Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g516.t1
Gene name
Locationscaffold_002:202906..204111
Strand+
Gene length (bp)1205
Transcript length (bp)996
Coding sequence length (bp)996
Protein length (aa) 332

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10609 ParA NUBPL iron-transfer P-loop NTPase 5.5E-25 6 76
PF10609 ParA NUBPL iron-transfer P-loop NTPase 1.3E-57 100 273
PF01656 CbiA CobQ/CobB/MinD/ParA nucleotide binding domain 1.1E-09 10 273
PF09140 MipZ ATPase MipZ 9.4E-06 9 57

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g516.t1
MPLDGVKNVVLVLSGKGGVGKSSVTLQLALALTLQGKSVGILDIDLTGPSIPRLVGLEDAKITQAPGGWLPVPVH
PSTIITTPNASSTSQPDTTTTATETEGGSAIKHGSLRCMSLGFLLRSRSDAVIWRGPKKTAMIRQFLSDVLWNET
DYLLIDTPPGTSDEHIALAEQLLTLCTIDASSATGMPRLAGAVLVTTPQAVATSDVRKEVNFCVKTRIPMLGVVE
NMSGYTCPCCGEVTNLFSSGGGQVLAEEMGVRFLGKVPVDVGFGELVEGKIGGEEDSEDEDEDTNGEKKEEEEKD
ERPLVERYRECWSYARFEDFSKTLIAEIEGQ*
Coding >Ani_SJS100_1|g516.t1
ATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACC
CTGCAACTCGCCCTCGCGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACCGGCCCTTCA
ATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCAC
CCTTCCACCATCATCACCACACCCAATGCCTCCTCCACCTCACAACCAGATACAACAACAACGGCAACAGAAACA
GAAGGTGGAAGCGCCATAAAACACGGCTCTCTCCGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGAT
GCCGTAATCTGGCGCGGGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAACT
GATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTT
TGTACGATCGATGCTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAGGCG
GTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAG
AATATGTCTGGTTATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTG
GCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTACCCGTTGACGTTGGGTTTGGGGAATTGGTGGAGGGGAAG
ATTGGTGGGGAGGAGGATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAAGAGAAGGAT
GAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTATGCGCGGTTCGAGGACTTTTCGAAGACGTTGATT
GCGGAGATTGAGGGGCAATGA
Transcript >Ani_SJS100_1|g516.t1
ATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACC
CTGCAACTCGCCCTCGCGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACCGGCCCTTCA
ATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCAC
CCTTCCACCATCATCACCACACCCAATGCCTCCTCCACCTCACAACCAGATACAACAACAACGGCAACAGAAACA
GAAGGTGGAAGCGCCATAAAACACGGCTCTCTCCGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGAT
GCCGTAATCTGGCGCGGGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAACT
GATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTT
TGTACGATCGATGCTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAGGCG
GTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAG
AATATGTCTGGTTATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTG
GCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTACCCGTTGACGTTGGGTTTGGGGAATTGGTGGAGGGGAAG
ATTGGTGGGGAGGAGGATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAAGAGAAGGAT
GAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTATGCGCGGTTCGAGGACTTTTCGAAGACGTTGATT
GCGGAGATTGAGGGGCAATGA
Gene >Ani_SJS100_1|g516.t1
ATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTGAGTATTACTCTTCATTTACCTGAGCTCCAGCTCCAAACA
TCATTGCGACAACCCCTCCTCTCTTATCGATAACACCGCGCAACTGCGCACAGGATGGAAGGATGGCCACACCTA
CACATACAATGCGCGCACATCCTATCTACCTCTATCCATCTATACACCTTCCAATACATTGTCCAGAGAGAAGCT
AACAAGCTATCTCCCAGGTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCG
CGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACCGGCCCTTCAATCCCACGATTAGTCG
GTCTCGAAGACGCAAAAATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCACCATCATCA
CCACACCCAATGCCTCCTCCACCTCACAACCAGATACAACAACAACGGCAACAGAAACAGAAGGTGGAAGCGCCA
TAAAACACGGCTCTCTCCGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGCGCG
GGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAACTGATTACTTGCTTATTG
ATACGCCTCCCGGAACTAGTGATGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACGATCGATGCTT
CCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAGGCGGTAGCAACGTCTGATG
TACGGAAGGAGGTGAATTTCTGCGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTTATA
CGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTGGCAGAAGAGATGGGTG
TAAGGTTTTTGGGAAAGGTACCCGTTGACGTTGGGTTTGGGGAATTGGTGGAGGGGAAGATTGGTGGGGAGGAGG
ATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAAGAGAAGGATGAGAGGCCGCTAGTGG
AAAGGTATCGGGAATGTTGGTCGTATGCGCGGTTCGAGGACTTTTCGAAGACGTTGATTGCGGAGATTGAGGGGC
AATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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