© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g5276.t1 |
| Gene name | |
| Location | scaffold_029:89285..91129 |
| Strand | + |
| Gene length (bp) | 1844 |
| Transcript length (bp) | 1746 |
| Coding sequence length (bp) | 1746 |
| Protein length (aa) | 582 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.1E-40 | 88 | 489 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.6E-10 | 118 | 262 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 82 | 104 | 22 |
| 2 | 119 | 141 | 22 |
| 3 | 148 | 170 | 22 |
| 4 | 174 | 196 | 22 |
| 5 | 203 | 225 | 22 |
| 6 | 235 | 257 | 22 |
| 7 | 278 | 300 | 22 |
| 8 | 304 | 326 | 22 |
| 9 | 347 | 369 | 22 |
| 10 | 384 | 406 | 22 |
| 11 | 413 | 435 | 22 |
| 12 | 440 | 462 | 22 |
| 13 | 475 | 497 | 22 |
| 14 | 543 | 565 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5276.t1 MDAANVQKQQGSFAELKPFKVTQTEGNGSARSKDSTLVDSARDISPHSQTVEAKHEPKTPSLIHSHEDAEPQPEY PTSWRLALIVIGLCLSIFCMALDNTILATAIPKITDQFQSLGDVGWYGSSYLLTTCCLILAFGKLYTFYSTKWVY LMGLAIFEIGSLICGVAPNSVALIIGRAIAGLGAAGVFSGAMIIISQTAPLKWRPFLTGSITSMYGIASVAGPLM GGAFTDHVSWRWCFYINLPIGGATIFFILIFFKAPKSVKSTTGLKDKLSQFDLPGTFVFLPGVICVLLALQWGGT TYEWGNGRIIALLVLFGVLIGIFIVLQMWGNEKATIPPRLIRNRNVWGAALFSFCVGGSFFVAVYYLPIWFQAIK GVSATKSGIMNLPMLLSVVIFSIVAGGLVSTFGYYTPFMLIAPAFIAIGGGLLSTMGVHSSTGHWIGYQIIFGVG AGLGMQQPMMVVQAALKIADVPSATAIVAFTQTLGGALFVSVAQNVFQNELRKNLSQISGVDPASVMQAGATMLR HVVSADQLPAVLEAYNGAVTTTFYVAVAMGALSIFGALPIQWISVKGKKMGPPAAA* |
| Coding | >Ani_SJS100_1|g5276.t1 ATGGATGCTGCCAACGTTCAGAAGCAGCAGGGATCATTTGCTGAACTGAAACCATTTAAGGTCACGCAGACAGAG GGAAACGGTTCCGCTAGAAGCAAAGACAGTACACTCGTCGACTCTGCGCGAGATATCTCCCCTCACTCACAGACG GTCGAAGCAAAGCATGAGCCCAAAACACCCAGCTTGATACATAGCCATGAAGATGCGGAACCTCAGCCGGAATAT CCCACTTCGTGGAGACTCGCGCTGATCGTGATCGGGCTCTGTCTTTCGATCTTCTGCATGGCTTTGGACAACACC ATTCTGGCGACTGCAATCCCCAAAATCACAGACCAATTCCAGTCACTCGGTGACGTGGGTTGGTACGGCAGTTCC TACCTCCTTACAACGTGCTGCCTCATCCTAGCCTTTGGCAAGCTGTACACTTTCTACTCCACCAAATGGGTCTAT CTGATGGGGCTCGCGATCTTCGAGATTGGTTCTCTGATCTGCGGAGTGGCTCCCAACTCGGTTGCGCTGATTATC GGACGGGCGATAGCTGGCCTTGGGGCCGCCGGAGTTTTCTCGGGAGCCATGATCATTATCTCGCAGACTGCACCG CTCAAATGGAGGCCTTTCCTGACCGGTTCTATCACCTCCATGTATGGAATTGCCAGCGTAGCAGGGCCCCTGATG GGTGGTGCGTTCACAGATCATGTCAGCTGGCGATGGTGTTTCTATATCAACCTTCCCATTGGCGGCGCGACCATC TTCTTCATCCTGATATTCTTCAAGGCACCCAAATCAGTCAAGAGTACCACGGGGCTTAAGGATAAGCTGTCGCAG