Protein ID | Ani_SJS100_1|g5280.t1 |
Gene name | |
Location | scaffold_029:97951..99646 |
Strand | - |
Gene length (bp) | 1695 |
Transcript length (bp) | 1164 |
Coding sequence length (bp) | 1164 |
Protein length (aa) | 388 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08209 | Sgf11 | Sgf11 (transcriptional regulation protein) | 3.7E-10 | 269 | 298 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5280.t1 MAVRASSITPLFPPSASVERPVNPDPNLPSNTLRKTTWSHRSDTGDNRSAFRVLQDIAKMGESNGTEENGSSFPS GTLAKLTCDILNDTFYNIIHDIVAKVHRDEKVSRMRSAVVTARQKADEEASKRREESGKPAGAFKPGDLDLEELK DIHVETDAAVFDEGKVYLKGNPLQTTKEIICPECRLPRLLYPVTGVGARAPPDPYREYCQKQPMINKPGHDVHGN PFATDKLNPKKKKQTNTSNTPASSPPTTPDSSFKQAAPEKVSFPTVKCPNCPRYFVVTRVAQHLDRCLGLSGRQT NRNKTPMENGASTPSSAPPKRPLVDDDVPATLPTKKKKLGAPKKLSGKKPPPPSKLKNGLTPDMAAASDAAGSGD GDIKSEANGDNS* |
Coding | >Ani_SJS100_1|g5280.t1 ATGGCCGTGCGCGCATCGTCTATTACGCCATTGTTCCCTCCATCCGCATCCGTTGAGCGACCGGTAAACCCCGAC CCAAATTTGCCTTCGAACACCCTGCGCAAGACTACATGGAGCCATCGATCTGATACTGGGGATAACCGTTCAGCG TTCAGAGTCCTGCAGGACATTGCCAAAATGGGCGAATCGAACGGAACAGAAGAAAACGGGAGTTCTTTCCCTTCA GGAACACTTGCAAAATTGACATGCGATATCCTCAACGATACCTTCTATAATATAATTCATGATATAGTTGCAAAG GTGCATCGCGACGAAAAGGTCTCCCGTATGCGCTCAGCGGTGGTCACTGCAAGGCAGAAAGCCGATGAAGAGGCA TCCAAACGTCGTGAAGAGAGCGGGAAGCCAGCTGGTGCATTTAAGCCCGGTGATCTCGATCTTGAGGAACTCAAG GACATCCATGTGGAAACCGATGCAGCTGTCTTTGATGAAGGCAAGGTTTACCTCAAGGGAAACCCTCTCCAAACC ACGAAAGAAATTATCTGCCCGGAGTGCCGATTGCCTCGTTTATTGTACCCGGTAACGGGTGTTGGGGCTCGGGCT CCACCAGATCCCTATCGGGAGTATTGTCAGAAGCAGCCGATGATCAACAAGCCGGGGCACGATGTTCATGGAAAC CCGTTCGCCACGGACAAGTTGAACCCGAAGAAGAAGAAACAGACAAATACGTCCAATACTCCAGCTTCAAGTCCT CCCACAACGCCCGACAGTTCCTTTAAACAAGCAGCTCCAGAGAAGGTGTCCTTCCCGACTGTGAAATGCCCGAAC TGCCCGAGATACTTTGTTGTCACTCGAGTTGCACAGCACTTGGACAGATGCCTGGGTTTATCAGGGCGACAGACC AACCGCAACAAGACCCCTATGGAGAATGGTGCCAGTACTCCCAGTTCTGCTCCACCTAAGCGACCATTAGTGGAC GACGACGTCCCAGCAACTCTTCCGACGAAGAAGAAGAAACTAGGAGCCCCGAAAAAACTGTCAGGGAAGAAGCCA CCTCCGCCCAGCAAACTGAAAAACGGTCTTACGCCAGACATGGCCGCGGCAAGTGACGCCGCCGGCTCTGGTGAT GGAGACATCAAGAGTGAAGCGAACGGGGATAACTCTTAA |
Transcript | >Ani_SJS100_1|g5280.t1 ATGGCCGTGCGCGCATCGTCTATTACGCCATTGTTCCCTCCATCCGCATCCGTTGAGCGACCGGTAAACCCCGAC CCAAATTTGCCTTCGAACACCCTGCGCAAGACTACATGGAGCCATCGATCTGATACTGGGGATAACCGTTCAGCG TTCAGAGTCCTGCAGGACATTGCCAAAATGGGCGAATCGAACGGAACAGAAGAAAACGGGAGTTCTTTCCCTTCA GGAACACTTGCAAAATTGACATGCGATATCCTCAACGATACCTTCTATAATATAATTCATGATATAGTTGCAAAG GTGCATCGCGACGAAAAGGTCTCCCGTATGCGCTCAGCGGTGGTCACTGCAAGGCAGAAAGCCGATGAAGAGGCA TCCAAACGTCGTGAAGAGAGCGGGAAGCCAGCTGGTGCATTTAAGCCCGGTGATCTCGATCTTGAGGAACTCAAG