Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g5170.t1
Gene name
Location	scaffold_028:124482..125511
Strand	+
Gene length (bp)	1029
Transcript length (bp)	1029
Coding sequence length (bp)	1029
Protein length (aa)	343

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF18142	SLATT_fungal	SMODS and SLOG-associating 2TM effector domain	5.2E-33	130	248

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	144	166	22
2	176	198	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g5170.t1 MAVPNRRPNFARRLLHAAFDREEQGLPPIPQGQSHHTNPPYDIPIPNGSASTMPTPTPPSNISTHGPMPPLHPPA NKPPLTISTTQASSLIPPQDKLLVFRALTGIDSIPALNTLHHFSRTAPNIGIYTRVVEAEKSAATRYRFFSILIN VCLGIQIVVAAALTALGAASGPHSAVTAFGAINTIMAGVLTYLKGSGLPDRLKHYQNEWRNIREYIEQRERELCL AGCSLDIQDEIQFIEYMYEGVKREIEATKSGENRSNAREGLNRRAFLPRQGQIQQQPPQGEGHNYGYGYSHQGQQ PQAYPQPYPQAPVQGQTQAYPHDPRMSSPVRSPEPVMLEKTH*
Coding	>Ani_SJS100_1\|g5170.t1 ATGGCCGTCCCTAATCGCCGTCCCAACTTCGCTCGACGGCTTCTCCACGCCGCCTTCGACCGCGAAGAACAAGGC CTGCCTCCAATCCCACAAGGACAATCTCACCACACCAACCCACCCTATGACATCCCCATCCCGAACGGCAGCGCG AGCACCATGCCAACTCCCACTCCTCCATCCAACATTTCAACACACGGCCCCATGCCACCACTCCACCCACCCGCA AACAAACCCCCTCTCACCATCTCCACGACACAAGCCAGCTCCCTCATTCCACCCCAAGACAAGCTCCTTGTCTTC CGTGCCCTCACCGGCATCGACAGCATCCCTGCCCTTAACACCCTCCACCACTTCAGCCGCACCGCCCCCAACATC GGCATCTACACGCGCGTCGTCGAGGCCGAAAAGTCTGCTGCCACGCGCTACCGCTTCTTCAGCATCCTCATCAAC GTCTGTCTGGGCATTCAGATCGTTGTGGCCGCTGCCCTGACGGCCCTCGGCGCCGCTAGTGGCCCCCATTCCGCC GTGACGGCCTTTGGCGCCATCAACACGATCATGGCCGGCGTGCTGACTTACCTGAAGGGCTCGGGGCTTCCGGAT CGATTGAAACACTATCAGAATGAGTGGCGGAATATTCGCGAGTATATTGAGCAGCGCGAGCGCGAGCTGTGTCTG GCTGGTTGTTCGTTGGATATCCAGGATGAGATCCAGTTCATCGAGTATATGTATGAGGGCGTGAAGAGGGAGATT GAAGCTACAAAGAGTGGGGAAAATCGATCAAATGCGAGAGAGGGACTGAATCGCCGGGCGTTTCTGCCGAGACAG GGTCAGATACAGCAACAACCTCCCCAGGGAGAGGGACACAATTACGGCTACGGCTACAGCCACCAGGGACAACAA CCGCAGGCGTACCCACAACCATACCCACAGGCACCAGTCCAGGGTCAGACACAGGCTTACCCGCATGACCCACGG ATGTCAAGTCCGGTGCGGAGTCCGGAGCCTGTCATGTTGGAGAAGACTCATTAG