TTTGACCTGCCTGGTACATTTGTCTTTTTACCAGGAGTCATCTGCGTCTTGCTCGCACTGCAATGGGGCGGGACC ACTTACGAATGGGGGAATGGTCGCATCATCGCCCTGCTGGTGTTGTTCGGGGTCCTCATCGGTATATTCATAGTG CTACAGATGTGGGGTAACGAGAAAGCCACAATCCCTCCGCGACTTATCAGGAATCGAAACGTATGGGGCGCTGCA CTGTTCAGCTTCTGCGTTGGCGGTTCATTTTTCGTGGCTGTCTATTACCTCCCCATCTGGTTCCAGGCCATCAAA GGTGTTAGCGCCACCAAATCCGGCATCATGAACCTCCCTATGCTGCTCAGCGTCGTCATTTTCTCCATCGTAGCA GGCGGCCTGGTCTCCACATTCGGATACTACACCCCATTCATGCTGATAGCCCCAGCCTTCATCGCCATCGGCGGC GGCCTTCTCTCCACTATGGGCGTGCACTCCTCGACGGGCCACTGGATCGGATACCAGATCATCTTCGGCGTGGGA GCAGGCCTGGGCATGCAACAGCCGATGATGGTGGTGCAGGCGGCGCTGAAAATCGCCGATGTGCCCAGCGCGACG GCTATCGTGGCGTTCACGCAGACACTGGGAGGAGCATTGTTCGTCTCCGTGGCGCAGAACGTCTTCCAGAATGAA CTGCGCAAGAACCTGTCACAGATATCGGGCGTTGATCCTGCTTCTGTCATGCAGGCCGGGGCAACGATGCTACGA CATGTCGTATCTGCGGACCAGCTGCCCGCCGTGCTGGAGGCATATAATGGAGCCGTGACCACAACGTTCTATGTA GCGGTGGCTATGGGAGCATTAAGTATCTTTGGGGCGTTGCCTATTCAGTGGATTTCTGTGAAGGGGAAGAAGATG GGACCGCCGGCAGCAGCATAA |
| Transcript | >Ani_SJS100_1|g5276.t1 ATGGATGCTGCCAACGTTCAGAAGCAGCAGGGATCATTTGCTGAACTGAAACCATTTAAGGTCACGCAGACAGAG GGAAACGGTTCCGCTAGAAGCAAAGACAGTACACTCGTCGACTCTGCGCGAGATATCTCCCCTCACTCACAGACG GTCGAAGCAAAGCATGAGCCCAAAACACCCAGCTTGATACATAGCCATGAAGATGCGGAACCTCAGCCGGAATAT CCCACTTCGTGGAGACTCGCGCTGATCGTGATCGGGCTCTGTCTTTCGATCTTCTGCATGGCTTTGGACAACACC ATTCTGGCGACTGCAATCCCCAAAATCACAGACCAATTCCAGTCACTCGGTGACGTGGGTTGGTACGGCAGTTCC TACCTCCTTACAACGTGCTGCCTCATCCTAGCCTTTGGCAAGCTGTACACTTTCTACTCCACCAAATGGGTCTAT CTGATGGGGCTCGCGATCTTCGAGATTGGTTCTCTGATCTGCGGAGTGGCTCCCAACTCGGTTGCGCTGATTATC GGACGGGCGATAGCTGGCCTTGGGGCCGCCGGAGTTTTCTCGGGAGCCATGATCATTATCTCGCAGACTGCACCG CTCAAATGGAGGCCTTTCCTGACCGGTTCTATCACCTCCATGTATGGAATTGCCAGCGTAGCAGGGCCCCTGATG GGTGGTGCGTTCACAGATCATGTCAGCTGGCGATGGTGTTTCTATATCAACCTTCCCATTGGCGGCGCGACCATC TTCTTCATCCTGATATTCTTCAAGGCACCCAAATCAGTCAAGAGTACCACGGGGCTTAAGGATAAGCTGTCGCAG TTTGACCTGCCTGGTACATTTGTCTTTTTACCAGGAGTCATCTGCGTCTTGCTCGCACTGCAATGGGGCGGGACC ACTTACGAATGGGGGAATGGTCGCATCATCGCCCTGCTGGTGTTGTTCGGGGTCCTCATCGGTATATTCATAGTG CTACAGATGTGGGGTAACGAGAAAGCCACAATCCCTCCGCGACTTATCAGGAATCGAAACGTATGGGGCGCTGCA CTGTTCAGCTTCTGCGTTGGCGGTTCATTTTTCGTGGCTGTCTATTACCTCCCCATCTGGTTCCAGGCCATCAAA GGTGTTAGCGCCACCAAATCCGGCATCATGAACCTCCCTATGCTGCTCAGCGTCGTCATTTTCTCCATCGTAGCA GGCGGCCTGGTCTCCACATTCGGATACTACACCCCATTCATGCTGATAGCCCCAGCCTTCATCGCCATCGGCGGC GGCCTTCTCTCCACTATGGGCGTGCACTCCTCGACGGGCCACTGGATCGGATACCAGATCATCTTCGGCGTGGGA