© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5163.t1 |
| Gene name | |
| Location | scaffold_028:106791..107771 |
| Strand | - |
| Gene length (bp) | 980 |
| Transcript length (bp) | 732 |
| Coding sequence length (bp) | 732 |
| Protein length (aa) | 244 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02656 | DUF202 | Domain of unknown function (DUF202) | 3.2E-15 | 124 | 198 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 52 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 134 | 156 | 22 |
| 2 | 171 | 193 | 22 |
| 3 | 214 | 236 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5163.t1 MVDRQDNHSAPDKAIAAATGREDILTPPAACHTTQRPHRDDDDARSTDNDLDALELRNIATQDDDEAGFSTESIS SGEYRIRTHRTVSRTTHSNREHTSKGLAGYIRRFWTRNVVLTVPQKSNRDHFALERTFLAYIRTSVMVAMQGVLI AQLFRLQHLASPDTALGFYEVGIPLAVSCYGVAIFIAAMGAYRFWKQQNVVALGTVYAGGWELNCIGVLIGLIIL TTFILSLVITVELKHEDS* |
| Coding | >Ani_SJS100_1|g5163.t1 ATGGTTGATCGCCAGGACAATCACTCTGCACCGGACAAGGCGATCGCTGCAGCGACCGGTCGCGAGGATATTCTC ACCCCACCAGCTGCCTGCCACACAACTCAACGACCTCATCGCGATGATGACGACGCCAGAAGCACAGATAACGAC CTGGATGCCCTCGAACTCCGCAATATAGCCACTCAAGATGACGACGAGGCCGGCTTCTCAACCGAATCGATCTCC TCGGGCGAATATCGTATCCGCACACATCGGACCGTTTCCCGCACCACTCATTCCAACCGGGAGCACACAAGCAAG GGGCTGGCGGGATATATTCGTCGCTTTTGGACACGAAATGTGGTGTTGACAGTGCCGCAGAAGAGTAATCGGGAC CATTTCGCTTTAGAGCGAACTTTCTTAGCTTACATTCGTACTTCGGTCATGGTCGCCATGCAAGGTGTATTGATC GCCCAATTATTTCGACTCCAGCATTTAGCTTCGCCGGATACAGCACTGGGCTTCTATGAAGTGGGGATTCCCCTG GCGGTTAGCTGCTATGGCGTGGCAATTTTTATAGCTGCCATGGGCGCGTATCGCTTCTGGAAGCAGCAGAATGTG GTGGCTTTGGGGACAGTATATGCGGGGGGGTGGGAATTGAACTGTATCGGGGTGTTGATTGGGTTGATTATTTTG ACGACGTTTATACTATCCCTGGTTATTACCGTTGAGTTAAAACACGAGGATAGTTAG |
| Transcript | >Ani_SJS100_1|g5163.t1 ATGGTTGATCGCCAGGACAATCACTCTGCACCGGACAAGGCGATCGCTGCAGCGACCGGTCGCGAGGATATTCTC ACCCCACCAGCTGCCTGCCACACAACTCAACGACCTCATCGCGATGATGACGACGCCAGAAGCACAGATAACGAC CTGGATGCCCTCGAACTCCGCAATATAGCCACTCAAGATGACGACGAGGCCGGCTTCTCAACCGAATCGATCTCC TCGGGCGAATATCGTATCCGCACACATCGGACCGTTTCCCGCACCACTCATTCCAACCGGGAGCACACAAGCAAG GGGCTGGCGGGATATATTCGTCGCTTTTGGACACGAAATGTGGTGTTGACAGTGCCGCAGAAGAGTAATCGGGAC CATTTCGCTTTAGAGCGAACTTTCTTAGCTTACATTCGTACTTCGGTCATGGTCGCCATGCAAGGTGTATTGATC GCCCAATTATTTCGACTCCAGCATTTAGCTTCGCCGGATACAGCACTGGGCTTCTATGAAGTGGGGATTCCCCTG GCGGTTAGCTGCTATGGCGTGGCAATTTTTATAGCTGCCATGGGCGCGTATCGCTTCTGGAAGCAGCAGAATGTG GTGGCTTTGGGGACAGTATATGCGGGGGGGTGGGAATTGAACTGTATCGGGGTGTTGATTGGGTTGATTATTTTG ACGACGTTTATACTATCCCTGGTTATTACCGTTGAGTTAAAACACGAGGATAGTTAG |
| Gene | >Ani_SJS100_1|g5163.t1 ATGGTTGATCGCCAGGACAATCACTCTGCACCGGACAAGGCGATCGCTGCAGCGACCGGTCGCGAGGATATTCTC ACCCCACCAGCTGCCTGCCACACAACTCAACGACCTCATCGCGATGATGACGACGCCAGAAGCACAGATAACGAC CTGGATGCCCTCGAACTCCGCAATATAGCCACTCAAGATGACGACGAGGCCGGCTTCTCAACCGAATCGATCTCC TCGGGCGAATATCGTATCCGCACACATCGGACCGTTTCCCGCACCACTCATTCCAACCGGGAGCACACAAGCAAG GGGCTGGCGGGATATATTCGTCGCTTTTGGACACGAAATGTGGTGTTGACAGTGCCGCAGAAGAGTAATCGGGAC CATTTCGGTGAGTGGGCACCTCGTTTTCTGATATATACTTCGCATATTACTCCATCCGATGCATACATTCAATAC TATTGATGCCACTAAAATGGCGCAATCGCACGTGGCTATGGCGCCAGATAATCACGAGCTCATCCATTCACCAAC AATAACGCAGAAGGAATGCAAGGCTGCTGCTGACATCTCACACTATCCATTTAGCTTTAGAGCGAACTTTCTTAG CTTACATTCGTACTTCGGTCATGGTCGCCATGCAAGGTGTATTGATCGCCCAATTATTTCGACTCCAGCATTTAG CTTCGCCGGATACAGCACTGGGCTTCTATGAAGTGGGGATTCCCCTGGCGGTTAGCTGCTATGGCGTGGCAATTT TTATAGCTGCCATGGGCGCGTATCGCTTCTGGAAGCAGCAGAATGTGGTGGCTTTGGGGACAGTATATGCGGGGG GGTGGGAATTGAACTGTATCGGGGTGTTGATTGGGTTGGTGAGTTTGACTCGCTGCGTTTGAGTGGGATGGTGTT ACTAACAACAGTAGATTATTTTGACGACGTTTATACTATCCCTGGTTATTACCGTTGAGTTAAAACACGAGGATA GTTAG |