© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5137.t1 |
| Gene name | |
| Location | scaffold_028:29997..31676 |
| Strand | - |
| Gene length (bp) | 1679 |
| Transcript length (bp) | 1617 |
| Coding sequence length (bp) | 1617 |
| Protein length (aa) | 539 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01048 | PNP_UDP_1 | Phosphorylase superfamily | 1.3E-09 | 15 | 309 |
| PF00931 | NB-ARC | NB-ARC domain | 5.7E-06 | 355 | 530 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003824 | catalytic activity | Yes |
| GO:0009116 | nucleoside metabolic process | Yes |
| GO:0043531 | ADP binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0008152 | metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0044238 | primary metabolic process | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0000166 | nucleotide binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0043168 | anion binding | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:1901657 | glycosyl compound metabolic process | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5137.t1 MPGNDIPSYDEFAVGWICALPLEMTAAKAVLDEEYPSLHLPEQHHNTYVLGRISGHKVVITCLPFGIYGTTSATA VVEQMLFTFRSIRFGLMVGIGGGVPSAVDVRLGDVVVSKPTAGLPGVIQYDYGKTVASGRFEQTGTLNKPPIVLL SALSSLEADRLAGGSDIGTYEKIIADSLRAAKDPSVFRYPGAEHDWLFDASYDHDPRFASCAECDPERRVRRKPR RSCTPVVHYGNIASGNQVMKHGLTRDRIAQTTQGILCFEMEAAGIMDYLPCLVIRGICDYSDSHKKKEWQGFAAL TAAAYAKLLLSKIPVHRSEASTLIQAPGSKNSSDSFDVRFDTIEMPQAAISVGREAELAMITKSLLSDRFRGIVT LYGMGGIGKTELSIMYIMRHRQKYSSVFWIDGSSLDKLYSSYTQAAMRIIHDHPGDQSLRKALKEGDQIQLVGSV NEWLSRPSNNRWLLIYDGFDLPMVEGFDKAEIMKMRLPPSKQGHIIITMRSYDIGIGDQIQVRKLAAIDDGLDLL THVCGRPNLRDGK* |
| Coding | >Ani_SJS100_1|g5137.t1 ATGCCGGGAAATGACATACCTTCTTACGATGAGTTTGCCGTGGGCTGGATCTGTGCCCTACCACTGGAGATGACC GCAGCTAAAGCCGTCCTCGACGAAGAATATCCAAGTCTACATTTACCTGAGCAGCATCACAACACCTACGTGCTT GGAAGGATTTCCGGGCATAAAGTGGTGATTACATGTCTTCCATTCGGGATTTACGGAACTACGTCGGCGACTGCG GTAGTTGAGCAGATGCTATTCACCTTTCGGTCCATCCGCTTTGGCCTCATGGTCGGGATTGGCGGAGGAGTCCCG TCTGCTGTCGATGTCAGACTGGGAGATGTGGTCGTAAGTAAGCCGACTGCTGGCCTTCCCGGAGTGATCCAGTAC GATTATGGCAAGACCGTTGCTTCAGGTCGCTTTGAGCAGACCGGGACACTCAACAAGCCGCCGATAGTTCTCCTA TCAGCGTTGTCGTCGCTGGAAGCAGATCGTCTGGCTGGAGGCAGCGACATTGGTACCTATGAGAAGATTATCGCG GATTCTCTAAGGGCTGCCAAAGATCCATCCGTGTTTCGGTATCCGGGTGCCGAACATGATTGGCTCTTCGATGCC