Protein ID | Ani_SJS100_1|g5061.t1 |
Gene name | |
Location | scaffold_027:172214..174134 |
Strand | - |
Gene length (bp) | 1920 |
Transcript length (bp) | 1920 |
Coding sequence length (bp) | 1920 |
Protein length (aa) | 640 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 1.9E-06 | 99 | 149 |
PF13445 | zf-RING_UBOX | RING-type zinc-finger | 3.5E-06 | 99 | 127 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0043169 | cation binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5061.t1 MRSTTSRKGQTSITHLMNFSLPPRPQYHPPPRNTRRYTSWGPGSGYHAMDKSRYVHANYRFIVTPNRNYHAQAAN ADVHLDWDSVMQVLVSEQTQSASCPICLSTPVAPRMARCGHIFCLPCLIRYMHSTDEEKPVPEKKPRWKKCPICW DSVYISETRPVRWFRGQEGDLPFEGGDVVLRLVKREPGSTLALPRDGAEGIAPDEDVPWYHAAEVADYARIMKGG EDYMKEQYDIEIDELRRQELEDELLFGDDTTWTRKAVAAIADAKSKVEGIGNPPEIVRLPVPSQEPKEPVAAHSP PEEIAAMYASQHAIKSGQSSSAESIPASDTGPGSASTPETSNDVDRTAEALGQVDLNTTSAPKKKKRDPGHGRNN MPSKRGPTTSDHAFFFYQALPQFYLSPLDIRILKAAFGDYSSFPATILPRVERISSGHIVDDELRKRVKYLSHLP QGCEVNFLECDWRDVVVPEVLENFKSETEKRRKRNKEKEVREEKDRIRAEKEEDEKRWAAARRKRPSIGPVDEPP FSDRDFQPLSGSAGEPSGFDIGSSSASPPPSSSPPGSRTVWGTVAAPTLSAPSSSQAPADGWLQGWEEELWAQQE RELLAQSAAEANTPASSSGGKKKKNKKITLMSTNIQRGA* |
Coding | >Ani_SJS100_1|g5061.t1 ATGAGATCCACGACCAGTCGCAAGGGACAGACGTCCATCACTCATCTGATGAACTTCTCCCTTCCCCCTCGTCCT CAGTACCATCCTCCACCCCGTAATACTCGCCGCTATACGTCCTGGGGTCCAGGTTCCGGCTACCATGCCATGGAC AAATCCCGCTACGTTCATGCCAACTATCGCTTTATTGTGACGCCAAATCGCAACTACCATGCACAAGCGGCCAAT GCTGATGTCCATCTTGACTGGGATTCAGTGATGCAGGTCTTGGTATCAGAGCAGACACAGTCAGCTAGCTGCCCC ATCTGTTTGTCCACACCGGTAGCGCCACGCATGGCTCGTTGTGGTCATATATTCTGCCTTCCTTGTTTGATTCGC TACATGCATTCGACTGACGAGGAAAAACCGGTTCCTGAGAAGAAGCCACGATGGAAAAAGTGCCCCATCTGTTGG GACTCTGTGTACATTTCGGAAACTCGGCCTGTGCGATGGTTTCGTGGCCAAGAAGGGGACCTCCCATTCGAGGGG GGTGATGTCGTGCTAAGGCTAGTGAAAAGAGAGCCCGGAAGCACGTTAGCACTCCCACGGGATGGAGCTGAGGGA ATAGCACCAGATGAGGATGTTCCGTGGTATCATGCTGCAGAAGTGGCTGATTACGCGCGCATAATGAAAGGAGGT GAAGATTATATGAAAGAACAATACGACATTGAGATTGATGAGCTCCGCAGGCAGGAGCTTGAGGATGAGCTTTTA TTTGGAGATGATACTACTTGGACACGGAAGGCGGTTGCAGCAATTGCAGATGCCAAATCCAAGGTAGAGGGTATA GGGAACCCACCCGAGATTGTGCGACTGCCCGTCCCAAGCCAAGAGCCAAAGGAACCTGTCGCCGCACACTCACCA CCAGAGGAAATTGCTGCCATGTATGCATCGCAGCATGCAATCAAGTCAGGCCAAAGTTCGTCTGCGGAGTCTATC CCCGCGTCAGATACTGGGCCTGGTTCGGCCTCCACTCCGGAGACGTCCAATGATGTGGATCGTACAGCCGAAGCT TTGGGCCAGGTTGACCTGAATACAACCTCTGCCCCGAAAAAGAAAAAGAGAGATCCTGGACACGGCCGAAATAAT ATGCCCTCAAAGCGAGGTCCTACTACATCTGACCATGCGTTCTTCTTCTACCAAGCTCTACCCCAATTCTACCTT