Protein ID | Ani_SJS100_1|g5295.t1 |
Gene name | |
Location | scaffold_029:164412..165318 |
Strand | - |
Gene length (bp) | 906 |
Transcript length (bp) | 906 |
Coding sequence length (bp) | 906 |
Protein length (aa) | 302 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13883 | Pyrid_oxidase_2 | Pyridoxamine 5'-phosphate oxidase | 4.3E-33 | 77 | 268 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 27 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 26 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5295.t1 MMARPLITTFFSALVLLTYLLLHVGASPLAEQAPLTDTITNYNLDTKTDTDTDTLIPSSSNLNTDFAPPSWFTST LLARRLLALSRTGTASTIFPSPLPPNSHTPPSLAGHSTTQTEYLADCDPYLPANDTSSESPRGLGNPTFLALHVA TTFRNTAAGSNISLSLDWWDHVNDTTPVWPGFPLSEAGLPRVTLFGYVEPFETPVPEAVESALTKCFLEKHPDAE AWLPGKEGAPHSSYWARLRVEQVYWIGGFGGLQRIGWLNVSEWKGITQWGSGGGGGGFGDGSGRGWGDVRLPGEK E* |
Coding | >Ani_SJS100_1|g5295.t1 ATGATGGCCCGTCCACTCATCACCACCTTCTTCTCCGCACTCGTCCTCCTAACCTATCTCCTCCTCCACGTCGGT GCCAGCCCTCTAGCCGAACAGGCTCCTCTCACCGACACAATCACCAACTACAACCTCGACACCAAAACCGACACC GACACCGACACCCTCATCCCCTCCTCCTCCAACCTCAACACCGACTTCGCCCCACCATCCTGGTTCACCTCGACC CTCCTGGCGCGGCGCCTCCTCGCCCTCTCCCGCACCGGCACCGCCTCCACCATCTTCCCCTCCCCACTGCCCCCC AACTCCCACACGCCCCCCTCCCTGGCAGGCCACTCCACAACCCAAACCGAATACCTGGCCGACTGCGACCCCTAC CTCCCCGCCAACGACACCTCCTCCGAATCCCCCCGTGGGCTCGGCAACCCGACCTTCCTGGCCCTGCACGTGGCC ACCACCTTCCGCAACACCGCCGCGGGATCCAACATCTCGCTCTCGCTCGACTGGTGGGACCACGTCAACGATACC ACCCCCGTGTGGCCCGGGTTCCCGCTCAGCGAGGCCGGATTACCCCGCGTCACGCTGTTCGGGTATGTCGAGCCG TTCGAGACGCCTGTGCCCGAGGCGGTGGAGAGCGCGTTGACGAAGTGTTTCCTGGAGAAGCATCCTGATGCTGAG GCCTGGTTGCCTGGAAAGGAGGGCGCGCCGCATAGTAGTTATTGGGCAAGGTTGAGGGTGGAACAGGTTTATTGG ATTGGAGGGTTTGGGGGGTTGCAGAGGATTGGGTGGTTGAATGTTAGTGAGTGGAAGGGGATCACGCAGTGGGGG AGTGGTGGCGGTGGGGGTGGATTTGGGGATGGGAGTGGGAGAGGGTGGGGGGATGTGAGGTTGCCTGGGGAGAAG GAGTAA |
Transcript | >Ani_SJS100_1|g5295.t1 ATGATGGCCCGTCCACTCATCACCACCTTCTTCTCCGCACTCGTCCTCCTAACCTATCTCCTCCTCCACGTCGGT GCCAGCCCTCTAGCCGAACAGGCTCCTCTCACCGACACAATCACCAACTACAACCTCGACACCAAAACCGACACC GACACCGACACCCTCATCCCCTCCTCCTCCAACCTCAACACCGACTTCGCCCCACCATCCTGGTTCACCTCGACC CTCCTGGCGCGGCGCCTCCTCGCCCTCTCCCGCACCGGCACCGCCTCCACCATCTTCCCCTCCCCACTGCCCCCC AACTCCCACACGCCCCCCTCCCTGGCAGGCCACTCCACAACCCAAACCGAATACCTGGCCGACTGCGACCCCTAC CTCCCCGCCAACGACACCTCCTCCGAATCCCCCCGTGGGCTCGGCAACCCGACCTTCCTGGCCCTGCACGTGGCC ACCACCTTCCGCAACACCGCCGCGGGATCCAACATCTCGCTCTCGCTCGACTGGTGGGACCACGTCAACGATACC ACCCCCGTGTGGCCCGGGTTCCCGCTCAGCGAGGCCGGATTACCCCGCGTCACGCTGTTCGGGTATGTCGAGCCG TTCGAGACGCCTGTGCCCGAGGCGGTGGAGAGCGCGTTGACGAAGTGTTTCCTGGAGAAGCATCCTGATGCTGAG GCCTGGTTGCCTGGAAAGGAGGGCGCGCCGCATAGTAGTTATTGGGCAAGGTTGAGGGTGGAACAGGTTTATTGG ATTGGAGGGTTTGGGGGGTTGCAGAGGATTGGGTGGTTGAATGTTAGTGAGTGGAAGGGGATCACGCAGTGGGGG AGTGGTGGCGGTGGGGGTGGATTTGGGGATGGGAGTGGGAGAGGGTGGGGGGATGTGAGGTTGCCTGGGGAGAAG GAGTAA |
Gene | >Ani_SJS100_1|g5295.t1 ATGATGGCCCGTCCACTCATCACCACCTTCTTCTCCGCACTCGTCCTCCTAACCTATCTCCTCCTCCACGTCGGT GCCAGCCCTCTAGCCGAACAGGCTCCTCTCACCGACACAATCACCAACTACAACCTCGACACCAAAACCGACACC GACACCGACACCCTCATCCCCTCCTCCTCCAACCTCAACACCGACTTCGCCCCACCATCCTGGTTCACCTCGACC CTCCTGGCGCGGCGCCTCCTCGCCCTCTCCCGCACCGGCACCGCCTCCACCATCTTCCCCTCCCCACTGCCCCCC AACTCCCACACGCCCCCCTCCCTGGCAGGCCACTCCACAACCCAAACCGAATACCTGGCCGACTGCGACCCCTAC CTCCCCGCCAACGACACCTCCTCCGAATCCCCCCGTGGGCTCGGCAACCCGACCTTCCTGGCCCTGCACGTGGCC ACCACCTTCCGCAACACCGCCGCGGGATCCAACATCTCGCTCTCGCTCGACTGGTGGGACCACGTCAACGATACC ACCCCCGTGTGGCCCGGGTTCCCGCTCAGCGAGGCCGGATTACCCCGCGTCACGCTGTTCGGGTATGTCGAGCCG TTCGAGACGCCTGTGCCCGAGGCGGTGGAGAGCGCGTTGACGAAGTGTTTCCTGGAGAAGCATCCTGATGCTGAG GCCTGGTTGCCTGGAAAGGAGGGCGCGCCGCATAGTAGTTATTGGGCAAGGTTGAGGGTGGAACAGGTTTATTGG ATTGGAGGGTTTGGGGGGTTGCAGAGGATTGGGTGGTTGAATGTTAGTGAGTGGAAGGGGATCACGCAGTGGGGG AGTGGTGGCGGTGGGGGTGGATTTGGGGATGGGAGTGGGAGAGGGTGGGGGGATGTGAGGTTGCCTGGGGAGAAG GAGTAA |