© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g5176.t1 |
| Gene name | |
| Location | scaffold_028:140038..141813 |
| Strand | + |
| Gene length (bp) | 1775 |
| Transcript length (bp) | 1590 |
| Coding sequence length (bp) | 1590 |
| Protein length (aa) | 530 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.9E-27 | 92 | 472 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.5E-05 | 92 | 343 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 67 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 85 | 107 | 22 |
| 2 | 122 | 144 | 22 |
| 3 | 151 | 173 | 22 |
| 4 | 178 | 200 | 22 |
| 5 | 209 | 231 | 22 |
| 6 | 241 | 260 | 19 |
| 7 | 312 | 334 | 22 |
| 8 | 354 | 376 | 22 |
| 9 | 396 | 418 | 22 |
| 10 | 428 | 450 | 22 |
| 11 | 457 | 479 | 22 |
| 12 | 489 | 511 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5176.t1 MEAYLQYQRIRKSVQQHLAELKDNCSCPSYPIGAHHGPNCKLSGYCSTQEKRPTESMAPDAAILVDWDGQDDPLN PANQSTSRKLFMTFLVSLIAVAVTAASAIDACGVKEYSQYFHVSEVVGSLATGLFLIGFAFGSLLSGPFSETFGR NAIYSTTMLLFLVFVMASGLAPNLHSHLIFRFFAGLFASTPLTCAGGTVADLWNPLEKTYAFPAYAIPAFIGPMI GQIMGSYIPVTLGWRWLEWIMLIMGGVVMALVLLFQPETYGNLVLYWKASILRKETGDERYRAPMEISQKGLGQR LKISVYRPFAMFYSELIIILMSLYLTIIYIVLFTFLEGYAYIFGDIYGLSEGLTNLCWAGMLVGTLLVSGVVPVV YSWTAKAYARDKFTIAPEMRLWYTMLGGAVAVPISLFWMGWTSNPKISIWSPLIASVLFGYGITTIFIVAYMYLI DSYDTYSASALGFLVFTRYVVAGGVTVAGGPIYEALGVQYTLTILGSISAVMALVPYLLYFYGPMIRKKSKYAVN IDTE* |
| Coding | >Ani_SJS100_1|g5176.t1 ATGGAGGCATATCTCCAGTACCAACGGATTCGGAAATCCGTGCAACAGCACTTGGCAGAGCTGAAAGATAATTGC AGCTGTCCGAGCTACCCTATCGGCGCTCATCATGGCCCCAACTGCAAACTGAGCGGCTATTGCAGTACCCAGGAG AAAAGACCTACCGAATCGATGGCCCCTGACGCTGCGATTCTTGTGGACTGGGACGGACAAGATGATCCTTTGAAC CCCGCAAATCAGAGTACATCGCGGAAGCTCTTCATGACCTTCTTGGTCTCATTGATTGCAGTGGCCGTAACTGCT GCATCGGCGATCGATGCTTGTGGAGTCAAGGAGTATAGCCAATACTTCCACGTATCGGAAGTTGTTGGGTCTCTA GCGACAGGTCTGTTCCTTATCGGATTTGCATTTGGTTCCCTTCTCTCGGGCCCTTTCTCAGAAACCTTCGGGCGT AATGCCATATATTCAACAACAATGCTCCTCTTCTTAGTCTTCGTCATGGCATCAGGACTAGCCCCAAACCTCCAC AGTCACCTTATCTTCCGTTTCTTTGCCGGCCTCTTCGCTTCCACTCCGCTAACCTGCGCCGGTGGTACGGTTGCC GACTTATGGAACCCTCTGGAAAAGACCTATGCTTTTCCAGCTTACGCTATACCTGCATTTATCGGGCCCATGATC GGCCAAATAATGGGAAGCTACATTCCAGTCACGCTAGGCTGGCGCTGGCTTGAGTGGATAATGCTTATCATGGGT