Protein ID | Ani_SJS100_1|g5049.t1 |
Gene name | |
Location | scaffold_027:137266..138638 |
Strand | - |
Gene length (bp) | 1372 |
Transcript length (bp) | 1164 |
Coding sequence length (bp) | 1164 |
Protein length (aa) | 388 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10277 | Frag1 | Frag1/DRAM/Sfk1 family | 2.4E-17 | 29 | 309 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 29 | 51 | 22 |
2 | 81 | 103 | 22 |
3 | 172 | 194 | 22 |
4 | 204 | 226 | 22 |
5 | 258 | 280 | 22 |
6 | 290 | 312 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 5340 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5049.t1 MIISFLLRCHDSTWAFLHAVILNIPPSRLYIFPTLAGTVWFLTLASLLLTWLARGMPVYPGQSNPHVAFISDIAS FELKPLFLIGASMTAVGFVFTVAAVHVMRYEPGFALVKCPVISEDTANNDQESNASYNRTSENNHRNTQNHITGH GHDEEEEEGEEEDQETTRTLKVISLLSILAAGTASTALILLGVMDTFRYKFAHHIFLRICFGCLAIQSAGTAIVY STEVLSFVSYLYHWGVWGNDWGRKRSTRVRIFASLSTILILIQLFLGVAFISLTIPEDVNDYRTAGILEWIIAFL GTIYLWLFCGFFDRTTFEGYVPSILYNTAPHGKFLDRPAVAGVGVAEAEAEAESSYSAAGNTLDVDPERAPLLPQ SQAQGGFGTRYT* |
Coding | >Ani_SJS100_1|g5049.t1 ATGATCATTTCGTTCCTTCTCCGCTGCCATGATTCCACCTGGGCCTTTCTCCATGCCGTTATCCTCAATATTCCT CCATCCCGACTGTATATCTTCCCTACCTTGGCTGGTACAGTCTGGTTCCTGACTCTGGCGTCCCTGCTTCTGACA TGGTTGGCTCGTGGAATGCCCGTCTATCCGGGTCAAAGTAATCCACATGTCGCCTTCATCTCCGACATTGCCTCC TTCGAACTAAAACCCCTCTTCCTCATAGGTGCTTCCATGACCGCCGTGGGGTTCGTTTTCACGGTAGCTGCTGTG CACGTCATGCGCTACGAGCCCGGTTTCGCCTTAGTTAAATGTCCAGTTATCTCCGAAGACACTGCCAACAATGAT CAGGAATCCAATGCGTCCTACAACAGAACTAGCGAGAACAATCACCGAAATACCCAGAATCACATAACCGGACAT GGACATGATGAGGAAGAGGAAGAAGGGGAAGAAGAAGACCAAGAAACAACCCGCACCCTCAAAGTCATATCGTTA CTATCAATCCTCGCAGCCGGAACGGCCAGTACAGCGCTCATCCTCCTCGGAGTTATGGATACATTCCGCTACAAA TTCGCCCATCATATCTTCCTTCGCATCTGCTTCGGATGCTTGGCGATACAGTCAGCCGGTACCGCGATTGTCTAT TCAACTGAGGTCCTGAGTTTCGTGTCGTATTTATACCACTGGGGGGTATGGGGCAATGATTGGGGAAGAAAGAGG AGTACACGAGTTAGGATATTTGCATCCCTCTCCACCATCCTCATCTTAATACAGCTCTTCCTCGGCGTGGCCTTC ATCTCTCTCACCATTCCCGAAGACGTAAACGATTACAGAACAGCTGGTATCCTCGAGTGGATCATTGCATTCCTA GGGACGATCTATCTATGGCTCTTCTGTGGGTTCTTTGATCGAACCACCTTCGAAGGCTACGTCCCCAGCATTTTA TACAATACAGCCCCGCATGGCAAATTCCTCGACCGTCCCGCAGTAGCAGGGGTAGGAGTAGCTGAAGCTGAAGCT GAAGCCGAGTCTTCGTACAGCGCTGCTGGTAATACCCTGGATGTGGATCCTGAGCGGGCGCCGTTGCTTCCTCAG TCTCAAGCTCAGGGTGGGTTTGGGACGAGGTATACGTAG |