TCCTATGACCATGATCCTCGCTTCGCATCCTGTGCTGAGTGTGACCCAGAACGACGGGTGAGACGCAAGCCTCGA CGCTCATGCACACCGGTCGTACATTATGGCAACATTGCGTCGGGCAATCAAGTCATGAAGCATGGCCTCACGCGC GATCGCATTGCGCAGACAACACAGGGGATCTTGTGTTTTGAAATGGAGGCGGCGGGGATCATGGATTACCTTCCG TGCCTCGTGATCAGAGGGATTTGTGACTATTCTGACTCCCACAAGAAGAAAGAGTGGCAGGGGTTCGCGGCTTTG ACAGCCGCGGCCTATGCGAAATTGCTATTGTCGAAGATTCCTGTCCATCGGAGTGAGGCGTCTACGCTGATACAG GCACCTGGTTCGAAGAATAGTAGCGATTCGTTCGATGTTCGCTTCGACACAATCGAAATGCCACAGGCTGCCATT TCTGTGGGCCGGGAGGCAGAGCTTGCAATGATAACGAAGAGTCTTCTATCAGACAGATTTCGAGGCATTGTCACC CTATATGGAATGGGTGGAATTGGGAAAACCGAACTCTCGATTATGTACATCATGCGCCATCGGCAAAAGTATTCA TCTGTCTTCTGGATTGATGGTAGCAGTCTTGACAAGTTATATTCCAGCTATACACAAGCGGCAATGCGGATCATA CATGATCATCCAGGTGACCAGTCTTTGAGAAAGGCCTTGAAGGAAGGTGATCAGATTCAATTGGTTGGATCAGTC AATGAGTGGCTGAGTCGCCCTTCAAACAATCGGTGGTTACTCATATACGATGGCTTCGACCTTCCTATGGTCGAA GGTTTTGACAAAGCCGAAATCATGAAAATGAGACTGCCTCCAAGCAAGCAGGGTCATATCATTATTACAATGAGA AGTTATGATATTGGAATAGGTGATCAGATTCAAGTAAGAAAGCTGGCAGCAATTGATGACGGCCTCGATCTTCTG ACTCATGTGTGCGGACGACCGAATCTACGAGATGGCAAGTAA |
| Transcript | >Ani_SJS100_1|g5137.t1 ATGCCGGGAAATGACATACCTTCTTACGATGAGTTTGCCGTGGGCTGGATCTGTGCCCTACCACTGGAGATGACC GCAGCTAAAGCCGTCCTCGACGAAGAATATCCAAGTCTACATTTACCTGAGCAGCATCACAACACCTACGTGCTT GGAAGGATTTCCGGGCATAAAGTGGTGATTACATGTCTTCCATTCGGGATTTACGGAACTACGTCGGCGACTGCG GTAGTTGAGCAGATGCTATTCACCTTTCGGTCCATCCGCTTTGGCCTCATGGTCGGGATTGGCGGAGGAGTCCCG TCTGCTGTCGATGTCAGACTGGGAGATGTGGTCGTAAGTAAGCCGACTGCTGGCCTTCCCGGAGTGATCCAGTAC GATTATGGCAAGACCGTTGCTTCAGGTCGCTTTGAGCAGACCGGGACACTCAACAAGCCGCCGATAGTTCTCCTA TCAGCGTTGTCGTCGCTGGAAGCAGATCGTCTGGCTGGAGGCAGCGACATTGGTACCTATGAGAAGATTATCGCG GATTCTCTAAGGGCTGCCAAAGATCCATCCGTGTTTCGGTATCCGGGTGCCGAACATGATTGGCTCTTCGATGCC TCCTATGACCATGATCCTCGCTTCGCATCCTGTGCTGAGTGTGACCCAGAACGACGGGTGAGACGCAAGCCTCGA CGCTCATGCACACCGGTCGTACATTATGGCAACATTGCGTCGGGCAATCAAGTCATGAAGCATGGCCTCACGCGC GATCGCATTGCGCAGACAACACAGGGGATCTTGTGTTTTGAAATGGAGGCGGCGGGGATCATGGATTACCTTCCG TGCCTCGTGATCAGAGGGATTTGTGACTATTCTGACTCCCACAAGAAGAAAGAGTGGCAGGGGTTCGCGGCTTTG ACAGCCGCGGCCTATGCGAAATTGCTATTGTCGAAGATTCCTGTCCATCGGAGTGAGGCGTCTACGCTGATACAG GCACCTGGTTCGAAGAATAGTAGCGATTCGTTCGATGTTCGCTTCGACACAATCGAAATGCCACAGGCTGCCATT TCTGTGGGCCGGGAGGCAGAGCTTGCAATGATAACGAAGAGTCTTCTATCAGACAGATTTCGAGGCATTGTCACC