TCGCCCTTGGACATCCGCATCTTGAAAGCTGCATTTGGCGATTACTCTTCATTCCCGGCCACCATTCTCCCTAGG GTTGAGCGTATTTCGAGCGGTCATATTGTGGACGACGAGCTACGCAAACGAGTCAAGTATCTCAGCCACCTGCCG CAAGGTTGTGAGGTGAACTTTCTCGAGTGTGACTGGAGAGACGTAGTTGTGCCGGAGGTGCTAGAAAATTTCAAG TCGGAAACTGAAAAGAGACGGAAGCGCAATAAGGAGAAAGAGGTGCGAGAAGAGAAGGATCGCATCCGAGCGGAG AAAGAAGAGGATGAAAAGCGCTGGGCAGCGGCGCGCCGGAAGAGGCCTAGCATTGGCCCCGTCGATGAACCTCCC TTCTCCGACCGCGATTTTCAGCCGTTATCGGGCTCTGCTGGCGAGCCTTCTGGCTTCGATATAGGCTCTTCCTCT GCATCCCCTCCGCCCTCCTCGAGTCCCCCCGGATCTCGTACGGTGTGGGGAACAGTTGCCGCTCCGACACTTTCG GCTCCGTCGAGCTCACAAGCCCCTGCCGATGGTTGGCTGCAGGGCTGGGAGGAGGAGCTGTGGGCCCAGCAAGAA AGGGAGCTCTTGGCTCAATCTGCTGCTGAGGCGAACACTCCAGCTTCTTCCTCTGGCGGGAAAAAGAAGAAGAAT AAGAAAATTACACTCATGTCGACCAATATCCAAAGAGGGGCATAG |
Transcript | >Ani_SJS100_1|g5061.t1 ATGAGATCCACGACCAGTCGCAAGGGACAGACGTCCATCACTCATCTGATGAACTTCTCCCTTCCCCCTCGTCCT CAGTACCATCCTCCACCCCGTAATACTCGCCGCTATACGTCCTGGGGTCCAGGTTCCGGCTACCATGCCATGGAC AAATCCCGCTACGTTCATGCCAACTATCGCTTTATTGTGACGCCAAATCGCAACTACCATGCACAAGCGGCCAAT GCTGATGTCCATCTTGACTGGGATTCAGTGATGCAGGTCTTGGTATCAGAGCAGACACAGTCAGCTAGCTGCCCC ATCTGTTTGTCCACACCGGTAGCGCCACGCATGGCTCGTTGTGGTCATATATTCTGCCTTCCTTGTTTGATTCGC TACATGCATTCGACTGACGAGGAAAAACCGGTTCCTGAGAAGAAGCCACGATGGAAAAAGTGCCCCATCTGTTGG GACTCTGTGTACATTTCGGAAACTCGGCCTGTGCGATGGTTTCGTGGCCAAGAAGGGGACCTCCCATTCGAGGGG GGTGATGTCGTGCTAAGGCTAGTGAAAAGAGAGCCCGGAAGCACGTTAGCACTCCCACGGGATGGAGCTGAGGGA ATAGCACCAGATGAGGATGTTCCGTGGTATCATGCTGCAGAAGTGGCTGATTACGCGCGCATAATGAAAGGAGGT GAAGATTATATGAAAGAACAATACGACATTGAGATTGATGAGCTCCGCAGGCAGGAGCTTGAGGATGAGCTTTTA TTTGGAGATGATACTACTTGGACACGGAAGGCGGTTGCAGCAATTGCAGATGCCAAATCCAAGGTAGAGGGTATA GGGAACCCACCCGAGATTGTGCGACTGCCCGTCCCAAGCCAAGAGCCAAAGGAACCTGTCGCCGCACACTCACCA CCAGAGGAAATTGCTGCCATGTATGCATCGCAGCATGCAATCAAGTCAGGCCAAAGTTCGTCTGCGGAGTCTATC CCCGCGTCAGATACTGGGCCTGGTTCGGCCTCCACTCCGGAGACGTCCAATGATGTGGATCGTACAGCCGAAGCT TTGGGCCAGGTTGACCTGAATACAACCTCTGCCCCGAAAAAGAAAAAGAGAGATCCTGGACACGGCCGAAATAAT ATGCCCTCAAAGCGAGGTCCTACTACATCTGACCATGCGTTCTTCTTCTACCAAGCTCTACCCCAATTCTACCTT TCGCCCTTGGACATCCGCATCTTGAAAGCTGCATTTGGCGATTACTCTTCATTCCCGGCCACCATTCTCCCTAGG GTTGAGCGTATTTCGAGCGGTCATATTGTGGACGACGAGCTACGCAAACGAGTCAAGTATCTCAGCCACCTGCCG CAAGGTTGTGAGGTGAACTTTCTCGAGTGTGACTGGAGAGACGTAGTTGTGCCGGAGGTGCTAGAAAATTTCAAG TCGGAAACTGAAAAGAGACGGAAGCGCAATAAGGAGAAAGAGGTGCGAGAAGAGAAGGATCGCATCCGAGCGGAG AAAGAAGAGGATGAAAAGCGCTGGGCAGCGGCGCGCCGGAAGAGGCCTAGCATTGGCCCCGTCGATGAACCTCCC