GGGGTAGTTATGGCTCTGGTCCTGCTATTTCAACCCGAGACATATGGCAACCTAGTTCTCTACTGGAAGGCTTCC ATCCTTCGAAAAGAGACTGGTGATGAGAGATATAGGGCTCCCATGGAGATCAGTCAGAAGGGCCTGGGCCAGCGC TTGAAGATCTCTGTGTATCGGCCATTTGCGATGTTCTATTCGGAGCTAATCATCATCTTGATGTCGCTATATCTG ACCATTATTTATATCGTCCTCTTCACTTTTCTCGAGGGGTATGCCTACATCTTTGGCGACATATATGGCCTCTCC GAAGGACTGACCAACCTTTGCTGGGCTGGGATGCTTGTTGGGACTTTGCTGGTTAGCGGCGTGGTGCCGGTAGTT TACAGCTGGACTGCGAAGGCCTATGCTAGAGATAAGTTCACTATTGCTCCTGAGATGAGACTCTGGTATACCATG CTTGGTGGTGCAGTGGCAGTGCCGATCAGTCTGTTCTGGATGGGTTGGACAAGCAATCCAAAAATCTCAATCTGG TCCCCTCTCATCGCGTCAGTCCTTTTCGGCTACGGTATAACCACCATCTTCATTGTTGCATACATGTATCTCATT GATTCTTACGATACATATTCGGCCTCTGCATTAGGATTTCTCGTGTTCACGCGATATGTGGTGGCGGGAGGTGTA ACTGTTGCGGGTGGCCCCATTTACGAGGCTCTCGGCGTGCAGTATACCCTGACTATTCTGGGGTCCATCAGTGCA GTTATGGCGTTGGTGCCTTATCTGCTTTATTTCTATGGGCCAATGATCCGCAAGAAGAGTAAATATGCGGTGAAT ATTGATACCGAGTGA |
| Transcript | >Ani_SJS100_1|g5176.t1 ATGGAGGCATATCTCCAGTACCAACGGATTCGGAAATCCGTGCAACAGCACTTGGCAGAGCTGAAAGATAATTGC AGCTGTCCGAGCTACCCTATCGGCGCTCATCATGGCCCCAACTGCAAACTGAGCGGCTATTGCAGTACCCAGGAG AAAAGACCTACCGAATCGATGGCCCCTGACGCTGCGATTCTTGTGGACTGGGACGGACAAGATGATCCTTTGAAC CCCGCAAATCAGAGTACATCGCGGAAGCTCTTCATGACCTTCTTGGTCTCATTGATTGCAGTGGCCGTAACTGCT GCATCGGCGATCGATGCTTGTGGAGTCAAGGAGTATAGCCAATACTTCCACGTATCGGAAGTTGTTGGGTCTCTA GCGACAGGTCTGTTCCTTATCGGATTTGCATTTGGTTCCCTTCTCTCGGGCCCTTTCTCAGAAACCTTCGGGCGT AATGCCATATATTCAACAACAATGCTCCTCTTCTTAGTCTTCGTCATGGCATCAGGACTAGCCCCAAACCTCCAC AGTCACCTTATCTTCCGTTTCTTTGCCGGCCTCTTCGCTTCCACTCCGCTAACCTGCGCCGGTGGTACGGTTGCC GACTTATGGAACCCTCTGGAAAAGACCTATGCTTTTCCAGCTTACGCTATACCTGCATTTATCGGGCCCATGATC GGCCAAATAATGGGAAGCTACATTCCAGTCACGCTAGGCTGGCGCTGGCTTGAGTGGATAATGCTTATCATGGGT GGGGTAGTTATGGCTCTGGTCCTGCTATTTCAACCCGAGACATATGGCAACCTAGTTCTCTACTGGAAGGCTTCC ATCCTTCGAAAAGAGACTGGTGATGAGAGATATAGGGCTCCCATGGAGATCAGTCAGAAGGGCCTGGGCCAGCGC TTGAAGATCTCTGTGTATCGGCCATTTGCGATGTTCTATTCGGAGCTAATCATCATCTTGATGTCGCTATATCTG ACCATTATTTATATCGTCCTCTTCACTTTTCTCGAGGGGTATGCCTACATCTTTGGCGACATATATGGCCTCTCC GAAGGACTGACCAACCTTTGCTGGGCTGGGATGCTTGTTGGGACTTTGCTGGTTAGCGGCGTGGTGCCGGTAGTT TACAGCTGGACTGCGAAGGCCTATGCTAGAGATAAGTTCACTATTGCTCCTGAGATGAGACTCTGGTATACCATG CTTGGTGGTGCAGTGGCAGTGCCGATCAGTCTGTTCTGGATGGGTTGGACAAGCAATCCAAAAATCTCAATCTGG