© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5230.t1 |
| Gene name | |
| Location | scaffold_028:300161..303330 |
| Strand | + |
| Gene length (bp) | 3169 |
| Transcript length (bp) | 1737 |
| Coding sequence length (bp) | 1737 |
| Protein length (aa) | 579 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.5E-06 | 43 | 130 |
| PF13520 | AA_permease_2 | Amino acid permease | 3.2E-28 | 136 | 357 |
| PF00324 | AA_permease | Amino acid permease | 3.1E-13 | 140 | 357 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 61 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 43 | 63 | 20 |
| 2 | 78 | 100 | 22 |
| 3 | 121 | 138 | 17 |
| 4 | 143 | 165 | 22 |
| 5 | 231 | 250 | 19 |
| 6 | 275 | 297 | 22 |
| 7 | 333 | 355 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5230.t1 MTADLDRKGTIVSLESIQDGEIGILDSDVATPGINGDGMPRQFNWLSTLGISFSITNSWAGYMSNFGQILAYGGP RLVIFGSICAFVVQIIVILGLSELASAFPSSGGQYYFCYMLSPTKSKRFSAFVVGLIPIFLAPSKVNWTAQTALF LSLTGMALIIIITLGMCQEKQPASFLLQPGYGRSGWNEGTAWMLGVMNTMYSMTGIDAAIHISEELPQPEKRVPQ AMTMSVILSLATCLPLSVALVFCMSDMEAVVNSELPSLELIYQATKSKGVTTFLSVWLLIVYAASIPSQWVICGR IAWALARDINSPSARYFAKVDDKLKFPVRTTVASFGFVAIYSLLYLVSSGAFNIITNKSLLRLAACSINKQAAYS RQRSNPTVDSHLSSQESLPAMDAHLDLTLPSTCPELHQGSNANWDDASFALYSMVGLSSEDLDKLTTALNREWKQ EMTDEAMPLVRTPTVYDFKGESLRDVVRAHVELDKEFTPRDDGGAEGDIHWYPTAFVVVTTREWEEQGLLLVYAG VEEKECPMDKFFFHIDVANVMLSNFEFRRRRALIMQVQLGIRAWNDSWHKMIA* |
| Coding | >Ani_SJS100_1|g5230.t1 ATGACAGCGGATTTGGATCGAAAAGGTACCATCGTGAGCCTCGAGAGCATCCAAGATGGCGAAATCGGCATTCTC GATTCGGATGTGGCCACCCCCGGAATTAATGGGGATGGAATGCCGCGACAGTTCAATTGGCTTTCAACCCTTGGA ATTTCTTTCTCGATCACGAACTCCTGGGCAGGGTACATGAGCAACTTTGGCCAGATCCTGGCTTATGGCGGTCCT CGACTAGTGATATTTGGATCTATCTGCGCCTTTGTCGTTCAAATCATTGTAATTCTCGGACTTAGTGAGCTGGCA TCGGCCTTTCCGTCAAGTGGAGGTCAGTATTATTTTTGCTACATGCTCAGTCCGACCAAGTCGAAAAGGTTTTCT GCATTCGTTGTCGGATTGATACCGATATTCTTGGCTCCGAGTAAAGTCAACTGGACGGCTCAGACGGCTCTCTTC CTATCCCTTACGGGCATGGCCCTCATTATCATTATCACACTGGGTATGTGCCAGGAAAAACAACCAGCATCTTTT CTGCTGCAACCTGGATACGGGAGATCTGGCTGGAACGAAGGTACTGCGTGGATGCTGGGCGTGATGAATACGATG