© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5130.t1 |
| Gene name | |
| Location | scaffold_028:5259..6482 |
| Strand | + |
| Gene length (bp) | 1223 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05875 | Ceramidase | Ceramidase | 9.8E-80 | 10 | 258 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006672 | ceramide metabolic process | Yes |
| GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006643 | membrane lipid metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | No |
| GO:0003674 | molecular_function | No |
| GO:0016787 | hydrolase activity | No |
| GO:0009987 | cellular process | No |
| GO:0008152 | metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0043603 | cellular amide metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006665 | sphingolipid metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 28 | 50 | 22 |
| 2 | 63 | 82 | 19 |
| 3 | 92 | 111 | 19 |
| 4 | 118 | 135 | 17 |
| 5 | 139 | 156 | 17 |
| 6 | 177 | 194 | 17 |
| 7 | 222 | 244 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5130.t1 MASAISPFWGAPTSYLNFCEEDYVITRYVAEFINTLSSFVYILYGIYGLWQLHSRRQTGPRSITYCGLIGVGVCS AGYHMTLKYHTQMSDELSMHLLTTPLLYRILSFQATPQYTKTVGIILSVLFTIVMVVHMVMDEFLLHAVTFGAAV CLITTRTLKIIPREIPDVEARKRIQSVALFGCASFIFGYLVWLIDEFVCQSLIVARHAVGLPVAFLLELHGWWHV FTAIGGYIAVAVIDLITSGEVQRDSVAQLAWPLPTVARLLGPAAGETKRE* |
| Coding | >Ani_SJS100_1|g5130.t1 ATGGCTTCCGCGATTTCGCCTTTCTGGGGTGCCCCGACCTCTTATTTGAACTTCTGTGAAGAGGACTATGTAATT ACGCGATATGTTGCGGAGTTTATTAATACTCTTAGCAGCTTTGTCTATATTCTATATGGCATCTACGGTCTCTGG CAGCTCCACAGCAGACGCCAAACCGGGCCACGCTCAATCACATACTGCGGATTGATTGGCGTCGGTGTTTGCTCT GCCGGTTACCATATGACTCTGAAATATCACACCCAGATGTCGGATGAACTTTCCATGCACCTCTTGACTACACCA CTCCTCTACCGCATTCTATCTTTCCAGGCCACCCCTCAGTACACAAAGACAGTAGGAATCATTCTCTCTGTACTG TTCACGATCGTCATGGTCGTCCACATGGTCATGGATGAGTTCCTGCTTCACGCCGTGACATTCGGGGCCGCAGTG TGTCTGATCACGACTCGCACGCTCAAGATCATTCCTCGCGAGATCCCGGACGTTGAGGCCCGTAAAAGGATTCAG TCCGTGGCGCTGTTTGGATGTGCAAGCTTCATCTTCGGATATCTCGTCTGGCTGATTGACGAGTTTGTGTGTCAA TCCTTGATCGTAGCCAGACACGCGGTCGGGCTACCCGTGGCGTTCTTGCTTGAGCTGCATGGCTGGTGGCATGTC TTCACTGCCATTGGTGGATATATCGCCGTGGCGGTCATTGATTTGATTACTTCCGGGGAAGTGCAACGGGACTCG GTTGCACAGCTCGCGTGGCCGCTGCCGACTGTTGCGAGGTTGCTTGGGCCTGCTGCAGGAGAGACGAAGCGGGAG TAG |
