Protein ID | Ani_SJS100_1|g5059.t1 |
Gene name | |
Location | scaffold_027:164709..166661 |
Strand | + |
Gene length (bp) | 1952 |
Transcript length (bp) | 1680 |
Coding sequence length (bp) | 1680 |
Protein length (aa) | 560 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00999 | Na_H_Exchanger | Sodium/hydrogen exchanger family | 1.8E-47 | 16 | 436 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0015299 | solute:proton antiporter activity | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0006812 | cation transport | Yes |
GO:0003674 | molecular_function | No |
GO:0006810 | transport | No |
GO:0015298 | solute:cation antiporter activity | No |
GO:0009987 | cellular process | No |
GO:0110165 | cellular anatomical entity | No |
GO:0015297 | antiporter activity | No |
GO:0051179 | localization | No |
GO:0051234 | establishment of localization | No |
GO:0008150 | biological_process | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0022804 | active transmembrane transporter activity | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0005575 | cellular_component | No |
GO:0006811 | ion transport | No |
GO:0005215 | transporter activity | No |
GO:0015291 | secondary active transmembrane transporter activity | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
2 | 34 | 56 | 22 |
3 | 105 | 127 | 22 |
4 | 212 | 234 | 22 |
5 | 255 | 277 | 22 |
6 | 308 | 330 | 22 |
7 | 337 | 359 | 22 |
8 | 369 | 391 | 22 |
9 | 416 | 438 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 5351 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5059.t1 MPTLSLINFNIVCATLGGFISVFGLVSYLFKERFYLSEALISLLAGVIFSPHAANFIRPQEYALGSEQNLEEITL YFTRLVLGVQLVLAGVQLPKRYLQIEWKSLSLLLGPGMAAMWMCSSLVIWAMVPNFPFLHALVVGACITPTDPVL SNSIVKGKFADKNVPRPLQRIIVAESGANDGLGYPFLYFGLYLLKYIGKGGEGYSGGAGKAIGLWFYETWVYTVI LSVVYGIVVGWLSRKLLHWAEEKHYVDRESFLVFAIALSLFIIGTCGLIGTDDLLACFVAGNVFTQDDWFRLETM DDSLQPTIDMLLNLAVFMWFGAVCPWSSFLNNSVIPIYRLIFLGILILLVRRMPIIFAMHKLIHQIEHFYQAAFV GFFGPIGVGAVFYLSVSREFLNQITVEGQVREDAAKVSEAVNVVVWFLVICSIIVHGLCIPLAKAGYHLPRTISQ ALSTSTIAEPDPVPIANVQHTHSTATRSAGPTNNRNRKRGHAGREPPDPAVFQIGRSVIRTTSSQEQVQVGAATA DEPARPVNLVVRENEQDSAQESSNSPTPPFEQHV* |
Coding | >Ani_SJS100_1|g5059.t1 ATGCCTACCCTATCGTTGATCAACTTCAACATCGTCTGTGCGACGCTGGGAGGATTTATATCCGTCTTCGGATTG GTGTCCTACCTGTTCAAGGAGAGATTCTATCTTTCTGAAGCATTGATTTCATTGCTAGCTGGAGTGATCTTCTCC CCCCATGCAGCCAACTTTATAAGACCCCAGGAGTATGCACTTGGTTCCGAGCAGAATCTAGAAGAGATCACCCTG TACTTCACCCGTCTCGTCCTTGGGGTCCAGCTGGTCCTTGCCGGGGTGCAGCTCCCCAAACGGTACTTGCAGATA GAATGGAAGAGCCTGTCGCTCCTTTTGGGACCTGGGATGGCTGCCATGTGGATGTGTAGCAGTCTGGTCATTTGG