TATTCTATGACTGGGATCGATGCTGCTATTCACATTAGCGAAGAGCTCCCTCAACCAGAGAAGCGTGTTCCTCAG GCCATGACAATGAGTGTAATTCTGAGTCTCGCTACCTGTCTTCCATTGTCTGTTGCACTGGTGTTCTGCATGTCC GACATGGAAGCGGTTGTGAACTCGGAACTCCCAAGCTTGGAACTGATCTATCAGGCCACGAAGAGCAAAGGCGTT ACTACCTTTCTGTCAGTGTGGCTCTTGATTGTCTATGCTGCCTCAATCCCGTCCCAATGGGTGATTTGCGGCAGG ATTGCATGGGCTTTGGCGCGCGATATTAACTCCCCGTCAGCAAGATACTTTGCCAAAGTTGACGACAAGCTAAAG TTCCCTGTTCGTACCACGGTCGCTAGCTTTGGCTTTGTCGCTATCTATAGCCTGCTATACTTGGTTTCCTCAGGC GCTTTCAACATTATTACCAATAAAAGTCTGCTACGCCTCGCAGCTTGTTCCATCAACAAGCAAGCCGCATACTCC AGACAACGCTCAAATCCCACCGTGGACTCACATCTCTCTAGCCAAGAATCGCTCCCAGCCATGGATGCTCACCTT GATCTCACTCTGCCTTCGACCTGCCCGGAACTTCACCAAGGCAGTAATGCCAACTGGGACGATGCCTCTTTTGCT CTCTATTCCATGGTCGGACTGTCTTCCGAGGACTTGGATAAGCTTACCACCGCCTTAAACCGGGAGTGGAAGCAG GAGATGACTGACGAAGCGATGCCGCTTGTTCGCACCCCTACCGTGTACGACTTCAAAGGGGAAAGCCTCCGAGAC GTTGTCCGGGCTCATGTGGAGCTGGACAAGGAATTCACTCCGCGTGATGATGGTGGTGCGGAAGGCGACATTCAT TGGTACCCCACGGCTTTTGTCGTTGTCACCACTCGCGAGTGGGAAGAACAAGGACTCTTGTTGGTGTACGCGGGC GTCGAGGAGAAGGAATGTCCCATGGACAAGTTTTTTTTCCACATCGACGTCGCTAATGTCATGTTGTCAAACTTT GAATTTCGGCGACGCAGGGCCCTCATCATGCAAGTTCAATTGGGAATTAGGGCATGGAATGATAGCTGGCATAAA ATGATAGCTTAG |
| Transcript | >Ani_SJS100_1|g5230.t1 ATGACAGCGGATTTGGATCGAAAAGGTACCATCGTGAGCCTCGAGAGCATCCAAGATGGCGAAATCGGCATTCTC GATTCGGATGTGGCCACCCCCGGAATTAATGGGGATGGAATGCCGCGACAGTTCAATTGGCTTTCAACCCTTGGA ATTTCTTTCTCGATCACGAACTCCTGGGCAGGGTACATGAGCAACTTTGGCCAGATCCTGGCTTATGGCGGTCCT CGACTAGTGATATTTGGATCTATCTGCGCCTTTGTCGTTCAAATCATTGTAATTCTCGGACTTAGTGAGCTGGCA TCGGCCTTTCCGTCAAGTGGAGGTCAGTATTATTTTTGCTACATGCTCAGTCCGACCAAGTCGAAAAGGTTTTCT GCATTCGTTGTCGGATTGATACCGATATTCTTGGCTCCGAGTAAAGTCAACTGGACGGCTCAGACGGCTCTCTTC CTATCCCTTACGGGCATGGCCCTCATTATCATTATCACACTGGGTATGTGCCAGGAAAAACAACCAGCATCTTTT CTGCTGCAACCTGGATACGGGAGATCTGGCTGGAACGAAGGTACTGCGTGGATGCTGGGCGTGATGAATACGATG TATTCTATGACTGGGATCGATGCTGCTATTCACATTAGCGAAGAGCTCCCTCAACCAGAGAAGCGTGTTCCTCAG GCCATGACAATGAGTGTAATTCTGAGTCTCGCTACCTGTCTTCCATTGTCTGTTGCACTGGTGTTCTGCATGTCC GACATGGAAGCGGTTGTGAACTCGGAACTCCCAAGCTTGGAACTGATCTATCAGGCCACGAAGAGCAAAGGCGTT ACTACCTTTCTGTCAGTGTGGCTCTTGATTGTCTATGCTGCCTCAATCCCGTCCCAATGGGTGATTTGCGGCAGG