Transcript | >Ani_SJS100_1|g5049.t1 ATGATCATTTCGTTCCTTCTCCGCTGCCATGATTCCACCTGGGCCTTTCTCCATGCCGTTATCCTCAATATTCCT CCATCCCGACTGTATATCTTCCCTACCTTGGCTGGTACAGTCTGGTTCCTGACTCTGGCGTCCCTGCTTCTGACA TGGTTGGCTCGTGGAATGCCCGTCTATCCGGGTCAAAGTAATCCACATGTCGCCTTCATCTCCGACATTGCCTCC TTCGAACTAAAACCCCTCTTCCTCATAGGTGCTTCCATGACCGCCGTGGGGTTCGTTTTCACGGTAGCTGCTGTG CACGTCATGCGCTACGAGCCCGGTTTCGCCTTAGTTAAATGTCCAGTTATCTCCGAAGACACTGCCAACAATGAT CAGGAATCCAATGCGTCCTACAACAGAACTAGCGAGAACAATCACCGAAATACCCAGAATCACATAACCGGACAT GGACATGATGAGGAAGAGGAAGAAGGGGAAGAAGAAGACCAAGAAACAACCCGCACCCTCAAAGTCATATCGTTA CTATCAATCCTCGCAGCCGGAACGGCCAGTACAGCGCTCATCCTCCTCGGAGTTATGGATACATTCCGCTACAAA TTCGCCCATCATATCTTCCTTCGCATCTGCTTCGGATGCTTGGCGATACAGTCAGCCGGTACCGCGATTGTCTAT TCAACTGAGGTCCTGAGTTTCGTGTCGTATTTATACCACTGGGGGGTATGGGGCAATGATTGGGGAAGAAAGAGG AGTACACGAGTTAGGATATTTGCATCCCTCTCCACCATCCTCATCTTAATACAGCTCTTCCTCGGCGTGGCCTTC ATCTCTCTCACCATTCCCGAAGACGTAAACGATTACAGAACAGCTGGTATCCTCGAGTGGATCATTGCATTCCTA GGGACGATCTATCTATGGCTCTTCTGTGGGTTCTTTGATCGAACCACCTTCGAAGGCTACGTCCCCAGCATTTTA TACAATACAGCCCCGCATGGCAAATTCCTCGACCGTCCCGCAGTAGCAGGGGTAGGAGTAGCTGAAGCTGAAGCT GAAGCCGAGTCTTCGTACAGCGCTGCTGGTAATACCCTGGATGTGGATCCTGAGCGGGCGCCGTTGCTTCCTCAG TCTCAAGCTCAGGGTGGGTTTGGGACGAGGTATACGTAG |
Gene | >Ani_SJS100_1|g5049.t1 ATGATCATTTCGTTCCTTCTCCGCTGCCATGATTCCACCTGGGCCTTTCTCCATGCCGTTATCCTCAATATTCCT CCATCCCGACTGTATATCTTCCCTACCTTGGCTGGTACAGTCTGGTTCCTGACTCTGGCGTCCCTGCTTCTGACA TGGTTGGCTCGTGGAATGCCCGTCTATCCGGGTCAAAGTAATCCACATGTCGCGTGGGTGTTTCTTCCATCTCAA TTACACATTACAGTTTAGATGGTTATTGATCTCGAGGATAGCTTCATCTCCGACATTGCCTCCTTCGAACTAAAA CCCCTCTTCCTCATAGGTGCTTCCATGACCGCCGTGGGGTTCGTTTTCACGGTAGCTGCTGTGCACGTCATGCGC TACGAGCCCGGTTTCGCCTTAGTTAAATGTCCAGTTATCTCCGAAGACACTGCCAACAATGATCAGGAATCCAAT GCGTCCTACAACAGAACTAGCGAGAACAATCACCGAAATACCCAGAATCACATAACCGGACATGGACATGATGAG GAAGAGGAAGAAGGGGAAGAAGAAGACCAAGAAACAACCCGCACCCTCAAAGTCATATCGTTACTATCAATCCTC GCAGCCGGAACGGCCAGTACAGCGCTCATCCTCCTCGGAGTTATGGATACATTCCGCTACAAATTCGCCCATCAT ATCTTCCTTCGCATCTGCTTCGGATGCTTGGCGATACAGTCAGCCGGTACCGCGATTGTCTATTCAACTGAGGTC CTGAGTTTCGTGTCGTATTTATACCACTGGGGGGTATGGGGCAATGATTGGGGAAGAAAGAGGAGTACACGAGTT AGGATATTGTATGTGCACCTTCCCTCTATTAAATCACCTTACAACCTTCTAAACATTGTTGGAAAACGGACAGTG CATCCCTCTCCACCATCCTCATCTTAATACAGCTCTTCCTCGGCGTGGCCTTCATCTCTCTCACCATTCCCGAAG ACGTAAACGATTACAGAACAGCTGGTATCCTCGAGTGGATCATTGCATTCCTAGGGACGATCTATCTATGGCTCT TCTGTGGGTTCTTTGATCGGTACGCTCACGCCTCCTTGCACAAGTCTATGAGCATCTTATCATCATTCCTTCATT GTGATGATTGCTGACCGCAGGCAGAACCACCTTCGAAGGCTACGTCCCCAGCATTTTATACAATACAGCCCCGCA TGGCAAATTCCTCGACCGTCCCGCAGTAGCAGGGGTAGGAGTAGCTGAAGCTGAAGCTGAAGCCGAGTCTTCGTA CAGCGCTGCTGGTAATACCCTGGATGTGGATCCTGAGCGGGCGCCGTTGCTTCCTCAGTCTCAAGCTCAGGGTGG GTTTGGGACGAGGTATACGTAG |