Transcript	>Ani_SJS100_1\|g5170.t1 ATGGCCGTCCCTAATCGCCGTCCCAACTTCGCTCGACGGCTTCTCCACGCCGCCTTCGACCGCGAAGAACAAGGC CTGCCTCCAATCCCACAAGGACAATCTCACCACACCAACCCACCCTATGACATCCCCATCCCGAACGGCAGCGCG AGCACCATGCCAACTCCCACTCCTCCATCCAACATTTCAACACACGGCCCCATGCCACCACTCCACCCACCCGCA AACAAACCCCCTCTCACCATCTCCACGACACAAGCCAGCTCCCTCATTCCACCCCAAGACAAGCTCCTTGTCTTC CGTGCCCTCACCGGCATCGACAGCATCCCTGCCCTTAACACCCTCCACCACTTCAGCCGCACCGCCCCCAACATC GGCATCTACACGCGCGTCGTCGAGGCCGAAAAGTCTGCTGCCACGCGCTACCGCTTCTTCAGCATCCTCATCAAC GTCTGTCTGGGCATTCAGATCGTTGTGGCCGCTGCCCTGACGGCCCTCGGCGCCGCTAGTGGCCCCCATTCCGCC GTGACGGCCTTTGGCGCCATCAACACGATCATGGCCGGCGTGCTGACTTACCTGAAGGGCTCGGGGCTTCCGGAT CGATTGAAACACTATCAGAATGAGTGGCGGAATATTCGCGAGTATATTGAGCAGCGCGAGCGCGAGCTGTGTCTG GCTGGTTGTTCGTTGGATATCCAGGATGAGATCCAGTTCATCGAGTATATGTATGAGGGCGTGAAGAGGGAGATT GAAGCTACAAAGAGTGGGGAAAATCGATCAAATGCGAGAGAGGGACTGAATCGCCGGGCGTTTCTGCCGAGACAG GGTCAGATACAGCAACAACCTCCCCAGGGAGAGGGACACAATTACGGCTACGGCTACAGCCACCAGGGACAACAA CCGCAGGCGTACCCACAACCATACCCACAGGCACCAGTCCAGGGTCAGACACAGGCTTACCCGCATGACCCACGG ATGTCAAGTCCGGTGCGGAGTCCGGAGCCTGTCATGTTGGAGAAGACTCATTAG
Gene	>Ani_SJS100_1\|g5170.t1 ATGGCCGTCCCTAATCGCCGTCCCAACTTCGCTCGACGGCTTCTCCACGCCGCCTTCGACCGCGAAGAACAAGGC CTGCCTCCAATCCCACAAGGACAATCTCACCACACCAACCCACCCTATGACATCCCCATCCCGAACGGCAGCGCG AGCACCATGCCAACTCCCACTCCTCCATCCAACATTTCAACACACGGCCCCATGCCACCACTCCACCCACCCGCA AACAAACCCCCTCTCACCATCTCCACGACACAAGCCAGCTCCCTCATTCCACCCCAAGACAAGCTCCTTGTCTTC CGTGCCCTCACCGGCATCGACAGCATCCCTGCCCTTAACACCCTCCACCACTTCAGCCGCACCGCCCCCAACATC GGCATCTACACGCGCGTCGTCGAGGCCGAAAAGTCTGCTGCCACGCGCTACCGCTTCTTCAGCATCCTCATCAAC GTCTGTCTGGGCATTCAGATCGTTGTGGCCGCTGCCCTGACGGCCCTCGGCGCCGCTAGTGGCCCCCATTCCGCC GTGACGGCCTTTGGCGCCATCAACACGATCATGGCCGGCGTGCTGACTTACCTGAAGGGCTCGGGGCTTCCGGAT CGATTGAAACACTATCAGAATGAGTGGCGGAATATTCGCGAGTATATTGAGCAGCGCGAGCGCGAGCTGTGTCTG GCTGGTTGTTCGTTGGATATCCAGGATGAGATCCAGTTCATCGAGTATATGTATGAGGGCGTGAAGAGGGAGATT GAAGCTACAAAGAGTGGGGAAAATCGATCAAATGCGAGAGAGGGACTGAATCGCCGGGCGTTTCTGCCGAGACAG GGTCAGATACAGCAACAACCTCCCCAGGGAGAGGGACACAATTACGGCTACGGCTACAGCCACCAGGGACAACAA CCGCAGGCGTACCCACAACCATACCCACAGGCACCAGTCCAGGGTCAGACACAGGCTTACCCGCATGACCCACGG ATGTCAAGTCCGGTGCGGAGTCCGGAGCCTGTCATGTTGGAGAAGACTCATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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