GCAGGCCTGGGCATGCAACAGCCGATGATGGTGGTGCAGGCGGCGCTGAAAATCGCCGATGTGCCCAGCGCGACG GCTATCGTGGCGTTCACGCAGACACTGGGAGGAGCATTGTTCGTCTCCGTGGCGCAGAACGTCTTCCAGAATGAA CTGCGCAAGAACCTGTCACAGATATCGGGCGTTGATCCTGCTTCTGTCATGCAGGCCGGGGCAACGATGCTACGA CATGTCGTATCTGCGGACCAGCTGCCCGCCGTGCTGGAGGCATATAATGGAGCCGTGACCACAACGTTCTATGTA GCGGTGGCTATGGGAGCATTAAGTATCTTTGGGGCGTTGCCTATTCAGTGGATTTCTGTGAAGGGGAAGAAGATG GGACCGCCGGCAGCAGCATAA |
| Gene | >Ani_SJS100_1|g5276.t1 ATGGATGCTGCCAACGTTCAGAAGCAGCAGGGATCATTTGCTGAACTGAAACCATTTAAGGTCACGCAGACAGAG GGAAACGGTTCCGCTAGAAGCAAAGACAGTACACTCGTCGACTCTGCGCGAGATATCTCCCCTCACTCACAGACG GTCGAAGCAAAGCATGAGCCCAAAACACCCAGCTTGATACATAGCCATGAAGATGCGGAACCTCAGCCGGAATAT CCCACTTCGTGGAGACTCGCGCTGATCGTGATCGGGCTCTGTCTTTCGATCTTCTGCATGGCTTTGGTGAGTATT CCAAGTACATACGCAAGCGGTCGTGCTAATGGCATCAGGACAACACCATTCTGGCGACTGCAATCCCCAAAATCA CAGACCAATTCCAGTCACTCGGTGACGTGGGTTGGTACGGCAGTTCCTACCTCCTTACAACGTGCTGCCTCATCC TAGCCTTTGGCAAGCTGTACACTTTCTACTCCACCAAATGGGTCTATCTGATGGGGCTCGCGATCTTCGAGATTG GTTCTCTGATCTGCGGAGTGGCTCCCAACTCGGTTGCGCTGATTATCGGACGGGCGATAGCTGGCCTTGGGGCCG CCGGAGTTTTCTCGGGAGCCATGATCATTATCTCGCAGACTGCACCGCTCAAATGGAGGCCTTTCCTGACCGGTT CTATCACCTCCATGTATGGAATTGCCAGCGTAGCAGGGCCCCTGATGGGTGGTGCGTTCACAGATCATGTCAGCT GGCGATGGTGTTTCTATATCAACCTTCCCATTGGCGGCGCGACCATCTTCTTCATCCTGATATTCTTCAAGGCAC CCAAATCAGTCAAGAGTACCACGGGGCTTAAGGATAAGCTGTCGCAGTTTGACCTGCCTGGTACATTTGTCTTTT TACCAGGAGTCATCTGCGTCTTGCTCGCACTGCAATGGGGCGGGACCACTTACGAATGGGGGAATGGTCGCATCA TCGCCCTGCTGGTGTTGTTCGGGGTCCTCATCGGTATATTCATAGTGCTACAGATGTGGGGTAACGAGAAAGCCA CAATCCCTCCGCGACTTATCAGGAATCGAAACGTATGGGGCGCTGCACTGTTCAGCTTCTGCGTTGGCGGTTCAT TTTTCGTGGCTGTCTATTACGTGCGTGACCCTCCTTTCATATTCCTTTAGAAACCTGCTAACATCCACCAGCTCC CCATCTGGTTCCAGGCCATCAAAGGTGTTAGCGCCACCAAATCCGGCATCATGAACCTCCCTATGCTGCTCAGCG TCGTCATTTTCTCCATCGTAGCAGGCGGCCTGGTCTCCACATTCGGATACTACACCCCATTCATGCTGATAGCCC CAGCCTTCATCGCCATCGGCGGCGGCCTTCTCTCCACTATGGGCGTGCACTCCTCGACGGGCCACTGGATCGGAT ACCAGATCATCTTCGGCGTGGGAGCAGGCCTGGGCATGCAACAGCCGATGATGGTGGTGCAGGCGGCGCTGAAAA TCGCCGATGTGCCCAGCGCGACGGCTATCGTGGCGTTCACGCAGACACTGGGAGGAGCATTGTTCGTCTCCGTGG CGCAGAACGTCTTCCAGAATGAACTGCGCAAGAACCTGTCACAGATATCGGGCGTTGATCCTGCTTCTGTCATGC AGGCCGGGGCAACGATGCTACGACATGTCGTATCTGCGGACCAGCTGCCCGCCGTGCTGGAGGCATATAATGGAG CCGTGACCACAACGTTCTATGTAGCGGTGGCTATGGGAGCATTAAGTATCTTTGGGGCGTTGCCTATTCAGTGGA TTTCTGTGAAGGGGAAGAAGATGGGACCGCCGGCAGCAGCATAA |