© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5219.t1 |
| Gene name | |
| Location | scaffold_028:262254..265190 |
| Strand | - |
| Gene length (bp) | 2936 |
| Transcript length (bp) | 2784 |
| Coding sequence length (bp) | 2784 |
| Protein length (aa) | 928 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00999 | Na_H_Exchanger | Sodium/hydrogen exchanger family | 1.9E-56 | 39 | 426 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0015299 | solute:proton antiporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0015298 | solute:cation antiporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0015297 | antiporter activity | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0006811 | ion transport | No |
| GO:0005215 | transporter activity | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 29 | 51 | 22 |
| 2 | 58 | 80 | 22 |
| 3 | 95 | 117 | 22 |
| 4 | 124 | 146 | 22 |
| 5 | 161 | 183 | 22 |
| 6 | 196 | 218 | 22 |
| 7 | 228 | 250 | 22 |
| 8 | 271 | 293 | 22 |
| 9 | 318 | 340 | 22 |
| 10 | 345 | 367 | 22 |
| 11 | 378 | 400 | 22 |
| 12 | 413 | 432 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5219.t1 MSSNSTTKVKAQGGILEGSNPAHYDSSNPIVIFIIQAGIIIIFCRLLHWPLSKIRQPRVIAEVIAGVILGPSVMG RIPGFTDAIFPTASIPNLNLVANLGLVLFLFLVGLETNLRFLVSNWRVAVSVSAAGMILPFGLGCAIAYGLYNTF QDEPDTVDINFGTFLLFIGIAMAITAFPVLCRILTELKLLGTNVGVIVLSAGVGNDVVGWILLALCVALVNAGTG LTALWVLLVCVGYILFLTFIFRPLFLRFLRHTGSLQKGPSQSVVAITLLIALASAFFTQIIGIHAIFGGFIIGLL CPHEGGFAIKLTEKIEDLVAALFLPLYFTLSGLQTNLGLLDNGTVWGYVVGIIAIAFTAKVAGGALASRLCGLLW RESFSIGVLMSCKGLVELIVLNIGLQARILSTRTFTMFVVMALVTTFATTPLTVALYPKWYQVKVERWRRGEIDW KTGNPIPSDARTDSIALAKEQHRALPVRKLLVYLRLDGLSSICTLAALLSPNRPPLPKQHPDTLASPDPAAEETA TATTKTEEDEDQEDQDPKPTLQVHGVRLLELTDRDSSVMTVSELDQLHYPVWDPVVNTFRAFGQWHDLSIVAGVS VVPEHSYADTVVSMARDDSTDLLLLPWSETGSMSEHHPLDLNSVLDDPNATRFVASAPYTAFAESVLRNVRCNVG LLVERTPTRRNNGRGLRGKPSLGGLSIHSGNLNMGIGSSGDRGVAVVPTTRKAHHILLPYFGGKDDRFAIRLVLQ LIRNDQVTATVVHVVGDRTPIATPKAAVAGGLVGGVRNRKKDSSSTSSSGGGGGGGKKREVDDSDAVYLTALKDS LDEDVAARMVFKKLVLAGGIEQSSSGVVERVVEHVKEELGRLGSGQRAGGLVVVGRGSVGVDTIVDDGDEDKDGG GVLGVLGEKLVQMGGGDVLVVQARDTL* |
