCTGGCCCTGCACGTGGCC
ACCACCTTCCGCAACACCGCCGCGGGATCCAACATCTCGCTCTCGCTCGACTGGTGGGACCACGTCAACGATACC
ACCCCCGTGTGGCCCGGGTTCCCGCTCAGCGAGGCCGGATTACCCCGCGTCACGCTGTTCGGGTATGTCGAGCCG
TTCGAGACGCCTGTGCCCGAGGCGGTGGAGAGCGCGTTGACGAAGTGTTTCCTGGAGAAGCATCCTGATGCTGAG
GCCTGGTTGCCTGGAAAGGAGGGCGCGCCGCATAGTAGTTATTGGGCAAGGTTGAGGGTGGAACAGGTTTATTGG
ATTGGAGGGTTTGGGGGGTTGCAGAGGATTGGGTGGTTGAATGTTAGTGAGTGGAAGGGGATCACGCAGTGGGGG
AGTGGTGGCGGTGGGGGTGGATTTGGGGATGGGAGTGGGAGAGGGTGGGGGGATGTGAGGTTGCCTGGGGAGAAG
GAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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