GACATCCATGTGGAAACCGATGCAGCTGTCTTTGATGAAGGCAAGGTTTACCTCAAGGGAAACCCTCTCCAAACC ACGAAAGAAATTATCTGCCCGGAGTGCCGATTGCCTCGTTTATTGTACCCGGTAACGGGTGTTGGGGCTCGGGCT CCACCAGATCCCTATCGGGAGTATTGTCAGAAGCAGCCGATGATCAACAAGCCGGGGCACGATGTTCATGGAAAC CCGTTCGCCACGGACAAGTTGAACCCGAAGAAGAAGAAACAGACAAATACGTCCAATACTCCAGCTTCAAGTCCT CCCACAACGCCCGACAGTTCCTTTAAACAAGCAGCTCCAGAGAAGGTGTCCTTCCCGACTGTGAAATGCCCGAAC TGCCCGAGATACTTTGTTGTCACTCGAGTTGCACAGCACTTGGACAGATGCCTGGGTTTATCAGGGCGACAGACC AACCGCAACAAGACCCCTATGGAGAATGGTGCCAGTACTCCCAGTTCTGCTCCACCTAAGCGACCATTAGTGGAC GACGACGTCCCAGCAACTCTTCCGACGAAGAAGAAGAAACTAGGAGCCCCGAAAAAACTGTCAGGGAAGAAGCCA CCTCCGCCCAGCAAACTGAAAAACGGTCTTACGCCAGACATGGCCGCGGCAAGTGACGCCGCCGGCTCTGGTGAT GGAGACATCAAGAGTGAAGCGAACGGGGATAACTCTTAA |
Gene | >Ani_SJS100_1|g5280.t1 ATGGCCGTGCGCGCAGTCCGCTGATTCTCCCTACCGTGGGTGTTTCCCGCCCCCGGGTTATAGACGCCATTCACT CCCCACCAGACAGATGGACTCTACGTGTTATTGTCCCTGTGTACCATTTCTTTGAGACATTCCTTTTCAGTGGGA GTTGGGCACTTGCTTTATTGCTCCCTTGTTCGGACCAACACAGTCGGGTAGTCGTCTATTACGCCATTGTTCCCT CCATCCGCATCCGTTGAGCGACCGGTAAACCCCGACCCAAATTTGCCTTCGAACACCCTGCGCAAGACTACATGG AGCCATCGATCTGATACTGGGGATAACCGTTCAGCGTTGTGTGGGAGGAGCTTTTCTATCGACTGCAAGTTCCGC TTTAATTGGCGCGTAATTACTTTGCATACACCAGCAGAGGTATGTCTTGAGTGTTGTCTTGGACTTTGCAGTATC TGCGCAACCATTGCGTTATTTCATCGGTACTGCTTGCTATCGAGTACATTATCACGTCGTAATCGATATCTTGGG CTACCCTACTCATCTGCATTTCCTGATCGCTTGTTTCCTCAATCGCTCAGTCTTCGAAGATACTTCGGCTCTAAC AATTTCCAGTCCTGCAGGACATTGCCAAAATGGGCGAATCGAACGGAACAGAAGAAAACGGGAGTTCTTTCCCTT CAGGAACACTTGCAAAATTGGTACGTTCATGCCCGTATGCTTCCGTCTGCGGGACAGTAGCGTCTCTGGGCTTTC GTCAATGGATCCTGACAACACCAGACATGCGATATCCTCAACGATACCTTCTATAATATAATTCATGATATAGTT GCAAAGGTGCATCGCGACGAAAAGGTCTCCCGTATGCGCTCAGCGGTGGTCACTGCAAGGCAGAAAGCCGATGAA GAGGCATCCAAACGTCGTGAAGAGAGCGGGAAGCCAGCTGGTGCATTTAAGCCCGGTGATCTCGATCTTGAGGAA CTCAAGGACATCCATGTGGAAACCGATGCAGCTGTCTTTGATGAAGGCAAGGTTTACCTCAAGGGAAACCCTCTC CAAACCACGAAAGAAATTATCTGCCCGGAGTGCCGATTGCCTCGTTTATTGTACCCGGTAACGGGTGTTGGGGCT CGGGCTCCACCAGATCCCTATCGGGAGTATTGTCAGAAGCAGCCGATGATCAACAAGCCGGGGCACGATGTTCAT GGAAACCCGTTCGCCACGGACAAGTTGAACCCGAAGAAGAAGAAACAGACAAATACGTCCAATACTCCAGCTTCA AGTCCTCCCACAACGCCCGACAGTTCCTTTAAACAAGCAGCTCCAGAGAAGGTGTCCTTCCCGACTGTGAAATGC CCGAACTGCCCGAGATACTTTGTTGTCACTCGAGTTGCACAGCACTTGGACAGATGCCTGGGTTTATCAGGGCGA CAGACCAACCGCAACAAGACCCCTATGGAGAATGGTGCCAGTACTCCCAGTTCTGCTCCACCTAAGCGACCATTA GTGGACGACGACGTCCCAGCAACTCTTCCGACGAAGAAGAAGAAACTAGGAGCCCCGAAAAAACTGTCAGGGAAG AAGCCACCTCCGCCCAGCAAACTGAAAAACGGTCTTACGCCAGACATGGCCGCGGCAAGTGACGCCGCCGGCTCT GGTGATGGAGACATCAAGAGTGAAGCGAACGGGGATAACTCTTAA |