TCCCCTCTCATCGCGTCAGTCCTTTTCGGCTACGGTATAACCACCATCTTCATTGTTGCATACATGTATCTCATT GATTCTTACGATACATATTCGGCCTCTGCATTAGGATTTCTCGTGTTCACGCGATATGTGGTGGCGGGAGGTGTA ACTGTTGCGGGTGGCCCCATTTACGAGGCTCTCGGCGTGCAGTATACCCTGACTATTCTGGGGTCCATCAGTGCA GTTATGGCGTTGGTGCCTTATCTGCTTTATTTCTATGGGCCAATGATCCGCAAGAAGAGTAAATATGCGGTGAAT ATTGATACCGAGTGA |
| Gene | >Ani_SJS100_1|g5176.t1 ATGGAGGCATATCTCCAGTACCAACGGATTCGGAAATCCGTGCAACAGCACTTGGCAGAGCTGAAAGATAATTGC AGCTGTCCGAGCTACCCTATCGGCGCTCATCATGGCCCCAAGTAAGTCTTGGAGAAAATGTAATTAGGCTTGCAA CTGTCTAACAGAACACCATGTAGCTGCAAACTGAGCGGCTATTGCAGTACCCAGGAGAAAAGACCTACCGAATCG ATGGCCCCTGACGCTGCGATTCTTGTGGACTGGGACGGACAAGATGATCCTTTGAACCCCGCAAATCAGAGTACA TCGCGGAAGCTCTTCATGACCTTCTTGGTCTCATTGATTGCAGTGGCCGTAACTGCTGCATCGGCGATCGATGCT TGTGGAGTCAAGGAGTATAGCCAATACTTCCACGTATCGGAAGTTGTTGGGTCTCTAGCGACAGGTATGGCGTCT TCTCTCTGGAATCTATTATAGCAAAGAGCTGAACTCCTCATGTCTCTGAATAGGTCTGTTCCTTATCGGATTTGC ATTTGGTTCCCTTCTCTCGGGCCCTTTCTCAGAAACCTTCGGGCGTAATGCCATATATTCAACAACAATGCTCCT CTTCTTAGTCTTCGTCATGGCATCAGGACTAGCCCCAAACCTCCACAGTCACCTTATCTTCCGTTTCTTTGCCGG CCTCTTCGCTTCCACTCCGCTAACCTGCGCCGGTGGTACGGTTGCCGACTTATGGAACCCTCTGGAAAAGACCTA TGCTTTTCCAGCTTACGCTATACCTGCATTTATCGGGCCCATGATCGGCCAAATAATGGGAAGCTACATTCCAGT CACGCTAGGCTGGCGCTGGCTTGAGTGGATAATGCTTATCATGGGTGGGGTAGTTATGGCTCTGGTCCTGCTATT TCAACCCGAGACATATGGCAACCTAGTTCTCTACTGGAAGGCTTCCATCCTTCGAAAAGAGACTGGTGATGAGAG ATATAGGGCTCCCATGGAGATCAGTCAGAAGGGCCTGGGCCAGCGCTTGAAGATCTCTGTGTATCGGCCATTTGC GATGTTCTATTCGGAGCTAATCATCATCTTGATGTCGCTATATCTGACCATTATTTATATCGTCCTCTTCACTTT TCTCGAGGGGTATGCCTACATCTTTGGCGACATATATGGCCTCTCCGAAGGACTGACCAACCTTTGCTGGGCTGG GATGCTTGTTGGGACTTTGCTGGTTAGCGGCGTGGTGCCGGTAGTTTACAGCTGGACTGCGAAGGCCTATGCTAG AGATAAGTTCACTATTGCTCCTGAGATGAGACTCTGGTATACCATGCTTGGTGGTGCAGTGGCAGTGCCGATCAG TCTGTTCTGGATGGGTTGGACAAGCAATGTAAGTCTATACGGATACCCTCACAGGTTTTGCAGGCGCTAAGATAT ATTTCCTCTTTCAACAGCCAAAAATCTCAATCTGGTCCCCTCTCATCGCGTCAGTCCTTTTCGGCTACGGTATAA CCACCATCTTCATTGTTGCATACATGTATCTCATTGATTCTTACGATACATATTCGGCCTCTGCATTAGGATTTC TCGTGTTCACGCGATATGTGGTGGCGGGAGGTGTAACTGTTGCGGGTGGCCCCATTTACGAGGCTCTCGGCGTGC AGTATACCCTGACTATTCTGGGGTCCATCAGTGCAGTTATGGCGTTGGTGCCTTATCTGCTTTATTTCTATGGGC CAATGATCCGCAAGAAGAGTAAATATGCGGTGAATATTGATACCGAGTGA |