Protein ID | Ani_SJS100_1|g5098.t1 |
Gene name | |
Location | scaffold_027:303476..305534 |
Strand | - |
Gene length (bp) | 2058 |
Transcript length (bp) | 1764 |
Coding sequence length (bp) | 1764 |
Protein length (aa) | 588 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03006 | HlyIII | Haemolysin-III related | 3.6E-61 | 342 | 564 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0005575 | cellular_component | No |
GO:0110165 | cellular anatomical entity | No |
GO:0031224 | intrinsic component of membrane | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 68 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 36 | 58 | 22 |
2 | 65 | 87 | 22 |
3 | 349 | 371 | 22 |
4 | 384 | 406 | 22 |
5 | 421 | 443 | 22 |
6 | 450 | 472 | 22 |
7 | 482 | 501 | 19 |
8 | 508 | 530 | 22 |
9 | 545 | 567 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5098.t1 MKSKASELPVERPGGNEKGRFSAVTPLSPFSPRLSLTVLAAVGLPLLFFVSPLLLSPLLSSPCIFICFHFLICGI DFYAVGSLSLYAMACSSQSVTIESYPEAAVASAYATPGEDTGLLRDRRRRHSFHTARKLSCDYDADAVFLRVELF LAELERRLHWLEQYRKSHMDQIDASLRRGYATLEAVRDSCSHASGELMGGGKKRAKILVETLEDRYMDALATKET LEQKAQAGVRLMESFLVELESRAHAVRDRGLYGTLDDGWKAMDSKLVHAREVVDEGMERARRAKDALRESIDRAI LLAQEQRLITYADLPHPWRVNPHILQGYRFTHSKVECLTSVFSPSNETFNIWSHLIGLFIVLSVAFYFYPLNPNF HLSSRTDILVAAVFFFAACKCLVCSTLWHTMNSIASQTLMERFACVDYTGISMLVAASIVTTEYTAFYCEPVSRW TYILLTMSLGIGGVILPWHPTFNRADMAWARVAFYVSLALTGFAPLAQLTYTRGLAWCLYFYAPVVKSIMVYFVG ACVYASQVPERWRPGLFDYVGGSHNIWHLAVLGGILFHYCAMQDLFAGAFQRAQGECPNLAK* |
Coding | >Ani_SJS100_1|g5098.t1 ATGAAGTCCAAGGCTAGTGAGCTGCCGGTTGAAAGACCGGGCGGGAATGAAAAAGGCCGTTTCAGCGCAGTGACA CCTCTGTCTCCGTTTTCCCCTCGCCTCTCTCTGACTGTACTGGCTGCTGTTGGATTGCCTCTCCTCTTTTTCGTC TCTCCTTTATTACTCTCTCCTCTCCTCTCCTCTCCTTGCATATTTATTTGTTTTCACTTCTTGATATGTGGAATT GATTTCTACGCTGTGGGTTCTCTGTCATTGTACGCCATGGCCTGCTCATCACAATCTGTCACCATTGAGTCCTAT CCTGAGGCGGCGGTGGCCTCAGCCTATGCCACCCCCGGAGAAGACACCGGCCTCCTGAGAGATCGTCGTCGCAGA CACTCTTTCCACACAGCTCGCAAGTTGTCCTGCGACTACGATGCGGACGCTGTATTCCTACGGGTGGAGCTCTTC CTGGCCGAACTCGAACGACGCCTCCACTGGCTCGAACAATACCGCAAGTCCCACATGGATCAGATCGACGCCAGT CTCCGCCGTGGATACGCCACCCTGGAAGCCGTGCGAGATTCCTGCTCCCATGCCTCCGGCGAGCTGATGGGTGGT GGGAAAAAGCGGGCCAAGATCCTCGTCGAGACGCTGGAGGACCGCTACATGGATGCACTCGCAACAAAGGAGACG CTCGAACAAAAGGCCCAGGCGGGAGTCCGACTGATGGAGTCGTTTCTGGTCGAGCTGGAGTCCCGCGCCCATGCG GTCCGCGACCGGGGGCTCTACGGCACTCTGGACGATGGATGGAAGGCGATGGACTCGAAGCTGGTGCATGCCCGT GAGGTGGTCGACGAGGGTATGGAACGGGCACGACGGGCGAAAGACGCGCTGCGGGAGAGCATCGACCGAGCTATC