Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5212.t1
Gene name
Locationscaffold_028:234040..235093
Strand-
Gene length (bp)1053
Transcript length (bp)900
Coding sequence length (bp)900
Protein length (aa) 300

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 6.0E-41 9 197
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 4.0E-29 12 200
PF08659 KR KR domain 2.6E-11 7 166

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5212.t1
MTNEKQTWFITGCSSGFGEQFVRQLRERGDNVVATGRNAESKLAHLKDTGATILELDVTAPQEELNAKFQQAIDI
YGGVDVLVNNAGYIQCGAIEELTPEDMKRSLDTNFHGPINLTRAALPHFRSKGEKGQGMIIYMGSQSGFWGEPAA
SAYCASKFALEGAVESLSKELGWLAPGIKPLIIEAGIFSTEVMRNINHVPYRVDFYRGLNDACRVRGEGNYRNPP
GNAVDLIAKIIQIAKGEGIAEGKEIPLRVPFGSDSLGFLKEKARDMMRIAEEWEEIARSTDFPDHKGPMPDIPA*
Coding >Ani_SJS100_1|g5212.t1
ATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCAGTGGCTTCGGGGAGCAGTTTGTACGCCAACTT
CGCGAACGGGGTGACAACGTCGTCGCCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGCGAAGTTTCAGCAGGCCATCGATATC
TATGGGGGAGTCGATGTACTCGTGAACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCACACCGGAG
GATATGAAACGATCCCTCGACACTAACTTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGCATTTTCGC
AGCAAGGGTGAGAAGGGTCAAGGTATGATCATTTACATGGGATCGCAGTCTGGTTTTTGGGGAGAGCCAGCTGCA
TCCGCGTACTGTGCCAGTAAATTTGCTTTAGAAGGAGCCGTTGAAAGTCTCTCTAAAGAGCTAGGCTGGCTTGCA
CCAGGCATCAAACCCCTCATTATAGAAGCAGGCATCTTCAGCACTGAGGTCATGAGGAATATCAATCATGTTCCT
TACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCGCGGAGAAGGCAACTACCGCAACCCACCG
GGCAATGCCGTGGATTTGATTGCCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAGATC
CCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGAGAAGGCGCGGGATATGATGCGCATTGCA
GAGGAATGGGAAGAGATTGCCCGCAGCACTGATTTCCCAGATCACAAGGGACCTATGCCAGATATACCGGCTTGA
Transcript >Ani_SJS100_1|g5212.t1
ATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCAGTGGCTTCGGGGAGCAGTTTGTACGCCAACTT
CGCGAACGGGGTGACAACGTCGTCGCCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGCGAAGTTTCAGCAGGCCATCGATATC
TATGGGGGAGTCGATGTACTCGTGAACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCACACCGGAG
GATATGAAACGATCCCTCGACACTAACTTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGCATTTTCGC
AGCAAGGGTGAGAAGGGTCAAGGTATGATCATTTACATGGGATCGCAGTCTGGTTTTTGGGGAGAGCCAGCTGCA
TCCGCGTACTGTGCCAGTAAATTTGCTTTAGAAGGAGCCGTTGAAAGTCTCTCTAAAGAGCTAGGCTGGCTTGCA
CCAGGCATCAAACCCCTCATTATAGAAGCAGGCATCTTCAGCACTGAGGTCATGAGGAATATCAATCATGTTCCT
TACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCGCGGAGAAGGCAACTACCGCAACCCACCG
GGCAATGCCGTGGATTTGATTGCCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAGATC
CCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGAGAAGGCGCGGGATATGATGCGCATTGCA
GAGGAATGGGAAGAGATTGCCCGCAGCACTGATTTCCCAGATCACAAGGGACCTATGCCAGATATACCGGCTTGA
Gene >Ani_SJS100_1|g5212.t1
ATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCAGTGGCTTCGGGGAGCAGTTTGTACGCCAACTT
CGCGAACGGGGTGACAACGTCGTCGCCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGCGAAGTTTCAGCAGGCCATCGATATC
TATGGGGGAGTCGATGTACTCGTGAACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCACGTGAGTT
TTGGCCTGAGGACTTCTAGTCTTTTTGTTTGATAACCTCATTTGGGAAGGATATGTTTGACTGACTGAGACGTTA
GACCGGAGGATATGAAACGATCCCTCGACACTAACTTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGC
ATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGTATGATCATTTACATGGGATCGCAGTCTGGTTTTTGGGGAGAGC
CAGCTGCATCCGCGTACTGTGCCAGTAAATTTGCTTTAGAAGGTATGCTTTACCAGTCTGTCCATCTGCTCCTAC
ACGACAAAGCTGACAGTAAAACTATTTCCCACCACAGGAGCCGTTGAAAGTCTCTCTAAAGAGCTAGGCTGGCTT
GCACCAGGCATCAAACCCCTCATTATAGAAGCAGGCATCTTCAGCACTGAGGTCATGAGGAATATCAATCATGTT
CCTTACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCGCGGAGAAGGCAACTACCGCAACCCA
CCGGGCAATGCCGTGGATTTGATTGCCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAG
ATCCCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGAGAAGGCGCGGGATATGATGCGCATT
GCAGAGGAATGGGAAGAGATTGCCCGCAGCACTGATTTCCCAGATCACAAGGGACCTATGCCAGATATACCGGCT
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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