ATTGCATGGGCTTTGGCGCGCGATATTAACTCCCCGTCAGCAAGATACTTTGCCAAAGTTGACGACAAGCTAAAG TTCCCTGTTCGTACCACGGTCGCTAGCTTTGGCTTTGTCGCTATCTATAGCCTGCTATACTTGGTTTCCTCAGGC GCTTTCAACATTATTACCAATAAAAGTCTGCTACGCCTCGCAGCTTGTTCCATCAACAAGCAAGCCGCATACTCC AGACAACGCTCAAATCCCACCGTGGACTCACATCTCTCTAGCCAAGAATCGCTCCCAGCCATGGATGCTCACCTT GATCTCACTCTGCCTTCGACCTGCCCGGAACTTCACCAAGGCAGTAATGCCAACTGGGACGATGCCTCTTTTGCT CTCTATTCCATGGTCGGACTGTCTTCCGAGGACTTGGATAAGCTTACCACCGCCTTAAACCGGGAGTGGAAGCAG GAGATGACTGACGAAGCGATGCCGCTTGTTCGCACCCCTACCGTGTACGACTTCAAAGGGGAAAGCCTCCGAGAC GTTGTCCGGGCTCATGTGGAGCTGGACAAGGAATTCACTCCGCGTGATGATGGTGGTGCGGAAGGCGACATTCAT TGGTACCCCACGGCTTTTGTCGTTGTCACCACTCGCGAGTGGGAAGAACAAGGACTCTTGTTGGTGTACGCGGGC GTCGAGGAGAAGGAATGTCCCATGGACAAGTTTTTTTTCCACATCGACGTCGCTAATGTCATGTTGTCAAACTTT GAATTTCGGCGACGCAGGGCCCTCATCATGCAAGTTCAATTGGGAATTAGGGCATGGAATGATAGCTGGCATAAA ATGATAGCTTAG |
| Gene | >Ani_SJS100_1|g5230.t1 ATGACAGCGGATTTGGATCGAAAAGGTACCATCGTGAGCCTCGAGAGCATCCAAGATGGCGAAATCGGCATTCTC GATTCGGATGTGGCCACCCCCGGAATTAATGGGGATGGAATGCCGCGACAGTTCAATTGGCTTTCAACCCTTGGA ATTTCTTTCTCGATCACGAACTCCTGGGCAGGGTACATGGTAAGCATTTATGCCAATGCGCCAGTGATATCTTCT GAAGCGTACAATGTATGCAGAGCAACTTTGGCCAGATCCTGGCTTATGGCGGTCCTCGACTAGTGATATTTGGAT CTATCTGCGCCTTTGTCGTTCAAATCATTGTAATTCTCGGACTTAGTGAGCTGGCATCGGCCTTTCCGGTATGCT CTCTGCTATTGTGTTCTTGAGCCTTGTTATGATCGCATGGCTCACAGGACTAGTCAAGTGGAGGTCAGTATTATT TTTGCTACATGCTCAGTCCGACCAAGTCGAAAAGGTTTTCTGCATTCGTTGTCGGATGTATGTCTGTCTTAGCAT GGTGGATAGTGACGTGGGTTGCACTGCCCCAGATCCGCCGATCGACAAGGTCCTGATGATCGTTGCAGATCTTCC GGTATCCAGATGGTTACGGCCTCCGTTGGGGGAATAGTCAAGTTTTGGCACACAGAGTATATGGCGGCCCAATGG CACATATACCTGATATATCTTGCTATATCACTGCTCACACGTGAGGATCACTGTCCAAGATGGCAACTCGGAGTA GCTAACCCACTAGTGATACCGATATTCTTGGCTCCGAGTAAAGTCAACTGGACGGCTCAGACGGCTCTCTTCCTA TCCCTTACGGGCATGGCCCTCATTATCATTATCACACTGGGTATGTGCCAGGAAAAACAACCAGCATCTTTTCTG CTGCAACCTGGATACGGGAGATCTGGCTGGAACGAAGGTACTGCGTGGATGCTGGGCGTGATGAATACGATGTAT TCTATGACTGGGATCGATGCTGGTATGTCTGTATCCGTGAGCCACAATAACTTTTGTCGCCTACTGACCGACCGA TGATACCCCAGCTATTCACATTAGCGAAGAGCTCCCTCAACCAGAGAAGCGTGTTCCTCAGGCCATGACAATGAG