TTCTCCGACCGCGATTTTCAGCCGTTATCGGGCTCTGCTGGCGAGCCTTCTGGCTTCGATATAGGCTCTTCCTCT GCATCCCCTCCGCCCTCCTCGAGTCCCCCCGGATCTCGTACGGTGTGGGGAACAGTTGCCGCTCCGACACTTTCG GCTCCGTCGAGCTCACAAGCCCCTGCCGATGGTTGGCTGCAGGGCTGGGAGGAGGAGCTGTGGGCCCAGCAAGAA AGGGAGCTCTTGGCTCAATCTGCTGCTGAGGCGAACACTCCAGCTTCTTCCTCTGGCGGGAAAAAGAAGAAGAAT AAGAAAATTACACTCATGTCGACCAATATCCAAAGAGGGGCATAG |
Gene | >Ani_SJS100_1|g5061.t1 ATGAGATCCACGACCAGTCGCAAGGGACAGACGTCCATCACTCATCTGATGAACTTCTCCCTTCCCCCTCGTCCT CAGTACCATCCTCCACCCCGTAATACTCGCCGCTATACGTCCTGGGGTCCAGGTTCCGGCTACCATGCCATGGAC AAATCCCGCTACGTTCATGCCAACTATCGCTTTATTGTGACGCCAAATCGCAACTACCATGCACAAGCGGCCAAT GCTGATGTCCATCTTGACTGGGATTCAGTGATGCAGGTCTTGGTATCAGAGCAGACACAGTCAGCTAGCTGCCCC ATCTGTTTGTCCACACCGGTAGCGCCACGCATGGCTCGTTGTGGTCATATATTCTGCCTTCCTTGTTTGATTCGC TACATGCATTCGACTGACGAGGAAAAACCGGTTCCTGAGAAGAAGCCACGATGGAAAAAGTGCCCCATCTGTTGG GACTCTGTGTACATTTCGGAAACTCGGCCTGTGCGATGGTTTCGTGGCCAAGAAGGGGACCTCCCATTCGAGGGG GGTGATGTCGTGCTAAGGCTAGTGAAAAGAGAGCCCGGAAGCACGTTAGCACTCCCACGGGATGGAGCTGAGGGA ATAGCACCAGATGAGGATGTTCCGTGGTATCATGCTGCAGAAGTGGCTGATTACGCGCGCATAATGAAAGGAGGT GAAGATTATATGAAAGAACAATACGACATTGAGATTGATGAGCTCCGCAGGCAGGAGCTTGAGGATGAGCTTTTA TTTGGAGATGATACTACTTGGACACGGAAGGCGGTTGCAGCAATTGCAGATGCCAAATCCAAGGTAGAGGGTATA GGGAACCCACCCGAGATTGTGCGACTGCCCGTCCCAAGCCAAGAGCCAAAGGAACCTGTCGCCGCACACTCACCA CCAGAGGAAATTGCTGCCATGTATGCATCGCAGCATGCAATCAAGTCAGGCCAAAGTTCGTCTGCGGAGTCTATC CCCGCGTCAGATACTGGGCCTGGTTCGGCCTCCACTCCGGAGACGTCCAATGATGTGGATCGTACAGCCGAAGCT TTGGGCCAGGTTGACCTGAATACAACCTCTGCCCCGAAAAAGAAAAAGAGAGATCCTGGACACGGCCGAAATAAT ATGCCCTCAAAGCGAGGTCCTACTACATCTGACCATGCGTTCTTCTTCTACCAAGCTCTACCCCAATTCTACCTT TCGCCCTTGGACATCCGCATCTTGAAAGCTGCATTTGGCGATTACTCTTCATTCCCGGCCACCATTCTCCCTAGG GTTGAGCGTATTTCGAGCGGTCATATTGTGGACGACGAGCTACGCAAACGAGTCAAGTATCTCAGCCACCTGCCG CAAGGTTGTGAGGTGAACTTTCTCGAGTGTGACTGGAGAGACGTAGTTGTGCCGGAGGTGCTAGAAAATTTCAAG TCGGAAACTGAAAAGAGACGGAAGCGCAATAAGGAGAAAGAGGTGCGAGAAGAGAAGGATCGCATCCGAGCGGAG AAAGAAGAGGATGAAAAGCGCTGGGCAGCGGCGCGCCGGAAGAGGCCTAGCATTGGCCCCGTCGATGAACCTCCC TTCTCCGACCGCGATTTTCAGCCGTTATCGGGCTCTGCTGGCGAGCCTTCTGGCTTCGATATAGGCTCTTCCTCT GCATCCCCTCCGCCCTCCTCGAGTCCCCCCGGATCTCGTACGGTGTGGGGAACAGTTGCCGCTCCGACACTTTCG GCTCCGTCGAGCTCACAAGCCCCTGCCGATGGTTGGCTGCAGGGCTGGGAGGAGGAGCTGTGGGCCCAGCAAGAA AGGGAGCTCTTGGCTCAATCTGCTGCTGAGGCGAACACTCCAGCTTCTTCCTCTGGCGGGAAAAAGAAGAAGAAT AAGAAAATTACACTCATGTCGACCAATATCCAAAGAGGGGCATAG |