Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5256.t1
Gene name
Locationscaffold_029:12492..12887
Strand+
Gene length (bp)395
Transcript length (bp)300
Coding sequence length (bp)300
Protein length (aa) 100

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 10 29 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5256.t1
MASNQKVRRIVLTGAVTVITIAGSLYGAGIKTGQQVTQQAKKSQEVTIDDRIDGLRSMRQNLVSKKELVEKQLRD
LDVKIEERKLKNMDGPKREPPNYK*
Coding >Ani_SJS100_1|g5256.t1
ATGGCATCGAATCAGAAGGTTCGCCGGATTGTCCTTACGGGCGCTGTCACGGTCATAACTATTGCTGGGTCGCTT
TACGGTGCTGGCATTAAGACCGGGCAACAGGTTACTCAGCAAGCCAAAAAGTCCCAAGAGGTCACCATTGATGAC
CGAATCGACGGCCTCCGAAGCATGCGACAGAATCTGGTATCGAAGAAGGAGCTCGTCGAAAAGCAGCTCCGCGAC
CTGGACGTGAAGATCGAGGAAAGGAAGTTGAAGAATATGGACGGGCCAAAGAGGGAGCCACCGAATTATAAGTAA
Transcript >Ani_SJS100_1|g5256.t1
ATGGCATCGAATCAGAAGGTTCGCCGGATTGTCCTTACGGGCGCTGTCACGGTCATAACTATTGCTGGGTCGCTT
TACGGTGCTGGCATTAAGACCGGGCAACAGGTTACTCAGCAAGCCAAAAAGTCCCAAGAGGTCACCATTGATGAC
CGAATCGACGGCCTCCGAAGCATGCGACAGAATCTGGTATCGAAGAAGGAGCTCGTCGAAAAGCAGCTCCGCGAC
CTGGACGTGAAGATCGAGGAAAGGAAGTTGAAGAATATGGACGGGCCAAAGAGGGAGCCACCGAATTATAAGTAA
Gene >Ani_SJS100_1|g5256.t1
ATGGCATCGAATCAGAAGGTTCGCCGGATTGTCCTTACGGGCGCTGTCACGGTCATAACTATTGCTGGGTCGCTT
TACGGTGCTGGCATTAAGACCGGGCAACAGGTTACTCAGGTAATATTCTCCAGCCATTACGTTAGCGGTTATTGG
CTTTTACATTTGGTTCTATGGGAAATTATAAGCGCTGATACGGTGGTCATGGTATATAGCAAGCCAAAAAGTCCC
AAGAGGTCACCATTGATGACCGAATCGACGGCCTCCGAAGCATGCGACAGAATCTGGTATCGAAGAAGGAGCTCG
TCGAAAAGCAGCTCCGCGACCTGGACGTGAAGATCGAGGAAAGGAAGTTGAAGAATATGGACGGGCCAAAGAGGG
AGCCACCGAATTATAAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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