| Transcript | >Ani_SJS100_1|g5130.t1 ATGGCTTCCGCGATTTCGCCTTTCTGGGGTGCCCCGACCTCTTATTTGAACTTCTGTGAAGAGGACTATGTAATT ACGCGATATGTTGCGGAGTTTATTAATACTCTTAGCAGCTTTGTCTATATTCTATATGGCATCTACGGTCTCTGG CAGCTCCACAGCAGACGCCAAACCGGGCCACGCTCAATCACATACTGCGGATTGATTGGCGTCGGTGTTTGCTCT GCCGGTTACCATATGACTCTGAAATATCACACCCAGATGTCGGATGAACTTTCCATGCACCTCTTGACTACACCA CTCCTCTACCGCATTCTATCTTTCCAGGCCACCCCTCAGTACACAAAGACAGTAGGAATCATTCTCTCTGTACTG TTCACGATCGTCATGGTCGTCCACATGGTCATGGATGAGTTCCTGCTTCACGCCGTGACATTCGGGGCCGCAGTG TGTCTGATCACGACTCGCACGCTCAAGATCATTCCTCGCGAGATCCCGGACGTTGAGGCCCGTAAAAGGATTCAG TCCGTGGCGCTGTTTGGATGTGCAAGCTTCATCTTCGGATATCTCGTCTGGCTGATTGACGAGTTTGTGTGTCAA TCCTTGATCGTAGCCAGACACGCGGTCGGGCTACCCGTGGCGTTCTTGCTTGAGCTGCATGGCTGGTGGCATGTC TTCACTGCCATTGGTGGATATATCGCCGTGGCGGTCATTGATTTGATTACTTCCGGGGAAGTGCAACGGGACTCG GTTGCACAGCTCGCGTGGCCGCTGCCGACTGTTGCGAGGTTGCTTGGGCCTGCTGCAGGAGAGACGAAGCGGGAG TAG |
| Gene | >Ani_SJS100_1|g5130.t1 ATGGCTTCCGCGATTTCGCCTTTCTGGGGTGCCCCGACCTCTTATTTGAAGTATGTCAATTAATTAATAGCCAAT TGAAGTATACGTCGGAGACTAACCAATGTCGACAGCTTCTGTGAAGAGGTCCGTCTACAGCAAGCGCAATCTGGT CTTTTCTTGGCCCACAACAATAATCGCTGATTTGTCCTCTAGGACTATGTAATTACGCGATATGTTGCGGAGTTT ATTAATACTCTTAGCAGCTTTGTCTATAGTGCGTTTATTCCCCCCTTACAGTAGTCCACAAATTAACACTCTTCT CTAGTTCTATATGGCATCTACGGTCTCTGGCAGCTCCACAGCAGACGCCAAACCGGGCCACGCTCAATCACATAC TGCGGATTGATTGGCGTCGGTGTTTGCTCTGCCGGTTACCATATGACTCTGAAATATCACACCCAGATGTGTACT GCCTCCCTCTATTCTTCAGCTTACTCGGAATGATAATTATCGTGATCTGAGCTGATCCGTCTCAACAGCGGATGA ACTTTCCATGCACCTCTTGACTACACCACTCCTCTACCGCATTCTATCTTTCCAGGCCACCCCTCAGTACACAAA GACAGTAGGAATCATTCTCTCTGTACTGTTCACGATCGTCATGGTCGTCCACATGGTCATGGATGAGTTCCTGCT TCACGCCGTGACATTCGGGGCCGCAGTGTGTCTGATCACGACTCGCACGCTCAAGATCATTCCTCGCGAGATCCC GGACGTTGAGGCCCGTAAAAGGATTCAGTCCGTGGCGCTGTTTGGATGTGGTATGTTATCTACACTCTTATTATT GGCTTACCTACTAGGTGAATGAGATGAGAATGTAGTTAATTCTAACATGTATGCAGCAAGCTTCATCTTCGGATA TCTCGTCTGGCTGATTGACGAGTTTGTGTGTCAATCCTTGATCGTAGCCAGACACGCGGTCGGGCTACCCGTGGC GTTCTTGCTTGAGCTGCATGGCTGGTATGTAGATCTTTCCCCATGGTCCGGGATAAACTTGAACTTGGCTAACAA GTCATACAAGGTGGCATGTCTTCACTGCCATTGGTGGATATATCGCCGTGGCGGTCATTGATTTGATTACTTCCG GGGAAGTGCAACGGGACTCGGTTGCACAGCTCGCGTGGCCGCTGCCGACTGTTGCGAGGTTGCTTGGGCCTGCTG CAGGAGAGACGAAGCGGGAGTAG |