© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5064.t1 |
| Gene name | |
| Location | scaffold_027:182002..183313 |
| Strand | + |
| Gene length (bp) | 1311 |
| Transcript length (bp) | 897 |
| Coding sequence length (bp) | 897 |
| Protein length (aa) | 299 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12271 | Chs7 | Chitin synthase export chaperone | 2.5E-107 | 5 | 292 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 50 | 72 | 22 |
| 2 | 87 | 109 | 22 |
| 3 | 116 | 138 | 22 |
| 4 | 148 | 170 | 22 |
| 5 | 191 | 211 | 20 |
| 6 | 226 | 248 | 22 |
| 7 | 260 | 282 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5064.t1 MGSTQFGNFNDFCRDSTLPVCNLFVSNNQPPNEAYGGCPLHGIVLSDNRYLSNLGSILLAFISILVSLFLLFRSD RKRAAVGRREMQIFLLAFIVVEICEIFSVGGFPLDAAVRKGFSAAHVAAITATCWILFLNAVVGYQFLDDGTPAS IGLILASALVLFIGTGYIALDTAFDWTGEFATTEANNYRNIALYVLYQLFPLICLVAFYVLEAILVIRILGEVRP MIYLTAAALLFAIGQIFEYVISVHLCHASGSKINGALFETLFTLLAVGTVWSFWSSITEDDWPMPITTGGAYH* |
| Coding | >Ani_SJS100_1|g5064.t1 ATGGGTTCGACACAGTTTGGAAATTTCAACGACTTTTGTCGAGATTCCACACTGCCCGTCTGCAATCTCTTTGTC TCCAACAATCAACCCCCTAATGAAGCATACGGAGGATGCCCGCTTCACGGCATCGTGCTCAGCGATAATCGCTAC CTCAGCAATCTGGGCTCGATCCTTCTCGCGTTCATTTCCATCCTAGTATCGCTGTTCCTGCTGTTCAGGTCGGAT CGCAAACGGGCGGCAGTCGGAAGGAGGGAAATGCAAATATTTTTGCTGGCATTTATCGTTGTCGAAATCTGTGAG ATCTTCTCTGTGGGCGGCTTCCCTCTGGATGCAGCAGTGCGCAAGGGCTTCTCGGCTGCACATGTCGCTGCAATC ACCGCAACGTGCTGGATTCTCTTTCTGAATGCCGTGGTAGGCTATCAATTCCTCGACGACGGTACCCCGGCCTCA ATCGGTCTAATCCTTGCCTCCGCCCTGGTTCTCTTCATCGGTACGGGCTATATTGCCCTGGACACGGCTTTTGAC TGGACGGGTGAATTCGCGACAACCGAGGCAAACAATTATCGCAACATTGCTCTCTATGTGCTGTACCAACTCTTT CCTCTCATCTGCCTCGTCGCGTTTTACGTGTTGGAAGCTATCCTGGTTATTCGGATCTTGGGCGAAGTTCGACCA ATGATCTACTTGACTGCTGCCGCCTTGTTGTTCGCCATCGGACAAATCTTCGAATACGTGATCAGCGTTCACCTC TGCCACGCCTCCGGCAGCAAGATTAACGGCGCATTGTTCGAGACACTTTTCACTCTTTTGGCAGTTGGTACAGTA TGGAGCTTCTGGAGCAGCATCACCGAAGACGATTGGCCTATGCCGATAACAACCGGAGGCGCGTACCATTAA |