CTGCTGGCCCAGGAGCAACGGTTGATCACGTATGCGGATCTCCCGCACCCGTGGCGGGTGAACCCGCATATTCTG CAGGGGTATCGGTTCACACACTCCAAGGTGGAATGCTTGACCTCGGTGTTCTCGCCTTCGAATGAGACGTTCAAC ATCTGGTCCCACCTGATTGGGCTTTTCATCGTCCTATCGGTGGCCTTTTACTTTTATCCGCTGAACCCCAACTTC CACCTCAGCTCGCGGACGGACATTCTGGTGGCCGCCGTCTTCTTCTTCGCGGCGTGCAAGTGCCTTGTCTGCAGC ACACTGTGGCACACGATGAACAGCATTGCCAGCCAAACGCTGATGGAGCGGTTTGCCTGTGTGGACTACACGGGC ATCTCGATGCTGGTGGCAGCCTCGATTGTGACGACCGAGTACACGGCTTTCTACTGCGAGCCGGTGTCACGGTGG ACTTACATTTTGCTGACCATGTCGCTCGGTATCGGAGGTGTGATCCTGCCGTGGCACCCAACCTTTAACCGGGCG GATATGGCATGGGCGCGCGTGGCTTTTTACGTGTCGCTAGCGCTGACGGGATTCGCGCCGTTGGCACAGCTGACG TACACGCGTGGACTCGCCTGGTGTTTGTATTTCTACGCACCAGTAGTGAAGAGCATCATGGTGTACTTCGTGGGA GCGTGTGTTTATGCGTCGCAGGTGCCGGAGCGGTGGCGGCCAGGACTGTTCGATTATGTGGGTGGCAGTCACAAC ATCTGGCATCTGGCTGTCTTGGGAGGGATCCTGTTCCACTATTGCGCGATGCAGGATCTGTTCGCGGGAGCATTC CAGCGGGCGCAGGGCGAGTGCCCGAACCTGGCCAAGTAG |
Transcript | >Ani_SJS100_1|g5098.t1 ATGAAGTCCAAGGCTAGTGAGCTGCCGGTTGAAAGACCGGGCGGGAATGAAAAAGGCCGTTTCAGCGCAGTGACA CCTCTGTCTCCGTTTTCCCCTCGCCTCTCTCTGACTGTACTGGCTGCTGTTGGATTGCCTCTCCTCTTTTTCGTC TCTCCTTTATTACTCTCTCCTCTCCTCTCCTCTCCTTGCATATTTATTTGTTTTCACTTCTTGATATGTGGAATT GATTTCTACGCTGTGGGTTCTCTGTCATTGTACGCCATGGCCTGCTCATCACAATCTGTCACCATTGAGTCCTAT CCTGAGGCGGCGGTGGCCTCAGCCTATGCCACCCCCGGAGAAGACACCGGCCTCCTGAGAGATCGTCGTCGCAGA CACTCTTTCCACACAGCTCGCAAGTTGTCCTGCGACTACGATGCGGACGCTGTATTCCTACGGGTGGAGCTCTTC CTGGCCGAACTCGAACGACGCCTCCACTGGCTCGAACAATACCGCAAGTCCCACATGGATCAGATCGACGCCAGT CTCCGCCGTGGATACGCCACCCTGGAAGCCGTGCGAGATTCCTGCTCCCATGCCTCCGGCGAGCTGATGGGTGGT GGGAAAAAGCGGGCCAAGATCCTCGTCGAGACGCTGGAGGACCGCTACATGGATGCACTCGCAACAAAGGAGACG CTCGAACAAAAGGCCCAGGCGGGAGTCCGACTGATGGAGTCGTTTCTGGTCGAGCTGGAGTCCCGCGCCCATGCG GTCCGCGACCGGGGGCTCTACGGCACTCTGGACGATGGATGGAAGGCGATGGACTCGAAGCTGGTGCATGCCCGT GAGGTGGTCGACGAGGGTATGGAACGGGCACGACGGGCGAAAGACGCGCTGCGGGAGAGCATCGACCGAGCTATC CTGCTGGCCCAGGAGCAACGGTTGATCACGTATGCGGATCTCCCGCACCCGTGGCGGGTGAACCCGCATATTCTG CAGGGGTATCGGTTCACACACTCCAAGGTGGAATGCTTGACCTCGGTGTTCTCGCCTTCGAATGAGACGTTCAAC ATCTGGTCCCACCTGATTGGGCTTTTCATCGTCCTATCGGTGGCCTTTTACTTTTATCCGCTGAACCCCAACTTC CACCTCAGCTCGCGGACGGACATTCTGGTGGCCGCCGTCTTCTTCTTCGCGGCGTGCAAGTGCCTTGTCTGCAGC ACACTGTGGCACACGATGAACAGCATTGCCAGCCAAACGCTGATGGAGCGGTTTGCCTGTGTGGACTACACGGGC ATCTCGATGCTGGTGGCAGCCTCGATTGTGACGACCGAGTACACGGCTTTCTACTGCGAGCCGGTGTCACGGTGG ACTTACATTTTGCTGACCATGTCGCTCGGTATCGGAGGTGTGATCCTGCCGTGGCACCCAACCTTTAACCGGGCG GATATGGCATGGGCGCGCGTGGCTTTTTACGTGTCGCTAGCGCTGACGGGATTCGCGCCGTTGGCACAGCTGACG TACACGCGTGGACTCGCCTGGTGTTTGTATTTCTACGCACCAGTAGTGAAGAGCATCATGGTGTACTTCGTGGGA GCGTGTGTTTATGCGTCGCAGGTGCCGGAGCGGTGGCGGCCAGGACTGTTCGATTATGTGGGTGGCAGTCACAAC ATCTGGCATCTGGCTGTCTTGGGAGGGATCCTGTTCCACTATTGCGCGATGCAGGATCTGTTCGCGGGAGCATTC CAGCGGGCGCAGGGCGAGTGCCCGAACCTGGCCAAGTAG |
