© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g5172.t1 |
| Gene name | |
| Location | scaffold_028:126919..128725 |
| Strand | - |
| Gene length (bp) | 1806 |
| Transcript length (bp) | 1701 |
| Coding sequence length (bp) | 1701 |
| Protein length (aa) | 567 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 3.2E-17 | 131 | 563 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 91 | 113 | 22 |
| 2 | 133 | 152 | 19 |
| 3 | 159 | 178 | 19 |
| 4 | 188 | 210 | 22 |
| 5 | 222 | 241 | 19 |
| 6 | 285 | 304 | 19 |
| 7 | 368 | 390 | 22 |
| 8 | 418 | 440 | 22 |
| 9 | 452 | 469 | 17 |
| 10 | 474 | 496 | 22 |
| 11 | 508 | 530 | 22 |
| 12 | 535 | 557 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5172.t1 MGADRIAVANDGMTRERNIEAQSAFASTLVVDVEKAPHSKEVPTDRPHTNVYGSTIDTPTSVAGTDAVYAAKAAL LNQALMDMGMGLYQWLLFIITSVGWFLDSFWLMSFTVIAPSSANEAQFFFTDNKEAYLFISMYVGLTTGSTAWPW MSDMLGRKWIFTSTLVLMGMGGLVGAGMPSFTGLCVVGFVVGFAVAGNQVVDAMILLESVPASHQFLVSMQGAMW GLGQLVAAAVGWAFIAEYTCGTGPDEISTGTALSHQSRADHSSSSSSSQCHYVSNKGWRYVWWTFGCMTLFLYLC RFAFPLRETPKYLLSKRRDAEATQLVKDIAAYSNRKTWLEESSFARIDSTVDASAPESRRQSRTKSLLSSAGAIG LPVLCLLWAVAGLTFTLHKTYISKYLATKGVEAVSATSVTTGYLYSRYLYVALCAIPGPIVVGLLIEAKGLGRKR TGSIVAVLTGLFMFLATVSRSRNALLAFECILSFLQTATMAVLVTYSVEVFAAPFRGFGLGVVGFCWGLFGLIAS IITTFESTVADGAAVWFCGAIWVIMGGAWMVVPETKGRAAA* |
| Coding | >Ani_SJS100_1|g5172.t1 ATGGGTGCAGACCGTATTGCAGTGGCCAATGATGGCATGACTCGTGAGAGAAACATCGAGGCTCAGAGTGCCTTC GCTTCTACTTTGGTGGTGGATGTCGAGAAGGCGCCTCATTCTAAGGAAGTGCCCACTGACAGACCGCATACCAAT GTCTATGGCTCCACTATTGACACTCCCACTTCTGTGGCTGGAACCGATGCCGTCTATGCGGCTAAGGCGGCGCTT CTGAACCAGGCGCTGATGGATATGGGTATGGGGTTGTATCAGTGGTTGCTCTTTATTATCACCAGTGTGGGATGG TTTCTCGATAGTTTCTGGTTGATGTCCTTCACGGTCATCGCCCCCTCCAGCGCCAATGAAGCCCAGTTCTTCTTC ACCGACAACAAAGAGGCCTACCTCTTCATCAGTATGTACGTCGGTCTGACCACGGGCTCCACCGCCTGGCCCTGG ATGTCCGACATGCTGGGCCGGAAGTGGATCTTCACGAGCACCCTGGTCCTTATGGGCATGGGTGGCCTCGTCGGT GCTGGAATGCCGTCTTTCACCGGCCTTTGTGTCGTTGGCTTCGTTGTCGGCTTTGCAGTGGCTGGCAACCAGGTC GTGGATGCGATGATTCTGCTCGAATCTGTTCCCGCATCTCACCAGTTCCTTGTCTCCATGCAGGGTGCCATGTGG GGACTGGGTCAGCTGGTAGCAGCAGCTGTCGGATGGGCATTTATCGCTGAATACACTTGCGGCACCGGTCCCGAC GAGATCAGCACCGGCACAGCCCTCTCCCACCAGTCCCGCGCCGACCACTCCAGCAGCAGCAGCAGCTCCCAATGC CATTACGTCTCCAACAAGGGCTGGCGCTACGTCTGGTGGACCTTCGGCTGTATGACACTCTTTCTGTACTTGTGC