| Coding | >Ani_SJS100_1|g5219.t1 ATGTCCTCCAATTCCACCACCAAAGTCAAGGCTCAAGGAGGCATCCTCGAAGGCAGCAATCCCGCCCATTATGAC TCGTCTAATCCCATCGTTATTTTCATCATCCAGGCCGGCATAATCATCATCTTCTGCCGCCTGCTACACTGGCCA CTTTCCAAGATCCGCCAGCCGCGCGTGATCGCAGAAGTCATTGCTGGCGTCATACTAGGCCCCTCGGTAATGGGC CGTATTCCCGGCTTCACCGATGCCATATTTCCAACCGCCTCTATTCCCAATCTGAATTTGGTCGCGAATCTGGGG CTGGTGCTTTTTCTGTTCCTCGTGGGGCTGGAAACCAACCTGCGTTTCCTGGTCAGTAACTGGCGCGTCGCCGTT AGCGTGTCGGCTGCTGGCATGATTTTGCCCTTTGGTTTGGGCTGCGCCATTGCATATGGACTGTATAACACCTTC CAGGATGAACCGGACACGGTGGATATTAACTTTGGCACCTTTTTGCTCTTTATCGGTATTGCTATGGCTATCACT GCGTTCCCCGTTCTGTGCCGTATCTTAACGGAGCTCAAATTACTGGGAACTAATGTCGGTGTAATCGTGCTCTCA GCCGGCGTTGGAAACGATGTCGTCGGTTGGATTCTACTCGCTCTGTGCGTCGCCCTCGTCAACGCCGGCACTGGC CTCACTGCACTCTGGGTCTTGCTCGTCTGTGTTGGGTACATCCTGTTCCTCACCTTCATCTTCCGACCACTTTTC CTGCGCTTCCTCCGCCACACGGGCAGCCTGCAGAAAGGACCCAGTCAGTCTGTAGTCGCCATCACGCTACTCATC GCACTGGCCTCGGCCTTCTTCACCCAGATCATCGGCATCCACGCCATTTTCGGCGGCTTCATCATCGGCTTACTA TGTCCGCACGAGGGCGGCTTCGCCATCAAACTAACCGAGAAGATCGAAGATCTTGTCGCTGCGCTCTTTCTTCCG CTCTACTTCACCCTCTCCGGCCTCCAAACCAACCTGGGTCTGCTTGACAACGGCACCGTCTGGGGCTACGTGGTC GGCATCATTGCCATCGCCTTCACGGCCAAAGTAGCTGGCGGTGCTCTCGCCTCGCGACTTTGCGGCCTTCTCTGG CGCGAGAGTTTTTCCATCGGTGTGCTAATGAGCTGCAAGGGTCTCGTCGAGCTGATCGTCTTGAACATCGGCCTC CAAGCCCGCATCCTCAGCACTCGCACCTTCACTATGTTCGTCGTCATGGCCCTAGTAACCACCTTCGCCACCACT CCCCTCACCGTTGCCCTCTACCCCAAATGGTACCAAGTCAAAGTCGAGCGCTGGCGCCGCGGCGAAATTGACTGG AAGACCGGCAACCCCATCCCCTCCGACGCCCGCACCGACAGCATCGCATTGGCCAAAGAACAGCACCGCGCTCTT CCCGTCCGCAAACTTCTCGTCTACCTGCGCCTCGACGGCCTCTCCAGCATCTGCACTCTTGCTGCCCTCCTTTCC CCAAACCGTCCCCCTCTCCCAAAGCAACACCCGGACACCCTCGCCTCCCCTGACCCGGCTGCCGAAGAAACAGCC ACAGCAACCACCAAGACAGAAGAAGACGAAGACCAAGAAGACCAAGACCCCAAACCCACCCTTCAAGTCCACGGT GTCCGCCTCCTCGAACTCACAGACCGCGACTCCAGCGTCATGACCGTCTCCGAACTCGACCAACTCCACTACCCC GTCTGGGATCCCGTCGTGAACACCTTCCGCGCCTTCGGCCAATGGCACGATCTTTCCATCGTAGCCGGCGTCTCC GTCGTACCCGAACACTCCTACGCCGATACAGTAGTCAGCATGGCTCGCGACGACTCGACTGATCTGCTCCTCCTT CCCTGGAGTGAAACCGGTTCCATGTCTGAACACCACCCCTTGGATTTGAATTCCGTTCTGGATGATCCCAATGCC ACCCGCTTCGTGGCGTCCGCGCCGTATACGGCTTTCGCGGAGAGTGTGTTGCGCAATGTGCGGTGTAATGTGGGG TTGTTGGTTGAGAGAACGCCAACGAGGAGAAATAATGGGCGGGGGCTGCGCGGTAAGCCCTCGCTTGGGGGGTTG AGTATACATAGTGGGAATTTGAATATGGGTATTGGCAGTAGTGGGGATAGGGGTGTTGCGGTGGTGCCGACGACG