| Transcript | >Ani_SJS100_1|g5064.t1 ATGGGTTCGACACAGTTTGGAAATTTCAACGACTTTTGTCGAGATTCCACACTGCCCGTCTGCAATCTCTTTGTC TCCAACAATCAACCCCCTAATGAAGCATACGGAGGATGCCCGCTTCACGGCATCGTGCTCAGCGATAATCGCTAC CTCAGCAATCTGGGCTCGATCCTTCTCGCGTTCATTTCCATCCTAGTATCGCTGTTCCTGCTGTTCAGGTCGGAT CGCAAACGGGCGGCAGTCGGAAGGAGGGAAATGCAAATATTTTTGCTGGCATTTATCGTTGTCGAAATCTGTGAG ATCTTCTCTGTGGGCGGCTTCCCTCTGGATGCAGCAGTGCGCAAGGGCTTCTCGGCTGCACATGTCGCTGCAATC ACCGCAACGTGCTGGATTCTCTTTCTGAATGCCGTGGTAGGCTATCAATTCCTCGACGACGGTACCCCGGCCTCA ATCGGTCTAATCCTTGCCTCCGCCCTGGTTCTCTTCATCGGTACGGGCTATATTGCCCTGGACACGGCTTTTGAC TGGACGGGTGAATTCGCGACAACCGAGGCAAACAATTATCGCAACATTGCTCTCTATGTGCTGTACCAACTCTTT CCTCTCATCTGCCTCGTCGCGTTTTACGTGTTGGAAGCTATCCTGGTTATTCGGATCTTGGGCGAAGTTCGACCA ATGATCTACTTGACTGCTGCCGCCTTGTTGTTCGCCATCGGACAAATCTTCGAATACGTGATCAGCGTTCACCTC TGCCACGCCTCCGGCAGCAAGATTAACGGCGCATTGTTCGAGACACTTTTCACTCTTTTGGCAGTTGGTACAGTA TGGAGCTTCTGGAGCAGCATCACCGAAGACGATTGGCCTATGCCGATAACAACCGGAGGCGCGTACCATTAA |
| Gene | >Ani_SJS100_1|g5064.t1 ATGGGTTCGACACAGTTTGGAAATTTCAACGTGGGTTTGCGATTGATCTATCGTTTGCATCTGCCAGAACCTGGA AGAAGCTGACCGTGAATGATCTGCATGTGCAGGACTTTTGTCGAGATTCCACACTGCCCGTCTGCAATGTACGTC TTCCTCAATTTACTTTATCCCCAATTTCCTTTTTCTGTTTCTGTCATCGGCTGTCAATGCTCAATTTATACATTC CATGTGGCTGACCATGTGCTTCCGATAGCTCTTTGTCTCCAACAATCAACCCCCTAATGAAGCATACGGAGGATG CCCGCTTCACGGCATCGTGCTCAGCGATAATCGCTACCTCAGCAATCTGGGTATGGCACGCCAGACATGCTCATT CTCGACGTCCTAGCGCTAACCTATACAGGCTCGATCCTTCTCGCGTTCATTTCCATCCTAGTATCGCTGTTCCTG CTGTTCAGGTCGGATCGCAAACGGGCGGCAGTCGGAAGGAGGTACGCGACAAACGATTGGATGAGGAAAAAAGGA GGGGAAATGCTGATTGGAGTAGGGAAATGCAAATATTTTTGCTGGCATTTATCGTTGTCGAAATCTGTGAGATCT TCTCTGTGGGCGGCTTCCCTCTGGATGCAGCAGTGCGCAAGGTTAGTCGTGCGACTCCTCACACGGATTGCTGTC TCTAATCAACATGCATAGGGCTTCTCGGCTGCACATGTCGCTGCAATCACCGCAACGTGCTGGATTCTCTTTCTG AATGCCGTGGTAGGCTATCAATTCCTCGACGACGGTACCCCGGCCTCAATCGGTCTAATCCTTGCCTCCGCCCTG GTTCTCTTCATCGGTACGGGCTATATTGCCCTGGACACGGCTTTTGACTGGACGGGTGAATTCGCGACAACCGAG GCAAACAATTATCGCAACATTGCTCTCTATGTGCTGTACCAACTCTTTCCTCTCATCTGCCTCGTCGCGTTTTAC GTGTTGGAAGCTATCCTGGTTATTCGGATCTTGGGCGAAGTTCGACCAATGAGTAAGTTTACAACCTATTTTCGG ATAACGTTGTTGTGTTTCATCCGACTCCCTAACTTGTCTATAGTCTACTTGACTGCTGCCGCCTTGTTGTTCGCC ATCGGACAAATCTTCGAATACGTGATCAGCGTTCACCTCTGCCACGCCTCCGGCAGCAAGATTAACGGCGCATTG TTCGAGACACTTTTCACTCTTTTGGCAGTTGGTACAGTATGGAGCTTCTGGAGCAGCATCACCGAAGACGATTGG CCTATGCCGATAACAACCGGAGGCGCGTACCATTAA |