Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g518.t1
Gene name
Locationscaffold_002:206262..207247
Strand+
Gene length (bp)985
Transcript length (bp)891
Coding sequence length (bp)891
Protein length (aa) 297

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06148 COG2 COG (conserved oligomeric Golgi) complex component, COG2 5.5E-37 29 159
PF08700 Vps51 Vps51/Vps67 4.1E-05 35 110

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g518.t1
MNRFRFGDSDESASEFDDDTSGLPFPEPLSRASFLAPDFDPAAYLSSLTNRHQSLEDLRQELRDLDQLLSRELLD
LVNENYQDFLSLGSALNGGEEKVEQVRVGLLAFQRDVQSIRDKVEARQQEMVELLKEKKRLKTQANVGQALLDYA
DRVEELEKRLMIGDTPRPPQDGTPGESDSDSDLMESDSDDSDEDELPNGATTASLVSLKTLERHIQKYVYLTKLS
SRIGDNHPFLQSQQPRMSKIRSAVLLDLKTALEQASHAGDKRDTKTLAVLRLYKLMGEDTTAVSALKNLKS*
Coding >Ani_SJS100_1|g518.t1
ATGAATAGGTTTCGCTTTGGCGACTCCGATGAGTCTGCGTCTGAATTCGACGATGATACCTCCGGACTGCCTTTC
CCCGAGCCTCTGTCTCGTGCTTCCTTCCTCGCCCCCGACTTCGACCCCGCGGCGTATCTATCCTCCCTCACCAAT
CGACACCAGAGCCTCGAGGACTTGCGACAGGAACTACGGGATTTGGACCAATTACTCAGTCGAGAGCTTTTAGAC
TTGGTCAACGAAAACTACCAGGACTTTTTATCCCTAGGGAGCGCATTAAACGGAGGAGAGGAGAAAGTCGAGCAG
GTACGGGTCGGTCTTTTAGCATTCCAGCGTGATGTCCAGTCAATACGCGATAAGGTTGAGGCCAGACAACAGGAG
ATGGTAGAGCTCCTGAAAGAGAAGAAACGCCTGAAGACACAAGCCAATGTTGGACAGGCCCTGCTGGACTATGCG
GATCGAGTCGAGGAGCTGGAGAAGAGATTAATGATCGGAGACACTCCACGGCCACCTCAGGACGGCACCCCGGGC
GAGTCCGATTCGGATTCCGATCTGATGGAGAGCGACAGCGACGATAGTGATGAGGATGAGCTGCCAAACGGCGCA
ACTACTGCGTCACTCGTTTCCCTCAAAACACTCGAGCGTCATATTCAAAAATATGTATACTTGACAAAGCTATCG
TCTCGGATAGGTGACAACCATCCGTTTCTACAGAGCCAACAACCAAGGATGTCGAAAATACGATCTGCGGTGCTC
TTGGATCTGAAGACGGCCCTGGAGCAAGCAAGCCATGCAGGCGACAAGAGGGATACGAAAACGCTGGCCGTATTG
CGTCTCTACAAGCTCATGGGAGAGGACACTACTGCTGTATCGGCACTCAAGAATCTGAAGTCCTAG
Transcript >Ani_SJS100_1|g518.t1
ATGAATAGGTTTCGCTTTGGCGACTCCGATGAGTCTGCGTCTGAATTCGACGATGATACCTCCGGACTGCCTTTC
CCCGAGCCTCTGTCTCGTGCTTCCTTCCTCGCCCCCGACTTCGACCCCGCGGCGTATCTATCCTCCCTCACCAAT
CGACACCAGAGCCTCGAGGACTTGCGACAGGAACTACGGGATTTGGACCAATTACTCAGTCGAGAGCTTTTAGAC
TTGGTCAACGAAAACTACCAGGACTTTTTATCCCTAGGGAGCGCATTAAACGGAGGAGAGGAGAAAGTCGAGCAG
GTACGGGTCGGTCTTTTAGCATTCCAGCGTGATGTCCAGTCAATACGCGATAAGGTTGAGGCCAGACAACAGGAG
ATGGTAGAGCTCCTGAAAGAGAAGAAACGCCTGAAGACACAAGCCAATGTTGGACAGGCCCTGCTGGACTATGCG
GATCGAGTCGAGGAGCTGGAGAAGAGATTAATGATCGGAGACACTCCACGGCCACCTCAGGACGGCACCCCGGGC
GAGTCCGATTCGGATTCCGATCTGATGGAGAGCGACAGCGACGATAGTGATGAGGATGAGCTGCCAAACGGCGCA
ACTACTGCGTCACTCGTTTCCCTCAAAACACTCGAGCGTCATATTCAAAAATATGTATACTTGACAAAGCTATCG
TCTCGGATAGGTGACAACCATCCGTTTCTACAGAGCCAACAACCAAGGATGTCGAAAATACGATCTGCGGTGCTC
TTGGATCTGAAGACGGCCCTGGAGCAAGCAAGCCATGCAGGCGACAAGAGGGATACGAAAACGCTGGCCGTATTG
CGTCTCTACAAGCTCATGGGAGAGGACACTACTGCTGTATCGGCACTCAAGAATCTGAAGTCCTAG
Gene >Ani_SJS100_1|g518.t1
ATGAATAGGTTTCGCGTATGCTATTCCCTGTCTAACCGAACTCTTCCTCCTTCACCCATCCATTGATTCTCCCGC
CATAGTTCAGTGGAACTGATTGCCATGCGCCTAGTTTGGCGACTCCGATGAGTCTGCGTCTGAATTCGACGATGA
TACCTCCGGACTGCCTTTCCCCGAGCCTCTGTCTCGTGCTTCCTTCCTCGCCCCCGACTTCGACCCCGCGGCGTA
TCTATCCTCCCTCACCAATCGACACCAGAGCCTCGAGGACTTGCGACAGGAACTACGGGATTTGGACCAATTACT
CAGTCGAGAGCTTTTAGACTTGGTCAACGAAAACTACCAGGACTTTTTATCCCTAGGGAGCGCATTAAACGGAGG
AGAGGAGAAAGTCGAGCAGGTACGGGTCGGTCTTTTAGCATTCCAGCGTGATGTCCAGTCAATACGCGATAAGGT
TGAGGCCAGACAACAGGAGATGGTAGAGCTCCTGAAAGAGAAGAAACGCCTGAAGACACAAGCCAATGTTGGACA
GGCCCTGCTGGACTATGCGGATCGAGTCGAGGAGCTGGAGAAGAGATTAATGATCGGAGACACTCCACGGCCACC
TCAGGACGGCACCCCGGGCGAGTCCGATTCGGATTCCGATCTGATGGAGAGCGACAGCGACGATAGTGATGAGGA
TGAGCTGCCAAACGGCGCAACTACTGCGTCACTCGTTTCCCTCAAAACACTCGAGCGTCATATTCAAAAATATGT
ATACTTGACAAAGCTATCGTCTCGGATAGGTGACAACCATCCGTTTCTACAGAGCCAACAACCAAGGATGTCGAA
AATACGATCTGCGGTGCTCTTGGATCTGAAGACGGCCCTGGAGCAAGCAAGCCATGCAGGCGACAAGAGGGATAC
GAAAACGCTGGCCGTATTGCGTCTCTACAAGCTCATGGGAGAGGACACTACTGCTGTATCGGCACTCAAGAATCT
GAAGTCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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