AGGAAAGCGCATCATATTCTGTTGCCGTATTTCGGGGGGAAGGATGATCGCTTCGCGATTAGGTTGGTACTGCAG TTGATTAGGAATGATCAGGTTACGGCGACGGTTGTGCATGTTGTTGGCGATCGGACGCCGATTGCTACGCCGAAG GCTGCTGTTGCTGGGGGTCTTGTGGGAGGGGTGAGGAATAGGAAGAAGGATAGTAGTAGTACGAGTAGCAGCGGT GGTGGTGGTGGTGGTGGTAAGAAGCGTGAGGTTGATGACTCGGATGCGGTGTATCTTACTGCGTTGAAGGATTCG TTGGATGAGGATGTGGCGGCGCGGATGGTATTCAAGAAATTGGTTCTTGCGGGTGGGATCGAGCAGAGCAGTAGT GGGGTGGTGGAGAGGGTGGTTGAGCATGTCAAGGAGGAACTGGGGAGATTAGGGTCTGGGCAACGGGCTGGTGGG TTGGTTGTTGTGGGGAGGGGGAGTGTGGGGGTGGATACGATAGTGGATGATGGGGATGAAGATAAGGATGGCGGA GGGGTATTGGGGGTGCTGGGGGAGAAGTTGGTGCAGATGGGTGGTGGGGATGTGTTGGTTGTGCAGGCGAGGGAT ACTCTATGA |
| Transcript | >Ani_SJS100_1|g5219.t1 ATGTCCTCCAATTCCACCACCAAAGTCAAGGCTCAAGGAGGCATCCTCGAAGGCAGCAATCCCGCCCATTATGAC TCGTCTAATCCCATCGTTATTTTCATCATCCAGGCCGGCATAATCATCATCTTCTGCCGCCTGCTACACTGGCCA CTTTCCAAGATCCGCCAGCCGCGCGTGATCGCAGAAGTCATTGCTGGCGTCATACTAGGCCCCTCGGTAATGGGC CGTATTCCCGGCTTCACCGATGCCATATTTCCAACCGCCTCTATTCCCAATCTGAATTTGGTCGCGAATCTGGGG CTGGTGCTTTTTCTGTTCCTCGTGGGGCTGGAAACCAACCTGCGTTTCCTGGTCAGTAACTGGCGCGTCGCCGTT AGCGTGTCGGCTGCTGGCATGATTTTGCCCTTTGGTTTGGGCTGCGCCATTGCATATGGACTGTATAACACCTTC CAGGATGAACCGGACACGGTGGATATTAACTTTGGCACCTTTTTGCTCTTTATCGGTATTGCTATGGCTATCACT GCGTTCCCCGTTCTGTGCCGTATCTTAACGGAGCTCAAATTACTGGGAACTAATGTCGGTGTAATCGTGCTCTCA GCCGGCGTTGGAAACGATGTCGTCGGTTGGATTCTACTCGCTCTGTGCGTCGCCCTCGTCAACGCCGGCACTGGC CTCACTGCACTCTGGGTCTTGCTCGTCTGTGTTGGGTACATCCTGTTCCTCACCTTCATCTTCCGACCACTTTTC CTGCGCTTCCTCCGCCACACGGGCAGCCTGCAGAAAGGACCCAGTCAGTCTGTAGTCGCCATCACGCTACTCATC GCACTGGCCTCGGCCTTCTTCACCCAGATCATCGGCATCCACGCCATTTTCGGCGGCTTCATCATCGGCTTACTA TGTCCGCACGAGGGCGGCTTCGCCATCAAACTAACCGAGAAGATCGAAGATCTTGTCGCTGCGCTCTTTCTTCCG CTCTACTTCACCCTCTCCGGCCTCCAAACCAACCTGGGTCTGCTTGACAACGGCACCGTCTGGGGCTACGTGGTC GGCATCATTGCCATCGCCTTCACGGCCAAAGTAGCTGGCGGTGCTCTCGCCTCGCGACTTTGCGGCCTTCTCTGG CGCGAGAGTTTTTCCATCGGTGTGCTAATGAGCTGCAAGGGTCTCGTCGAGCTGATCGTCTTGAACATCGGCCTC CAAGCCCGCATCCTCAGCACTCGCACCTTCACTATGTTCGTCGTCATGGCCCTAGTAACCACCTTCGCCACCACT CCCCTCACCGTTGCCCTCTACCCCAAATGGTACCAAGTCAAAGTCGAGCGCTGGCGCCGCGGCGAAATTGACTGG AAGACCGGCAACCCCATCCCCTCCGACGCCCGCACCGACAGCATCGCATTGGCCAAAGAACAGCACCGCGCTCTT CCCGTCCGCAAACTTCTCGTCTACCTGCGCCTCGACGGCCTCTCCAGCATCTGCACTCTTGCTGCCCTCCTTTCC