GCCATGGTGCCGAACTTTCCCTTTCTCCATGCTCTCGTCGTGGGTGCGTGCATCACTCCCACCGACCCCGTGCTT TCCAATTCCATCGTAAAGGGCAAATTTGCAGACAAGAATGTGCCTCGTCCTTTGCAGCGCATTATCGTGGCCGAG TCAGGTGCCAACGATGGTCTTGGCTATCCTTTCCTCTATTTTGGATTGTATCTTCTCAAGTACATTGGCAAGGGC GGCGAGGGGTACAGTGGAGGCGCTGGGAAAGCCATAGGCTTGTGGTTCTATGAGACTTGGGTCTATACTGTGATC CTGAGTGTCGTGTATGGGATCGTAGTCGGGTGGCTCTCCCGTAAGTTGCTTCACTGGGCAGAGGAGAAGCATTAC GTGGATCGGGAAAGCTTTCTTGTATTTGCTATCGCTCTTTCACTGTTTATTATTGGTACATGTGGCTTGATAGGG ACAGATGATCTCCTGGCCTGCTTTGTTGCCGGCAATGTGTTTACGCAGGATGACTGGTTTCGCCTAGAAACAATG GATGATTCTTTGCAGCCAACCATCGATATGTTGCTAAACTTGGCGGTCTTCATGTGGTTCGGTGCTGTCTGCCCG TGGTCGTCGTTCCTGAACAACAGCGTGATCCCCATCTATCGCTTGATATTCTTAGGAATCCTAATCCTGCTAGTC CGACGCATGCCTATTATTTTTGCCATGCACAAGCTCATCCACCAAATTGAGCACTTCTATCAGGCAGCATTTGTT GGATTCTTTGGACCTATCGGAGTCGGGGCTGTCTTCTACCTGTCGGTCAGTCGGGAATTCCTGAACCAGATCACC GTCGAAGGTCAAGTCCGTGAAGATGCTGCGAAGGTTTCCGAGGCTGTCAATGTCGTGGTTTGGTTCCTGGTCATT TGCAGCATAATCGTCCATGGACTCTGCATCCCACTAGCAAAAGCCGGCTACCATCTCCCACGGACAATCTCCCAA GCACTCAGCACCAGCACCATTGCTGAACCCGACCCCGTGCCGATCGCCAATGTGCAGCACACGCACAGCACTGCG ACACGCAGCGCAGGGCCCACGAACAACCGAAACCGGAAGCGCGGTCATGCAGGACGGGAACCGCCCGACCCAGCT GTCTTCCAGATCGGTCGGTCTGTTATTCGGACCACCTCTTCGCAGGAGCAAGTCCAGGTTGGAGCAGCAACAGCG GATGAACCTGCTCGACCCGTCAACCTGGTTGTGCGAGAGAACGAGCAGGATAGTGCACAGGAGAGTAGCAACAGT CCGACCCCTCCATTCGAACAACATGTCTAG |
Transcript | >Ani_SJS100_1|g5059.t1 ATGCCTACCCTATCGTTGATCAACTTCAACATCGTCTGTGCGACGCTGGGAGGATTTATATCCGTCTTCGGATTG GTGTCCTACCTGTTCAAGGAGAGATTCTATCTTTCTGAAGCATTGATTTCATTGCTAGCTGGAGTGATCTTCTCC CCCCATGCAGCCAACTTTATAAGACCCCAGGAGTATGCACTTGGTTCCGAGCAGAATCTAGAAGAGATCACCCTG TACTTCACCCGTCTCGTCCTTGGGGTCCAGCTGGTCCTTGCCGGGGTGCAGCTCCCCAAACGGTACTTGCAGATA GAATGGAAGAGCCTGTCGCTCCTTTTGGGACCTGGGATGGCTGCCATGTGGATGTGTAGCAGTCTGGTCATTTGG GCCATGGTGCCGAACTTTCCCTTTCTCCATGCTCTCGTCGTGGGTGCGTGCATCACTCCCACCGACCCCGTGCTT TCCAATTCCATCGTAAAGGGCAAATTTGCAGACAAGAATGTGCCTCGTCCTTTGCAGCGCATTATCGTGGCCGAG TCAGGTGCCAACGATGGTCTTGGCTATCCTTTCCTCTATTTTGGATTGTATCTTCTCAAGTACATTGGCAAGGGC GGCGAGGGGTACAGTGGAGGCGCTGGGAAAGCCATAGGCTTGTGGTTCTATGAGACTTGGGTCTATACTGTGATC CTGAGTGTCGTGTATGGGATCGTAGTCGGGTGGCTCTCCCGTAAGTTGCTTCACTGGGCAGAGGAGAAGCATTAC GTGGATCGGGAAAGCTTTCTTGTATTTGCTATCGCTCTTTCACTGTTTATTATTGGTACATGTGGCTTGATAGGG ACAGATGATCTCCTGGCCTGCTTTGTTGCCGGCAATGTGTTTACGCAGGATGACTGGTTTCGCCTAGAAACAATG GATGATTCTTTGCAGCCAACCATCGATATGTTGCTAAACTTGGCGGTCTTCATGTGGTTCGGTGCTGTCTGCCCG TGGTCGTCGTTCCTGAACAACAGCGTGATCCCCATCTATCGCTTGATATTCTTAGGAATCCTAATCCTGCTAGTC CGACGCATGCCTATTATTTTTGCCATGCACAAGCTCATCCACCAAATTGAGCACTTCTATCAGGCAGCATTTGTT