Protein ID | Ani_SJS100_1|g5047.t1 |
Gene name | |
Location | scaffold_027:132276..133661 |
Strand | - |
Gene length (bp) | 1385 |
Transcript length (bp) | 1317 |
Coding sequence length (bp) | 1317 |
Protein length (aa) | 439 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00293 | NUDIX | NUDIX domain | 5.8E-11 | 79 | 196 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 34 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 409 | 431 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5047.t1 MSSSLAPSLHDVLSDLHHRPYPHVPNPPSCKKRASVALILRVRPTYHHWPNSSSLSASDVSASVPQRLETFFAQD WVQNGEPEALFIKRASRVGDRWTGHVALPGGKRDPEDVDDKAAAIREAVEEIGLDLTTSECIHVGNLPERVVTSS WGTVPLMVLCPYVFLLTSSDSPTLRLQPTEVASTHWVPLRALLSSSLRTVEHVDMTQRLANMGGLLARLAYRSMM GYMQFSAIRLAPTESLQCNSTPGYIPEGNQPSTSLVQRWKSWCLGSQTHSGHQDQPLLLWGLTLGIMADFLDMLP PHTAVQLWKYPNFTAIDLRFIINVLTYRLRKHNRSQVRSGARPSNTAVDSQTAALPVTKTAATNADAEHNQVGIG GLGVGRYFGSSDTDPTGHAYAVGIMLRGYYERVRIAIYIIVAWRIALGSTAAIYAWKLLRRLK* |
Coding | >Ani_SJS100_1|g5047.t1 ATGTCCTCCTCGTTGGCCCCGTCGCTTCATGACGTCCTGTCAGACTTGCACCACCGTCCATATCCCCATGTCCCC AATCCGCCCTCGTGTAAGAAACGTGCCTCCGTCGCTTTGATCCTCCGTGTCCGTCCCACATACCACCACTGGCCC AATTCCTCGTCTCTCTCTGCTTCAGATGTTTCCGCCTCCGTTCCGCAACGACTGGAGACGTTCTTCGCACAGGAC TGGGTCCAGAATGGAGAACCGGAAGCTCTCTTTATCAAACGAGCATCGCGCGTAGGCGATCGCTGGACTGGCCAT GTCGCCCTGCCAGGAGGAAAACGGGACCCAGAAGATGTCGACGATAAAGCTGCCGCAATTCGAGAAGCCGTGGAA GAGATCGGACTGGACTTGACAACGAGTGAATGTATCCATGTGGGAAATTTACCAGAGAGAGTAGTGACTTCAAGT TGGGGAACAGTACCTTTAATGGTTCTCTGTCCTTATGTCTTCTTGTTAACGTCCAGTGATTCGCCCACCCTCCGA TTACAGCCTACGGAAGTCGCTTCGACCCATTGGGTACCCCTCAGAGCCCTGCTCTCCTCATCCCTGAGAACGGTG GAACATGTGGACATGACTCAGCGGTTGGCGAATATGGGCGGGCTTCTGGCCCGCCTTGCATATCGCTCGATGATG GGCTACATGCAGTTTTCTGCCATCCGGCTGGCTCCAACTGAAAGCCTACAGTGCAACTCAACTCCGGGCTATATT CCAGAAGGCAACCAGCCGTCCACCTCTCTCGTTCAGCGCTGGAAATCCTGGTGTTTGGGCAGTCAGACACACTCC GGCCACCAAGACCAGCCACTCCTTCTCTGGGGTCTGACACTGGGTATTATGGCTGATTTCCTAGATATGCTTCCA CCTCACACCGCTGTACAGTTATGGAAATATCCAAATTTCACAGCAATAGACTTGCGATTCATTATAAACGTTCTG ACATATCGTCTGCGCAAGCACAACCGCAGTCAGGTCCGGTCAGGTGCCCGACCCAGCAACACGGCGGTGGATAGC CAAACCGCTGCCCTGCCGGTCACGAAGACCGCAGCGACCAATGCGGATGCGGAACACAATCAAGTCGGCATTGGA GGGCTTGGAGTAGGTAGGTATTTCGGATCATCTGATACAGACCCTACCGGCCATGCATATGCAGTGGGAATCATG CTCCGGGGCTACTATGAACGAGTGCGGATTGCCATCTACATCATCGTGGCCTGGAGGATCGCACTGGGCTCTACA GCCGCCATCTATGCATGGAAGCTGCTCCGCCGGCTAAAGTAG |
