© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5214.t1 |
| Gene name | |
| Location | scaffold_028:245495..246752 |
| Strand | + |
| Gene length (bp) | 1257 |
| Transcript length (bp) | 1062 |
| Coding sequence length (bp) | 1062 |
| Protein length (aa) | 354 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 32 | 17 |
| 2 | 45 | 67 | 22 |
| 3 | 98 | 120 | 22 |
| 4 | 132 | 154 | 22 |
| 5 | 179 | 201 | 22 |
| 6 | 214 | 236 | 22 |
| 7 | 251 | 273 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5214.t1 MKHIGKTGRDNLGAAIAMLALAVVSVALRLVVRIMTRQWSPLSDGLLLLTLACMTVFAALLIQYIVAGPGPGTFD LNEFAADADIGGMVWAKAFLKTLYVADLFFMATITFVKLSVLAFLHGLFKVSKIYRVLNYVTAALCVAWFLIVLF VNIFQCHPIHMLWDAMGAAEYCIASGRLWLGMELTNLFLDVIILFLPVYVVTRLQLSRTRKVQITGIFLLGGLVC IASICKLSYLWIPATPQVVRAPETMVWSSVQLGVATLCACLPTYAPLFRVARGKMSTVKTPTAPYPYGSDNTPRN APAGKSAPYRRVEDPLLSTQQTEITRGDGESYKMDQLGPCHIYVKQSVDVDVV* |
| Coding | >Ani_SJS100_1|g5214.t1 ATGAAGCACATCGGCAAAACCGGCCGGGACAACCTGGGCGCCGCCATCGCAATGCTGGCGCTGGCGGTGGTCTCG GTCGCTCTCCGGTTGGTGGTGAGAATCATGACCCGACAGTGGTCTCCCTTGTCCGACGGCCTGCTTCTGCTCACG CTGGCATGCATGACGGTGTTTGCGGCTCTGTTAATTCAATATATTGTCGCAGGACCTGGCCCGGGCACCTTCGAC CTGAACGAATTCGCAGCCGATGCAGACATTGGGGGAATGGTATGGGCCAAGGCATTTCTCAAGACTCTGTACGTC GCCGACCTTTTCTTCATGGCGACCATCACTTTTGTCAAACTATCGGTACTCGCGTTTCTGCACGGCCTCTTTAAG GTTTCCAAAATATACCGCGTCTTGAACTACGTGACAGCCGCCCTCTGCGTTGCTTGGTTCCTCATTGTTCTGTTC GTCAACATTTTCCAGTGTCACCCAATCCACATGTTGTGGGATGCGATGGGCGCTGCGGAATACTGCATCGCCAGT GGTCGGCTCTGGTTGGGGATGGAGCTCACGAACCTGTTCCTTGATGTTATAATCTTGTTTCTACCTGTGTATGTG GTGACGAGACTGCAGCTCAGTCGCACACGCAAGGTCCAGATTACTGGTATATTCCTTCTGGGTGGATTGGTCTGT ATTGCCAGTATCTGCAAGCTCTCCTATCTCTGGATCCCGGCCACCCCCCAAGTTGTGCGGGCTCCCGAGACAATG GTCTGGTCATCGGTACAGCTGGGGGTGGCCACGCTCTGCGCATGTTTGCCAACCTACGCCCCACTGTTCCGAGTG GCACGGGGAAAGATGTCTACGGTGAAGACGCCCACTGCACCGTATCCGTACGGCAGCGACAACACGCCGCGCAAT GCTCCGGCAGGTAAGAGCGCACCCTATCGACGGGTGGAAGATCCGCTGCTGAGCACCCAGCAGACGGAAATCACG CGCGGGGATGGCGAGTCGTACAAGATGGACCAGCTCGGCCCCTGCCACATCTACGTGAAGCAGAGTGTAGACGTT GACGTGGTCTAG |