CCAAACCGTCCCCCTCTCCCAAAGCAACACCCGGACACCCTCGCCTCCCCTGACCCGGCTGCCGAAGAAACAGCC ACAGCAACCACCAAGACAGAAGAAGACGAAGACCAAGAAGACCAAGACCCCAAACCCACCCTTCAAGTCCACGGT GTCCGCCTCCTCGAACTCACAGACCGCGACTCCAGCGTCATGACCGTCTCCGAACTCGACCAACTCCACTACCCC GTCTGGGATCCCGTCGTGAACACCTTCCGCGCCTTCGGCCAATGGCACGATCTTTCCATCGTAGCCGGCGTCTCC GTCGTACCCGAACACTCCTACGCCGATACAGTAGTCAGCATGGCTCGCGACGACTCGACTGATCTGCTCCTCCTT CCCTGGAGTGAAACCGGTTCCATGTCTGAACACCACCCCTTGGATTTGAATTCCGTTCTGGATGATCCCAATGCC ACCCGCTTCGTGGCGTCCGCGCCGTATACGGCTTTCGCGGAGAGTGTGTTGCGCAATGTGCGGTGTAATGTGGGG TTGTTGGTTGAGAGAACGCCAACGAGGAGAAATAATGGGCGGGGGCTGCGCGGTAAGCCCTCGCTTGGGGGGTTG AGTATACATAGTGGGAATTTGAATATGGGTATTGGCAGTAGTGGGGATAGGGGTGTTGCGGTGGTGCCGACGACG AGGAAAGCGCATCATATTCTGTTGCCGTATTTCGGGGGGAAGGATGATCGCTTCGCGATTAGGTTGGTACTGCAG TTGATTAGGAATGATCAGGTTACGGCGACGGTTGTGCATGTTGTTGGCGATCGGACGCCGATTGCTACGCCGAAG GCTGCTGTTGCTGGGGGTCTTGTGGGAGGGGTGAGGAATAGGAAGAAGGATAGTAGTAGTACGAGTAGCAGCGGT GGTGGTGGTGGTGGTGGTAAGAAGCGTGAGGTTGATGACTCGGATGCGGTGTATCTTACTGCGTTGAAGGATTCG TTGGATGAGGATGTGGCGGCGCGGATGGTATTCAAGAAATTGGTTCTTGCGGGTGGGATCGAGCAGAGCAGTAGT GGGGTGGTGGAGAGGGTGGTTGAGCATGTCAAGGAGGAACTGGGGAGATTAGGGTCTGGGCAACGGGCTGGTGGG TTGGTTGTTGTGGGGAGGGGGAGTGTGGGGGTGGATACGATAGTGGATGATGGGGATGAAGATAAGGATGGCGGA GGGGTATTGGGGGTGCTGGGGGAGAAGTTGGTGCAGATGGGTGGTGGGGATGTGTTGGTTGTGCAGGCGAGGGAT ACTCTATGA |
| Gene | >Ani_SJS100_1|g5219.t1 ATGTCCTCCAATTCCACCACCAAAGTCAAGGCTCAAGGAGGCATCCTCGAAGGCAGCAATCCCGCCCATTATGAC TCGTCTAATCCCATCGTTATTTTCATCATCCAGGTGGGTGTTCCCTGCTAAATCTTCCAAATGCTACTCTGCTAA CGTCGATCAGGCCGGCATAATCATCATCTTCTGCCGCCTGCTACACTGGCCACTTTCCAAGATCCGCCAGCCGCG CGTGATCGCAGAAGTCATTGCTGGCGTCATACTAGGCCCCTCGGTAATGGGCCGTATTCCCGGCTTCACCGATGC CATATTTCCAACCGCCTCTATTCCCAATCTGAATTTGGTCGCGAATCTGGGGCTGGTGCTTTTTCTGTTCCTCGT GGGGCTGGAAACCAACCTGCGTTTCCTGGTCAGTAACTGGCGCGTCGCCGTTAGCGTGTCGGCTGCTGGCATGAT TTTGCCCTTTGGTTTGGGCTGCGCCATTGCATATGGACTGTATAACACCTTCCAGGATGAACCGGACACGGTGGA TATTAACTTTGGCACCTTTTTGCTCTTTATCGGTATTGCTATGGCTATCACTGTAAGTCGTTTTTGAGTCACAAA CCGTCTTATTTTGCTAACCGCTGGGAAGGCGTTCCCCGTTCTGTGCCGTATCTTAACGGAGCTCAAATTACTGGG AACTAATGTCGGTGTAATCGTGCTCTCAGCCGGCGTTGGAAACGATGTCGTCGGTTGGATTCTACTCGCTCTGTG CGTCGCCCTCGTCAACGCCGGCACTGGCCTCACTGCACTCTGGGTCTTGCTCGTCTGTGTTGGGTACATCCTGTT