Transcript | >Ani_SJS100_1|g5047.t1 ATGTCCTCCTCGTTGGCCCCGTCGCTTCATGACGTCCTGTCAGACTTGCACCACCGTCCATATCCCCATGTCCCC AATCCGCCCTCGTGTAAGAAACGTGCCTCCGTCGCTTTGATCCTCCGTGTCCGTCCCACATACCACCACTGGCCC AATTCCTCGTCTCTCTCTGCTTCAGATGTTTCCGCCTCCGTTCCGCAACGACTGGAGACGTTCTTCGCACAGGAC TGGGTCCAGAATGGAGAACCGGAAGCTCTCTTTATCAAACGAGCATCGCGCGTAGGCGATCGCTGGACTGGCCAT GTCGCCCTGCCAGGAGGAAAACGGGACCCAGAAGATGTCGACGATAAAGCTGCCGCAATTCGAGAAGCCGTGGAA GAGATCGGACTGGACTTGACAACGAGTGAATGTATCCATGTGGGAAATTTACCAGAGAGAGTAGTGACTTCAAGT TGGGGAACAGTACCTTTAATGGTTCTCTGTCCTTATGTCTTCTTGTTAACGTCCAGTGATTCGCCCACCCTCCGA TTACAGCCTACGGAAGTCGCTTCGACCCATTGGGTACCCCTCAGAGCCCTGCTCTCCTCATCCCTGAGAACGGTG GAACATGTGGACATGACTCAGCGGTTGGCGAATATGGGCGGGCTTCTGGCCCGCCTTGCATATCGCTCGATGATG GGCTACATGCAGTTTTCTGCCATCCGGCTGGCTCCAACTGAAAGCCTACAGTGCAACTCAACTCCGGGCTATATT CCAGAAGGCAACCAGCCGTCCACCTCTCTCGTTCAGCGCTGGAAATCCTGGTGTTTGGGCAGTCAGACACACTCC GGCCACCAAGACCAGCCACTCCTTCTCTGGGGTCTGACACTGGGTATTATGGCTGATTTCCTAGATATGCTTCCA CCTCACACCGCTGTACAGTTATGGAAATATCCAAATTTCACAGCAATAGACTTGCGATTCATTATAAACGTTCTG ACATATCGTCTGCGCAAGCACAACCGCAGTCAGGTCCGGTCAGGTGCCCGACCCAGCAACACGGCGGTGGATAGC CAAACCGCTGCCCTGCCGGTCACGAAGACCGCAGCGACCAATGCGGATGCGGAACACAATCAAGTCGGCATTGGA GGGCTTGGAGTAGGTAGGTATTTCGGATCATCTGATACAGACCCTACCGGCCATGCATATGCAGTGGGAATCATG CTCCGGGGCTACTATGAACGAGTGCGGATTGCCATCTACATCATCGTGGCCTGGAGGATCGCACTGGGCTCTACA GCCGCCATCTATGCATGGAAGCTGCTCCGCCGGCTAAAGTAG |
Gene | >Ani_SJS100_1|g5047.t1 ATGTCCTCCTCGTTGGCCCCGTCGCTTCATGACGTCCTGTCAGACTTGCACCACCGTCCATATCCCCATGTCCCC AATCCGCCCTCGTGTAAGAAACGTGCCTCCGTCGCTTTGATCCTCCGTGTCCGTCCCACATACCACCACTGGCCC AATTCCTCGTCTCTCTCTGCTTCAGATGTTTCCGCCTCCGTTCCGCAACGACTGGAGACGTTCTTCGCACAGGAC TGGGTCCAGAATGGAGAACCGGAAGCTCTCTTTATCAAACGAGCATCGCGCGTAGGCGATCGCTGGACTGGCCAT GTCGCCCTGCCAGGAGGAAAACGGGACCCAGAAGATGTCGACGATAAAGCTGCCGCAATTCGAGAAGCCGTGGAA GAGATCGGACTGGACTTGACAACGAGTGAATGTATCCATGTGGGAAATTTACCAGAGAGAGTAGTGACTTCAAGT TGGGGAACAGTACCGTGCGTGTCTTCCCACGTCTCCTTTTCGTCGCTCATAGAAAGCATACCACTGACTATATTC CTTCTAGTTTAATGGTTCTCTGTCCTTATGTCTTCTTGTTAACGTCCAGTGATTCGCCCACCCTCCGATTACAGC CTACGGAAGTCGCTTCGACCCATTGGGTACCCCTCAGAGCCCTGCTCTCCTCATCCCTGAGAACGGTGGAACATG TGGACATGACTCAGCGGTTGGCGAATATGGGCGGGCTTCTGGCCCGCCTTGCATATCGCTCGATGATGGGCTACA TGCAGTTTTCTGCCATCCGGCTGGCTCCAACTGAAAGCCTACAGTGCAACTCAACTCCGGGCTATATTCCAGAAG GCAACCAGCCGTCCACCTCTCTCGTTCAGCGCTGGAAATCCTGGTGTTTGGGCAGTCAGACACACTCCGGCCACC AAGACCAGCCACTCCTTCTCTGGGGTCTGACACTGGGTATTATGGCTGATTTCCTAGATATGCTTCCACCTCACA CCGCTGTACAGTTATGGAAATATCCAAATTTCACAGCAATAGACTTGCGATTCATTATAAACGTTCTGACATATC GTCTGCGCAAGCACAACCGCAGTCAGGTCCGGTCAGGTGCCCGACCCAGCAACACGGCGGTGGATAGCCAAACCG CTGCCCTGCCGGTCACGAAGACCGCAGCGACCAATGCGGATGCGGAACACAATCAAGTCGGCATTGGAGGGCTTG GAGTAGGTAGGTATTTCGGATCATCTGATACAGACCCTACCGGCCATGCATATGCAGTGGGAATCATGCTCCGGG GCTACTATGAACGAGTGCGGATTGCCATCTACATCATCGTGGCCTGGAGGATCGCACTGGGCTCTACAGCCGCCA TCTATGCATGGAAGCTGCTCCGCCGGCTAAAGTAG |