CGGTTTGCCTTCCCGCTGCGCGAAACCCCCAAGTATCTGCTCTCCAAGCGCCGCGACGCCGAAGCCACCCAGCTC GTCAAGGACATCGCCGCCTACAGCAACCGTAAGACCTGGCTGGAGGAGTCCTCCTTTGCGCGCATTGACTCGACC GTTGATGCCAGCGCCCCCGAGTCCCGTCGCCAGTCGCGCACCAAGTCCCTCCTGTCCTCTGCCGGAGCCATCGGC CTCCCCGTTCTCTGTCTCCTCTGGGCCGTCGCCGGGTTGACTTTCACCCTGCACAAAACCTACATCAGCAAGTAC CTCGCCACTAAGGGTGTCGAGGCGGTATCAGCTACCTCCGTGACTACTGGATACCTCTACAGCCGGTACCTGTAC GTTGCGCTGTGCGCTATCCCCGGCCCGATCGTGGTGGGTCTTCTCATTGAGGCGAAGGGACTGGGTCGCAAGCGC ACGGGATCTATTGTCGCTGTGCTGACCGGTTTGTTCATGTTTCTCGCGACGGTGTCGCGGTCGAGGAATGCGCTG CTCGCGTTCGAATGTATCCTGTCGTTCTTGCAGACGGCGACGATGGCGGTGCTAGTTACGTACTCCGTCGAGGTG TTTGCGGCACCGTTCCGGGGTTTCGGGCTGGGAGTCGTCGGATTCTGCTGGGGATTGTTTGGGTTGATTGCTAGT ATTATTACGACGTTCGAGAGCACTGTTGCCGATGGTGCGGCGGTGTGGTTCTGTGGTGCTATTTGGGTGATCATG GGTGGTGCTTGGATGGTTGTGCCGGAGACGAAGGGTCGGGCTGCTGCTTAG |
| Transcript | >Ani_SJS100_1|g5172.t1 ATGGGTGCAGACCGTATTGCAGTGGCCAATGATGGCATGACTCGTGAGAGAAACATCGAGGCTCAGAGTGCCTTC GCTTCTACTTTGGTGGTGGATGTCGAGAAGGCGCCTCATTCTAAGGAAGTGCCCACTGACAGACCGCATACCAAT GTCTATGGCTCCACTATTGACACTCCCACTTCTGTGGCTGGAACCGATGCCGTCTATGCGGCTAAGGCGGCGCTT CTGAACCAGGCGCTGATGGATATGGGTATGGGGTTGTATCAGTGGTTGCTCTTTATTATCACCAGTGTGGGATGG TTTCTCGATAGTTTCTGGTTGATGTCCTTCACGGTCATCGCCCCCTCCAGCGCCAATGAAGCCCAGTTCTTCTTC ACCGACAACAAAGAGGCCTACCTCTTCATCAGTATGTACGTCGGTCTGACCACGGGCTCCACCGCCTGGCCCTGG ATGTCCGACATGCTGGGCCGGAAGTGGATCTTCACGAGCACCCTGGTCCTTATGGGCATGGGTGGCCTCGTCGGT GCTGGAATGCCGTCTTTCACCGGCCTTTGTGTCGTTGGCTTCGTTGTCGGCTTTGCAGTGGCTGGCAACCAGGTC GTGGATGCGATGATTCTGCTCGAATCTGTTCCCGCATCTCACCAGTTCCTTGTCTCCATGCAGGGTGCCATGTGG GGACTGGGTCAGCTGGTAGCAGCAGCTGTCGGATGGGCATTTATCGCTGAATACACTTGCGGCACCGGTCCCGAC GAGATCAGCACCGGCACAGCCCTCTCCCACCAGTCCCGCGCCGACCACTCCAGCAGCAGCAGCAGCTCCCAATGC CATTACGTCTCCAACAAGGGCTGGCGCTACGTCTGGTGGACCTTCGGCTGTATGACACTCTTTCTGTACTTGTGC CGGTTTGCCTTCCCGCTGCGCGAAACCCCCAAGTATCTGCTCTCCAAGCGCCGCGACGCCGAAGCCACCCAGCTC GTCAAGGACATCGCCGCCTACAGCAACCGTAAGACCTGGCTGGAGGAGTCCTCCTTTGCGCGCATTGACTCGACC GTTGATGCCAGCGCCCCCGAGTCCCGTCGCCAGTCGCGCACCAAGTCCCTCCTGTCCTCTGCCGGAGCCATCGGC CTCCCCGTTCTCTGTCTCCTCTGGGCCGTCGCCGGGTTGACTTTCACCCTGCACAAAACCTACATCAGCAAGTAC CTCGCCACTAAGGGTGTCGAGGCGGTATCAGCTACCTCCGTGACTACTGGATACCTCTACAGCCGGTACCTGTAC GTTGCGCTGTGCGCTATCCCCGGCCCGATCGTGGTGGGTCTTCTCATTGAGGCGAAGGGACTGGGTCGCAAGCGC