Gene | >Ani_SJS100_1|g5098.t1 ATGAAGTCCAAGGCTAGTGAGCTGCCGGTTGAAAGACCGGGCGGGAATGAAAAAGGCCGTTTCAGCGCAGTGGTT AGTTAGTGATTCGGAGACGAAGCAGCCGGGAATTAATCTTTGGATCCTCCCCTCCCCACTTGATTTGATTCTCTC CTCCTCTTTCTTGTCCTTCTCCTTCTCCTCTTTTTGTCGACTGACAGACACCTCTGTCTCCGTTTTCCCCTCGCC TCTCTCTGACTGTACTGGCTGCTGTTGGATTGCCTCTCCTCTTTTTCGTCTCTCCTTTATTACTCTCTCCTCTCC TCTCCTCTCCTTGCATATTTATTTGTTTTCACTTCTTGTACGTATTTTGGTACTGGTTTTCTCCGCCTATCCCGG TTCTCCCGATCTTCCCCACCCAAAACAACATCCTTCGCTGTCTGCCCAACCACCACTAACTCCTCTTTCCTTCAG GATATGTGGAATTGATTTCTACGCTGTGGGTTCTCTGTCATTGTACGCCATGGCCTGCTCATCACAATCTGTCAC CATTGAGTCCTATCCTGAGGCGGCGGTGGCCTCAGCCTATGCCACCCCCGGAGAAGACACCGGCCTCCTGAGAGA TCGTCGTCGCAGACACTCTTTCCACACAGCTCGCAAGTTGTCCTGCGACTACGATGCGGACGCTGTATTCCTACG GGTACGCCGCATTCTCGTCTTCACCCCCAATTCTGTCCCTGACTGACCTCTCCGTAGGTGGAGCTCTTCCTGGCC GAACTCGAACGACGCCTCCACTGGCTCGAACAATACCGCAAGTCCCACATGGATCAGATCGACGCCAGTCTCCGC CGTGGATACGCCACCCTGGAAGCCGTGCGAGATTCCTGCTCCCATGCCTCCGGCGAGCTGATGGGTGGTGGGAAA AAGCGGGCCAAGATCCTCGTCGAGACGCTGGAGGACCGCTACATGGATGCACTCGCAACAAAGGAGACGCTCGAA CAAAAGGCCCAGGCGGGAGTCCGACTGATGGAGTCGTTTCTGGTCGAGCTGGAGTCCCGCGCCCATGCGGTCCGC GACCGGGGGCTCTACGGCACTCTGGACGATGGATGGAAGGCGATGGACTCGAAGCTGGTGCATGCCCGTGAGGTG GTCGACGAGGGTATGGAACGGGCACGACGGGCGAAAGACGCGCTGCGGGAGAGCATCGACCGAGCTATCCTGCTG GCCCAGGAGCAACGGTTGATCACGTATGCGGATCTCCCGCACCCGTGGCGGGTGAACCCGCATATTCTGCAGGGG TATCGGTTCACACACTCCAAGGTGGAATGCTTGACCTCGGTGTTCTCGCCTTCGAATGAGACGTTCAACATCTGG TCCCACCTGATTGGGCTTTTCATCGTCCTATCGGTGGCCTTTTACTTTTATCCGCTGAACCCCAACTTCCACCTC AGCTCGCGGACGGACATTCTGGTGGCCGCCGTCTTCTTCTTCGCGGCGTGCAAGTGCCTTGTCTGCAGCACACTG TGGCACACGATGAACAGCATTGCCAGCCAAACGCTGATGGAGCGGTTTGCCTGTGTGGACTACACGGGCATCTCG ATGCTGGTGGCAGCCTCGATTGTGACGACCGAGTACACGGCTTTCTACTGCGAGCCGGTGTCACGGTGGACTTAC ATTTTGCTGACCATGTCGCTCGGTATCGGAGGTGTGATCCTGCCGTGGCACCCAACCTTTAACCGGGCGGATATG GCATGGGCGCGCGTGGCTTTTTACGTGTCGCTAGCGCTGACGGGATTCGCGCCGTTGGCACAGCTGACGTACACG CGTGGACTCGCCTGGTGTTTGTATTTCTACGCACCAGTAGTGAAGAGCATCATGGTGTACTTCGTGGGAGCGTGT GTTTATGCGTCGCAGGTGCCGGAGCGGTGGCGGCCAGGACTGTTCGATTATGTGGGTGGCAGTCACAACATCTGG CATCTGGCTGTCTTGGGAGGGATCCTGTTCCACTATTGCGCGATGCAGGATCTGTTCGCGGGAGCATTCCAGCGG GCGCAGGGCGAGTGCCCGAACCTGGCCAAGTAG |