TGTAATTCTGAGTCTCGCTACCTGTCTTCCATTGTCTGTTGCACTGGTGTTCTGCATGTCCGACATGGAAGCGGT TGTGAACTCGGAACTCCCAAGCTTGGAACTGATCTATCAGGCGTATGTATTTGAGCTGACCTCTTTGATAAACTA ATCCTAACTGCTATGTTCAGCACGAAGAGCAAAGGCGTTACTACCTTTCTGTCAGTGTGGCTCTTGATTGTCTAT GCTGGTAAGTCCGCGGACACCTTCACATGCGCCAATTGAGCTGACCGCCAAAATATAGCCTCAATCCCGTCCCAA TGGGTGATTTGCGGCAGGATTGCATGGGCTTTGGCGCGCGATGTAAGCGCCTGTATAACACACTGATGGTTCCAA GTTGACTCGACCAGATTAACTCCCCGTCAGCAAGATACTTTGCCAAAGTTGACGACAAGCTAAAGTTCCCTGTTC GTACCACGGTCGCTAGCTTTGGCTTTGTCGCTATCTATAGCCTGCTATACTTGGTTTCCTCAGGCGCTTTCAACA TTATTACCAATAGTGCGATTCTCTTCCTCCACATAACTTACGTGGTACCTCAGGGAATAGTTTTGATTTCAGGAA GAGTGCGCACACTACCACGTCGATATTTGAACCTCGGCTGCCTCGGCTATCTCTGCAACGCCTTTGTCATCTTGT GGATTGTTATACTTGGAGTGTTTGTCTGCCTGCCCCTTGGGTTACCGGTAGAAGCCGAGTCGATGAATTATACAT CTCCCGTGCTAATTGGTCTGTTTGGCCTTGTGATCATGTTGTGGTATGGGCTAGGAAGGATAGCATTTCAGGGAC CCCAGATTGACAGGGGCATTATGCAGGAGGTAGATTCTGGTCTCAAGTGAGCGGAGTTGGTTGAGCTGGTGGCTC GCAACGGACGTGGCAGTCAGCCATTGCTTCCAGACTTGGAAATTTGTGAAACCTCAACGACGCGAGACTGCAGTC AAAACCTTGCTCACTTTGCCTGCGCCGACTTGACACGTGATGGAACGTACGAAGTCAGCAAGTTATATTTGATAC TCTATACCGTGAGCGGGAACAGACGGTCTGGATACTGCTTCGAGGTCTGTACGACAGTGATAAGAGAGACTCTCC GATAGACAAAGTGTGTCCTGAGTACAGACCCCGTCATTCCGAGACATTGAACGGGTGCAATGTAACTCGGGCATT CACTTCGGAAAGGTGGCATAAATGTTGCCTGCGTCAGAGTGGCATCAACCGCCCTTTTGCTACAAAGATCACCCC CGTCCCCTCCCCTTTCCCCTCCTATTTATTCCTTGTACGATTTCATTTCATCCACCATCTCCGTCCCTCCCTCTT TCCCCTGCAGGACATAACCACTTCTTTAGAAAGTCTGCTACGCCTCGCAGCTTGTTCCATCAACAAGCAAGCCGC ATACTCCAGACAACGCTCAAATCCCACCGTGGACTCACATCTCTCTAGCCAAGAATCGCTCCCAGCCATGGATGC TCACCTTGATCTCACTCTGCCTTCGACCTGCCCGGAACTTCACCAAGGCAGTAATGCCAACTGGGACGATGCCTC TTTTGCTCTCTATTCCATGGTCGGACTGTCTTCCGAGGACTTGGATAAGCTTACCACCGCCTTAAACCGGGAGTG GAAGCAGGAGATGACTGACGAAGCGATGCCGCTTGTTCGCACCCCTACCGTGTACGACTTCAAAGGGGAAAGCCT CCGAGACGTTGTCCGGGCTCATGTGGAGCTGGACAAGGAATTCACTCCGCGTGATGATGGTGGTGCGGAAGGCGA CATTCATTGGTACCCCACGGCTTTTGTCGTTGTCACCACTCGCGAGTGGGAAGAACAAGGACTCTTGTTGGTGTA CGCGGGCGTCGAGGAGAAGGAATGTCCCATGGACAAGTTTTTTTTCCACATCGACGTCGCTAATGTCATGTTGTC AAACTTTGAATTTCGGCGACGCAGGGCCCTCATCATGCAAGTTCAATTGGGAATTAGGGCATGGAATGATAGCTG GCATAAAATGATAGCTTAG |