CTATATGGAATGGGTGGAATTGGGAAAACCGAACTCTCGATTATGTACATCATGCGCCATCGGCAAAAGTATTCA TCTGTCTTCTGGATTGATGGTAGCAGTCTTGACAAGTTATATTCCAGCTATACACAAGCGGCAATGCGGATCATA CATGATCATCCAGGTGACCAGTCTTTGAGAAAGGCCTTGAAGGAAGGTGATCAGATTCAATTGGTTGGATCAGTC AATGAGTGGCTGAGTCGCCCTTCAAACAATCGGTGGTTACTCATATACGATGGCTTCGACCTTCCTATGGTCGAA GGTTTTGACAAAGCCGAAATCATGAAAATGAGACTGCCTCCAAGCAAGCAGGGTCATATCATTATTACAATGAGA AGTTATGATATTGGAATAGGTGATCAGATTCAAGTAAGAAAGCTGGCAGCAATTGATGACGGCCTCGATCTTCTG ACTCATGTGTGCGGACGACCGAATCTACGAGATGGCAAGTAA |
| Gene | >Ani_SJS100_1|g5137.t1 ATGCCGGGAAATGACATACCTTCTTACGATGAGTTTGCCGTGGGCTGGATCTGTGCCCTACCACTGGAGATGACC GCAGCTAAAGCCGTCCTCGACGAAGAATATCCAAGTCTACATTTACCTGAGCAGCATCACAACACCTACGTGCTT GGAAGGATTTCCGGGCATAAAGTGGTGATTACATGTCTTCCATTCGGGATTTACGGAACTACGTCGGCGACTGCG GTAGTTGAGCAGATGCTATTCACCTTTCGGTCCATCCGCTTTGGCCTCATGGTCGGGATTGGCGGAGGAGTCCCG TCTGCTGTCGATGTCAGACTGGGAGATGTGGTCGTAAGTAAGCCGACTGCTGGCCTTCCCGGAGTGATCCAGTAC GATTATGGCAAGACCGTTGCTTCAGGTCGCTTTGAGCAGACCGGGACACTCAACAAGCCGCCGATAGTTCTCCTA TCAGCGTTGTCGTCGCTGGAAGCAGATCGTCTGGCTGGAGGCAGCGACATTGGTACCTATGAGAAGATTATCGCG GATTCTCTAAGGGCTGCCAAAGATCCATCCGTGTTTCGGTATCCGGGTGCCGAACATGATTGGCTCTTCGATGCC TCCTATGACCATGATCCTCGCTTCGCATCCTGTGCTGAGTGTGACCCAGAACGACGGGTGAGACGCAAGCCTCGA CGCTCATGCACACCGGTCGTACATTATGGCAACATTGCGTCGGGCAATCAAGTCATGAAGCATGGCCTCACGCGC GATCGCATTGCGCAGACAACACAGGGGATCTTGTGTTTTGAAATGGAGGCGGCGGGGATCATGGATTACCTTCCG TGCCTCGTGATCAGAGGGATTTGTGACTATTCTGACTCCCACAAGAAGAAAGAGTGGCAGGGGTTCGCGGCTTTG ACAGCCGCGGCCTATGCGAAATTGCTATTGTCGAAGATTCCTGTCCATCGGAGTGAGGCGTCTACGCTGATACAG GCACCTGGTTCGAAGAATAGTAGTACGTGGGGCCCAAGCATGGTGTACTTTATACCCAGAGAGCTATTACTGATG TTAATGAAGGCGATTCGTTCGATGTTCGCTTCGACACAATCGAAATGCCACAGGCTGCCATTTCTGTGGGCCGGG AGGCAGAGCTTGCAATGATAACGAAGAGTCTTCTATCAGACAGATTTCGAGGCATTGTCACCCTATATGGAATGG GTGGAATTGGGAAAACCGAACTCTCGATTATGTACATCATGCGCCATCGGCAAAAGTATTCATCTGTCTTCTGGA TTGATGGTAGCAGTCTTGACAAGTTATATTCCAGCTATACACAAGCGGCAATGCGGATCATACATGATCATCCAG GTGACCAGTCTTTGAGAAAGGCCTTGAAGGAAGGTGATCAGATTCAATTGGTTGGATCAGTCAATGAGTGGCTGA GTCGCCCTTCAAACAATCGGTGGTTACTCATATACGATGGCTTCGACCTTCCTATGGTCGAAGGTTTTGACAAAG CCGAAATCATGAAAATGAGACTGCCTCCAAGCAAGCAGGGTCATATCATTATTACAATGAGAAGTTATGATATTG GAATAGGTGATCAGATTCAAGTAAGAAAGCTGGCAGCAATTGATGACGGCCTCGATCTTCTGACTCATGTGTGCG GACGACCGAATCTACGAGATGGCAAGTAA |