ACGGGATCTATTGTCGCTGTGCTGACCGGTTTGTTCATGTTTCTCGCGACGGTGTCGCGGTCGAGGAATGCGCTG CTCGCGTTCGAATGTATCCTGTCGTTCTTGCAGACGGCGACGATGGCGGTGCTAGTTACGTACTCCGTCGAGGTG TTTGCGGCACCGTTCCGGGGTTTCGGGCTGGGAGTCGTCGGATTCTGCTGGGGATTGTTTGGGTTGATTGCTAGT ATTATTACGACGTTCGAGAGCACTGTTGCCGATGGTGCGGCGGTGTGGTTCTGTGGTGCTATTTGGGTGATCATG GGTGGTGCTTGGATGGTTGTGCCGGAGACGAAGGGTCGGGCTGCTGCTTAG |
| Gene | >Ani_SJS100_1|g5172.t1 ATGGGTGCAGACCGTATTGCAGTGGCCAATGATGGCATGACTCGTGAGAGAAACATCGAGGCTCAGAGTGCCTTC GCTTCTACTTTGGTGGTGGATGTCGAGAAGGCGCCTCATTCTAAGGAAGTGCCCACTGACAGACCGCATACCAAT GTCTATGGCTCCACTATTGACACTCCCACTTCTGTGGCTGGAACCGATGCCGTCTATGCGGCTAAGGCGGCGCTT CTGAACCAGGCGCTGATGGATATGGGTATGGGGTTGTATCAGTGGTTGCTCTTTATTATCACCAGTGTGGGATGG TTTCTCGATAGTGTATGCCTCCATATGAACAGTGGAAAAGTGAAGAAACATTTACTGATCAGTACAGTTCTGGTT GATGTCCTTCACGGTCATCGCCCCCTCCAGCGCCAATGAAGCCCAGTTCTTCTTCACCGACAACAAAGAGGCCTA CCTCTTCATCAGTATGTACGTCGGTCTGACCACGGGCTCCACCGCCTGGCCCTGGATGTCCGACATGCTGGGCCG GAAGTGGATCTTCACGAGCACCCTGGTCCTTATGGGCATGGGTGGCCTCGTCGGTGCTGGAATGCCGTCTTTCAC CGGCCTTTGTGTCGTTGGCTTCGTTGTCGGCTTTGCAGTGGCTGGCAACCAGGTCGTGGATGCGATGATTCTGCT CGAATCTGTTCCCGCATCTCACCAGTTCCTTGTCTCCATGCAGGGTGCCATGTGGGGACTGGGTCAGCTGGTAGC AGCAGCTGTCGGATGGTAAGTCTACCTACTGTCAGACACCATACCACGCAATCTAACAACCACAGGGCATTTATC GCTGAATACACTTGCGGCACCGGTCCCGACGAGATCAGCACCGGCACAGCCCTCTCCCACCAGTCCCGCGCCGAC CACTCCAGCAGCAGCAGCAGCTCCCAATGCCATTACGTCTCCAACAAGGGCTGGCGCTACGTCTGGTGGACCTTC GGCTGTATGACACTCTTTCTGTACTTGTGCCGGTTTGCCTTCCCGCTGCGCGAAACCCCCAAGTATCTGCTCTCC AAGCGCCGCGACGCCGAAGCCACCCAGCTCGTCAAGGACATCGCCGCCTACAGCAACCGTAAGACCTGGCTGGAG GAGTCCTCCTTTGCGCGCATTGACTCGACCGTTGATGCCAGCGCCCCCGAGTCCCGTCGCCAGTCGCGCACCAAG TCCCTCCTGTCCTCTGCCGGAGCCATCGGCCTCCCCGTTCTCTGTCTCCTCTGGGCCGTCGCCGGGTTGACTTTC ACCCTGCACAAAACCTACATCAGCAAGTACCTCGCCACTAAGGGTGTCGAGGCGGTATCAGCTACCTCCGTGACT ACTGGATACCTCTACAGCCGGTACCTGTACGTTGCGCTGTGCGCTATCCCCGGCCCGATCGTGGTGGGTCTTCTC ATTGAGGCGAAGGGACTGGGTCGCAAGCGCACGGGATCTATTGTCGCTGTGCTGACCGGTTTGTTCATGTTTCTC GCGACGGTGTCGCGGTCGAGGAATGCGCTGCTCGCGTTCGAATGTATCCTGTCGTTCTTGCAGACGGCGACGATG GCGGTGCTAGTTACGTACTCCGTCGAGGTGTTTGCGGCACCGTTCCGGGGTTTCGGGCTGGGAGTCGTCGGATTC TGCTGGGGATTGTTTGGGTTGATTGCTAGTATTATTACGACGTTCGAGAGCACTGTTGCCGATGGTGCGGCGGTG TGGTTCTGTGGTGCTATTTGGGTGATCATGGGTGGTGCTTGGATGGTTGTGCCGGAGACGAAGGGTCGGGCTGCT GCTTAG |