GGATTCTTTGGACCTATCGGAGTCGGGGCTGTCTTCTACCTGTCGGTCAGTCGGGAATTCCTGAACCAGATCACC GTCGAAGGTCAAGTCCGTGAAGATGCTGCGAAGGTTTCCGAGGCTGTCAATGTCGTGGTTTGGTTCCTGGTCATT TGCAGCATAATCGTCCATGGACTCTGCATCCCACTAGCAAAAGCCGGCTACCATCTCCCACGGACAATCTCCCAA GCACTCAGCACCAGCACCATTGCTGAACCCGACCCCGTGCCGATCGCCAATGTGCAGCACACGCACAGCACTGCG ACACGCAGCGCAGGGCCCACGAACAACCGAAACCGGAAGCGCGGTCATGCAGGACGGGAACCGCCCGACCCAGCT GTCTTCCAGATCGGTCGGTCTGTTATTCGGACCACCTCTTCGCAGGAGCAAGTCCAGGTTGGAGCAGCAACAGCG GATGAACCTGCTCGACCCGTCAACCTGGTTGTGCGAGAGAACGAGCAGGATAGTGCACAGGAGAGTAGCAACAGT CCGACCCCTCCATTCGAACAACATGTCTAG |
Gene | >Ani_SJS100_1|g5059.t1 ATGCCTACCCTATCGTTGATCAACTTCAACATCGTCTGTGCGACGCTGGGAGGATTTATATCCGTCTTCGGATTG GTGTCCTACCTGTTCAAGGAGAGATTCTATCTTTCTGAAGCATGTCCGTCCTGCCTTTTTCAACCTTCCACCCGC TACTCCCGAACTCTCCTCGGCAATGCGTGTTGTCGTTGATTGGACGGTGGATGACTGACGTTGTACAGTGATTTC ATTGCTAGCTGGAGTGATCTTCTCCCCCCATGCAGCCAACTTTATAAGACCCCAGGAGTATGCACTTGGTTCCGA GCAGAATCTAGAAGAGATCACCCTGTACTTCACCCGTCTCGTCCTTGGGGTCCAGCTGGTCCTTGCCGGGGTGCA GCTCCCCAAACGGTACTTGCAGATAGAATGGAAGAGCCTGTCGCTCCTTTTGGGACCTGGGATGGCTGCCATGTG GATGTGTAGCAGTCTGGTCATTTGGGCCATGGTGCCGAACTTTCCCTTTCTCCATGCTCTCGTCGTGGGTGCGTG CATCACTCCCACCGACCCCGTGCTTTCCAATTCCATCGTAAAGGGCAAATTTGCAGACAAGAATGTGCCTCGTCC TTTGCAGCGCATTATCGTGGCCGAGTCAGGTGCCAACGATGGTCTTGGCTATCCTTTCCTCTATTTTGGATTGTA TCTTCTCAAGTACATTGGCAAGGGCGGCGAGGGGTACAGTGGAGGCGCTGGGAAAGCCATAGGCTTGTGGTTCTA TGAGACTTGGGTCTATACTGTGATCCTGAGTGTCGTGTATGGGATCGTAGTCGGGTGGCTCTCCCGTAAGTTGCT TCACTGGGCAGAGGAGAAGCATTACGTGGATCGGGAAAGCTTTCTTGTATTTGCTATCGCTCTTTCAGTAAGTTG AATCTTGGTTAGGTCATCACACGTTACTAACACCGAATGCAGCTGTTTATTATTGGTACATGTGGCTTGATAGGG ACAGATGATCTCCTGGCCTGCTTTGTTGCCGGCAATGTGTTTACGCAGGAGTAAGACGTCATGTCCACTTGCTTT GGTTCAATTGCTGACGAAGGTAGTGACTGGTTTCGCCTAGAAACAATGGATGATTCTTTGCAGCCAACCATCGAT ATGTTGCTAAACTTGGCGGTCTTCATGTGGTTCGGTGCTGTCTGCCCGTGGTCGTCGTTCCTGAACAACAGCGTG ATCCCCATCTATCGCTTGATATTCTTAGGAATCCTAATCCTGCTAGTCCGACGCATGCCTATTATTTTTGCCATG CACAAGCTCATCCACCAAATTGAGCACTTCTATCAGGCAGCATTTGTTGGATTCTTTGGACCTATCGGAGTCGGG GCTGTCTTCTACCTGTCGGTCAGTCGGGAATTCCTGAACCAGATCACCGTCGAAGGTCAAGTCCGTGAAGATGCT GCGAAGGTTTCCGAGGCTGTCAATGTCGTGGTTTGGTTCCTGGTCATTTGCAGCATAGTAAGTCCACACACTATC CGGCCAATATCTAGATCTTATAGATCTTGAAACATTTCTTCTGACTTTCTCGGCAGATCGTCCATGGACTCTGCA TCCCACTAGCAAAAGCCGGCTACCATCTCCCACGGACAATCTCCCAAGCACTCAGCACCAGCACCATTGCTGAAC CCGACCCCGTGCCGATCGCCAATGTGCAGCACACGCACAGCACTGCGACACGCAGCGCAGGGCCCACGAACAACC GAAACCGGAAGCGCGGTCATGCAGGACGGGAACCGCCCGACCCAGCTGTCTTCCAGATCGGTCGGTCTGTTATTC GGACCACCTCTTCGCAGGAGCAAGTCCAGGTTGGAGCAGCAACAGCGGATGAACCTGCTCGACCCGTCAACCTGG TTGTGCGAGAGAACGAGCAGGATAGTGCACAGGAGAGTAGCAACAGTCCGACCCCTCCATTCGAACAACATGTCT AG |