CCTCACCTTCATCTTCCGACCACTTTTCCTGCGCTTCCTCCGCCACACGGGCAGCCTGCAGAAAGGACCCAGTCA GTCTGTAGTCGCCATCACGCTACTCATCGCACTGGCCTCGGCCTTCTTCACCCAGATCATCGGCATCCACGCCAT TTTCGGCGGCTTCATCATCGGCTTACTATGTCCGCACGAGGGCGGCTTCGCCATCAAACTAACCGAGAAGATCGA AGATCTTGTCGCTGCGCTCTTTCTTCCGCTCTACTTCACCCTCTCCGGCCTCCAAACCAACCTGGGTCTGCTTGA CAACGGCACCGTCTGGGGCTACGTGGTCGGCATCATTGCCATCGCCTTCACGGCCAAAGTAGCTGGCGGTGCTCT CGCCTCGCGACTTTGCGGCCTTCTCTGGCGCGAGAGTTTTTCCATCGGTGTGCTAATGAGCTGCAAGGGTCTCGT CGAGCTGATCGTCTTGGTATGCCCCTTCCCTTCCCACTATCACACTCCCCAACTAATCAACCCAGAACATCGGCC TCCAAGCCCGCATCCTCAGCACTCGCACCTTCACTATGTTCGTCGTCATGGCCCTAGTAACCACCTTCGCCACCA CTCCCCTCACCGTTGCCCTCTACCCCAAATGGTACCAAGTCAAAGTCGAGCGCTGGCGCCGCGGCGAAATTGACT GGAAGACCGGCAACCCCATCCCCTCCGACGCCCGCACCGACAGCATCGCATTGGCCAAAGAACAGCACCGCGCTC TTCCCGTCCGCAAACTTCTCGTCTACCTGCGCCTCGACGGCCTCTCCAGCATCTGCACTCTTGCTGCCCTCCTTT CCCCAAACCGTCCCCCTCTCCCAAAGCAACACCCGGACACCCTCGCCTCCCCTGACCCGGCTGCCGAAGAAACAG CCACAGCAACCACCAAGACAGAAGAAGACGAAGACCAAGAAGACCAAGACCCCAAACCCACCCTTCAAGTCCACG GTGTCCGCCTCCTCGAACTCACAGACCGCGACTCCAGCGTCATGACCGTCTCCGAACTCGACCAACTCCACTACC CCGTCTGGGATCCCGTCGTGAACACCTTCCGCGCCTTCGGCCAATGGCACGATCTTTCCATCGTAGCCGGCGTCT CCGTCGTACCCGAACACTCCTACGCCGATACAGTAGTCAGCATGGCTCGCGACGACTCGACTGATCTGCTCCTCC TTCCCTGGAGTGAAACCGGTTCCATGTCTGAACACCACCCCTTGGATTTGAATTCCGTTCTGGATGATCCCAATG CCACCCGCTTCGTGGCGTCCGCGCCGTATACGGCTTTCGCGGAGAGTGTGTTGCGCAATGTGCGGTGTAATGTGG GGTTGTTGGTTGAGAGAACGCCAACGAGGAGAAATAATGGGCGGGGGCTGCGCGGTAAGCCCTCGCTTGGGGGGT TGAGTATACATAGTGGGAATTTGAATATGGGTATTGGCAGTAGTGGGGATAGGGGTGTTGCGGTGGTGCCGACGA CGAGGAAAGCGCATCATATTCTGTTGCCGTATTTCGGGGGGAAGGATGATCGCTTCGCGATTAGGTTGGTACTGC AGTTGATTAGGAATGATCAGGTTACGGCGACGGTTGTGCATGTTGTTGGCGATCGGACGCCGATTGCTACGCCGA AGGCTGCTGTTGCTGGGGGTCTTGTGGGAGGGGTGAGGAATAGGAAGAAGGATAGTAGTAGTACGAGTAGCAGCG GTGGTGGTGGTGGTGGTGGTAAGAAGCGTGAGGTTGATGACTCGGATGCGGTGTATCTTACTGCGTTGAAGGATT CGTTGGATGAGGATGTGGCGGCGCGGATGGTATTCAAGAAATTGGTTCTTGCGGGTGGGATCGAGCAGAGCAGTA GTGGGGTGGTGGAGAGGGTGGTTGAGCATGTCAAGGAGGAACTGGGGAGATTAGGGTCTGGGCAACGGGCTGGTG GGTTGGTTGTTGTGGGGAGGGGGAGTGTGGGGGTGGATACGATAGTGGATGATGGGGATGAAGATAAGGATGGCG GAGGGGTATTGGGGGTGCTGGGGGAGAAGTTGGTGCAGATGGGTGGTGGGGATGTGTTGGTTGTGCAGGCGAGGG ATACTCTATGA |