| Transcript | >Ani_SJS100_1|g5214.t1 ATGAAGCACATCGGCAAAACCGGCCGGGACAACCTGGGCGCCGCCATCGCAATGCTGGCGCTGGCGGTGGTCTCG GTCGCTCTCCGGTTGGTGGTGAGAATCATGACCCGACAGTGGTCTCCCTTGTCCGACGGCCTGCTTCTGCTCACG CTGGCATGCATGACGGTGTTTGCGGCTCTGTTAATTCAATATATTGTCGCAGGACCTGGCCCGGGCACCTTCGAC CTGAACGAATTCGCAGCCGATGCAGACATTGGGGGAATGGTATGGGCCAAGGCATTTCTCAAGACTCTGTACGTC GCCGACCTTTTCTTCATGGCGACCATCACTTTTGTCAAACTATCGGTACTCGCGTTTCTGCACGGCCTCTTTAAG GTTTCCAAAATATACCGCGTCTTGAACTACGTGACAGCCGCCCTCTGCGTTGCTTGGTTCCTCATTGTTCTGTTC GTCAACATTTTCCAGTGTCACCCAATCCACATGTTGTGGGATGCGATGGGCGCTGCGGAATACTGCATCGCCAGT GGTCGGCTCTGGTTGGGGATGGAGCTCACGAACCTGTTCCTTGATGTTATAATCTTGTTTCTACCTGTGTATGTG GTGACGAGACTGCAGCTCAGTCGCACACGCAAGGTCCAGATTACTGGTATATTCCTTCTGGGTGGATTGGTCTGT ATTGCCAGTATCTGCAAGCTCTCCTATCTCTGGATCCCGGCCACCCCCCAAGTTGTGCGGGCTCCCGAGACAATG GTCTGGTCATCGGTACAGCTGGGGGTGGCCACGCTCTGCGCATGTTTGCCAACCTACGCCCCACTGTTCCGAGTG GCACGGGGAAAGATGTCTACGGTGAAGACGCCCACTGCACCGTATCCGTACGGCAGCGACAACACGCCGCGCAAT GCTCCGGCAGGTAAGAGCGCACCCTATCGACGGGTGGAAGATCCGCTGCTGAGCACCCAGCAGACGGAAATCACG CGCGGGGATGGCGAGTCGTACAAGATGGACCAGCTCGGCCCCTGCCACATCTACGTGAAGCAGAGTGTAGACGTT GACGTGGTCTAG |
| Gene | >Ani_SJS100_1|g5214.t1 ATGAAGCACATCGGCAAAACCGGCCGGGACAACCTGGGCGCCGCCATCGCAATGCTGGCGCTGGCGGTGGTCTCG GTCGCTCTCCGGTTGGTGGTGAGAATCATGACCCGACAGTGGTCTCCCTTGTCCGACGGCCTGCTTCTGCTCACG CTGGCATGCATGACGGTGTTTGCGGCTCTGTTAATTCAATGTATGTCGACGTCTTAAATAATTCAACACGAGGAG GGAGCAGTTACTGATCCTGCGGTTACCCAGATATTGTCGCAGGACCTGGCCCGGGCACCTTCGACCTGAACGAAT TCGCAGCCGATGCAGACATTGGGGGAATGGTATGGGCCAAGGCATTTCTCAAGGTCTGTTGCGCGATGCCATCCG TATGCGTGCGCAAGACTGACTGACTTTATTGAGTCAGACTCTGTACGTCGCCGACCTTTTCTTCATGGCGACCAT CACTTTTGTCAAACTATCGGTACTCGCGTTTCTGCACGGCCTCTTTAAGGTTTCCAAAATATACCGCGTCTTGAA CTACGTGACAGCCGCCCTCTGCGTTGCTTGGTTCCTCATTGTTCTGTTCGTCAACATTTTCCAGTGTCACCCAAT CCACATGTTGTGGGATGCGATGGGCGCTGCGGAATACTGCATCGCCAGTGGTCGGCTCTGGTTGGGGATGGAGCT CACGAACCTGTTCCTTGATGTTATAATCTTGTTTCTACCTGTGTATGTGGTGACGAGACTGCAGCTCAGTCGCAC ACGCAAGGTCCAGATTACTGGTATATTCCTTCTGGGTGGATTGTAGGTTTTGTCTCGGGACTCTGGTCTCCTCTC AAACACTCTTGGAATCCATTGCTGATCGCATGAAACAGGGTCTGTATTGCCAGTATCTGCAAGCTCTCCTATCTC TGGATCCCGGCCACCCCCCAAGTTGTGCGGGCTCCCGAGACAATGGTCTGGTCATCGGTACAGCTGGGGGTGGCC ACGCTCTGCGCATGTTTGCCAACCTACGCCCCACTGTTCCGAGTGGCACGGGGAAAGATGTCTACGGTGAAGACG CCCACTGCACCGTATCCGTACGGCAGCGACAACACGCCGCGCAATGCTCCGGCAGGTAAGAGCGCACCCTATCGA CGGGTGGAAGATCCGCTGCTGAGCACCCAGCAGACGGAAATCACGCGCGGGGATGGCGAGTCGTACAAGATGGAC CAGCTCGGCCCCTGCCACATCTACGTGAAGCAGAGTGTAGACGTTGACGTGGTCTAG |