Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g5099.t1
Gene name
Location	scaffold_027:305770..306503
Strand	+
Gene length (bp)	733
Transcript length (bp)	636
Coding sequence length (bp)	636
Protein length (aa)	212

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09766	FmiP_Thoc5	Fms-interacting protein/Thoc5	7.2E-32	64	207

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g5099.t1 MAIRDIVANPSLLPVLGLSAETRDQCMKLLAVLDPTADLSDDPQERALAASREQKQLFALLARLRGQNRDAIMRV RETKQSTAEARQEIDRLHLQLQNLYYEQRHLTGEIAACESYDHKYRSLPLIPLEEFLALHPEHQQSDEHELMIAR INHEHAEREKLEQARQELLKRKQALIAENNKRKEDLASLDQDLERFIDAAKPIQKIFEKEY*
Coding	>Ani_SJS100_1\|g5099.t1 ATGGCCATCCGCGATATCGTCGCCAATCCCTCGCTGCTGCCCGTGCTCGGGCTCAGCGCCGAGACTCGCGATCAA TGCATGAAACTGTTGGCCGTACTCGACCCCACGGCTGATCTGTCCGATGACCCTCAAGAGCGTGCTCTGGCAGCC TCTCGCGAGCAGAAACAATTGTTTGCTCTTCTGGCTCGTCTGCGGGGCCAGAACCGGGATGCGATTATGCGCGTG CGCGAGACCAAGCAGTCCACTGCAGAAGCCCGCCAGGAGATTGACCGTCTCCATCTCCAACTCCAGAACTTGTAT TATGAACAGCGACATTTGACGGGCGAGATCGCCGCCTGCGAGTCCTACGATCACAAATATCGCTCCCTACCCTTG ATTCCCCTCGAAGAGTTTCTGGCTCTGCATCCCGAGCACCAGCAGTCCGATGAACACGAATTGATGATCGCTCGC ATCAATCACGAGCATGCGGAACGGGAGAAGCTGGAACAAGCACGACAGGAGCTGCTGAAGCGCAAGCAGGCCTTG ATCGCGGAGAACAACAAGCGCAAGGAGGATTTGGCAAGCTTGGATCAGGATTTAGAGCGGTTTATCGACGCGGCC AAACCGATCCAAAAGATCTTCGAAAAGGAATATTAA
Transcript	>Ani_SJS100_1\|g5099.t1 ATGGCCATCCGCGATATCGTCGCCAATCCCTCGCTGCTGCCCGTGCTCGGGCTCAGCGCCGAGACTCGCGATCAA TGCATGAAACTGTTGGCCGTACTCGACCCCACGGCTGATCTGTCCGATGACCCTCAAGAGCGTGCTCTGGCAGCC TCTCGCGAGCAGAAACAATTGTTTGCTCTTCTGGCTCGTCTGCGGGGCCAGAACCGGGATGCGATTATGCGCGTG CGCGAGACCAAGCAGTCCACTGCAGAAGCCCGCCAGGAGATTGACCGTCTCCATCTCCAACTCCAGAACTTGTAT TATGAACAGCGACATTTGACGGGCGAGATCGCCGCCTGCGAGTCCTACGATCACAAATATCGCTCCCTACCCTTG ATTCCCCTCGAAGAGTTTCTGGCTCTGCATCCCGAGCACCAGCAGTCCGATGAACACGAATTGATGATCGCTCGC ATCAATCACGAGCATGCGGAACGGGAGAAGCTGGAACAAGCACGACAGGAGCTGCTGAAGCGCAAGCAGGCCTTG ATCGCGGAGAACAACAAGCGCAAGGAGGATTTGGCAAGCTTGGATCAGGATTTAGAGCGGTTTATCGACGCGGCC AAACCGATCCAAAAGATCTTCGAAAAGGAATATTAA
Gene	>Ani_SJS100_1\|g5099.t1 ATGGCCATCCGCGATATCGTCGCCAATCCCTCGCTGCTGCCCGTGCTCGGGCTCAGCGCCGAGACTCGCGATCAA TGCATGAAACTGTTGGCCGTACTCGACCCCACGGCTGATCTGTCCGATGACCCTCAAGAGCGTGCTCTGGCAGCC TCTCGCGAGCAGAAACAATTGTTTGCTCTTCTGGCTCGTCTGCGGGGCCAGAACCGGGATGCGATTATGCGCGTG CGCGAGACCAAGCAGTCCACTGCAGAAGCCCGCCAGGAGATTGACCGTCTCCATCTCCAACTCCAGAACTTGTAT TATGAACAGCGACATTTGACGGGCGAGATCGCCGCCTGCGAGTCCTACGAGTAGGTGGTCCTCGATGACATTGTA TGGTGCGGAACGCTGACCAGGATAGTCACAAATATCGCTCCCTACCCTTGATTCCCCTCGAAGAGTTTCTGGCTC TGCATCCCGAGCACCAGCAGTCCGATGAACACGAATTGATGATCGCTCGCATCAATCACGAGCATGCGGAACGGG AGAAGCTGGAACAAGCACGACAGGAGCTGCTGAAGCGCAAGCAGGCCTTGATCGCGGAGAACAACAAGCGCAAGG AGGATTTGGCAAGCTTGGATCAGGATTTAGAGCGGTTTATCGACGTATGTTGCACTGTGTTCCTTTCTGTGAAGT TTACTAACGGGTGTAGGCGGCCAAACCGATCCAAAAGATCTTCGAAAAGGAATATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail