Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5018.t1
Gene name
Locationscaffold_027:48112..49281
Strand-
Gene length (bp)1169
Transcript length (bp)822
Coding sequence length (bp)822
Protein length (aa) 274

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01302 CAP_GLY CAP-Gly domain 1.6E-26 173 252
PF14560 Ubiquitin_2 Ubiquitin-like domain 6.4E-15 21 98

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5018.t1
MAFQPTPADISVAITTPMASSSAEPRLLTERRITPTWSVSQLKGKLETMTGVPPGSQRLLLKSPGRPDQWVEGDD
SIIGDWGLMKGCEIEVHDTRPQSARPNFTDLSSVEKYVLPTSTYESLSNSVLAWKKNQKLGRFDPNALTPEESIR
QQSERDAAEIQQRGIAIDKRAIVLPSSPPHIRRGTIRFVGPVPTIPFPGVDPKKVQLDSEALPIWVGIELDEPLG
KNDGSVGGQRFFTCPNKTGVFVKPEKVEVGDFPPLELDDLDDEIMEEI*
Coding >Ani_SJS100_1|g5018.t1
ATGGCGTTTCAACCTACACCGGCGGACATTTCTGTCGCCATTACCACGCCCATGGCAAGCTCCAGTGCCGAGCCA
CGCTTGCTAACAGAGCGTCGTATCACTCCCACATGGAGCGTCTCGCAGCTCAAAGGCAAGCTGGAGACCATGACT
GGCGTACCTCCCGGTAGCCAGCGGCTGCTTCTCAAGTCCCCAGGCCGTCCTGACCAATGGGTTGAAGGTGACGAC
TCCATCATTGGGGATTGGGGTTTGATGAAAGGTTGTGAGATTGAGGTCCACGACACTCGGCCTCAATCAGCCCGG
CCAAATTTCACCGACCTATCATCCGTCGAGAAATACGTCCTTCCTACATCCACCTACGAATCACTCTCGAACTCC
GTCCTAGCATGGAAGAAGAACCAAAAACTTGGCCGGTTCGATCCAAACGCTCTAACCCCCGAAGAGTCGATCCGC
CAGCAATCAGAGAGAGATGCGGCGGAGATTCAACAAAGAGGTATTGCTATTGATAAACGTGCTATCGTCTTGCCC
TCGTCCCCGCCTCATATCCGACGAGGAACGATTCGGTTTGTTGGTCCAGTGCCTACGATCCCTTTCCCGGGCGTG
GACCCCAAGAAGGTGCAATTAGATTCCGAGGCTCTCCCTATCTGGGTTGGCATTGAGCTTGATGAGCCGTTGGGG
AAGAACGATGGCAGCGTAGGCGGCCAAAGGTTCTTCACCTGCCCGAATAAGACTGGTGTTTTCGTGAAGCCTGAG
AAAGTCGAGGTAGGAGACTTCCCGCCGTTGGAGTTGGATGACCTGGATGATGAAATCATGGAGGAGATTTGA
Transcript >Ani_SJS100_1|g5018.t1
ATGGCGTTTCAACCTACACCGGCGGACATTTCTGTCGCCATTACCACGCCCATGGCAAGCTCCAGTGCCGAGCCA
CGCTTGCTAACAGAGCGTCGTATCACTCCCACATGGAGCGTCTCGCAGCTCAAAGGCAAGCTGGAGACCATGACT
GGCGTACCTCCCGGTAGCCAGCGGCTGCTTCTCAAGTCCCCAGGCCGTCCTGACCAATGGGTTGAAGGTGACGAC
TCCATCATTGGGGATTGGGGTTTGATGAAAGGTTGTGAGATTGAGGTCCACGACACTCGGCCTCAATCAGCCCGG
CCAAATTTCACCGACCTATCATCCGTCGAGAAATACGTCCTTCCTACATCCACCTACGAATCACTCTCGAACTCC
GTCCTAGCATGGAAGAAGAACCAAAAACTTGGCCGGTTCGATCCAAACGCTCTAACCCCCGAAGAGTCGATCCGC
CAGCAATCAGAGAGAGATGCGGCGGAGATTCAACAAAGAGGTATTGCTATTGATAAACGTGCTATCGTCTTGCCC
TCGTCCCCGCCTCATATCCGACGAGGAACGATTCGGTTTGTTGGTCCAGTGCCTACGATCCCTTTCCCGGGCGTG
GACCCCAAGAAGGTGCAATTAGATTCCGAGGCTCTCCCTATCTGGGTTGGCATTGAGCTTGATGAGCCGTTGGGG
AAGAACGATGGCAGCGTAGGCGGCCAAAGGTTCTTCACCTGCCCGAATAAGACTGGTGTTTTCGTGAAGCCTGAG
AAAGTCGAGGTAGGAGACTTCCCGCCGTTGGAGTTGGATGACCTGGATGATGAAATCATGGAGGAGATTTGA
Gene >Ani_SJS100_1|g5018.t1
ATGGCGTTTCAACCTACACCGGCGGACATTTCTGTCGCCATTACCACGCCCATGGCAAGCTCCAGTGCCGAGCCA
CGCTTGCTAACAGAGCGTCGTATCACTCCCACATGGAGCGTCTCGCAGCTCAAAGGCAAGCTGGAGACCATGACT
GGCGTACCTCCCGGTAGCCAGCGGCTGCTTCTCAAGTCCCCAGGCCGTCCTGACCAATGGGTTGAAGGTGACGAC
TCCATCATTGGGGATTGGGGTTTGATGAAAGGTTGTGAGATTGAGGTAGGTCTTGTTCTTCTGTTCATCTCAATT
TCCGGCATCCTCGGCTTTCCCAGCCTCTGGGATTATAGTTACTGGTTAAAGATCGGTTTTGATTGTCACCCGCTC
AACGAATCCATGTCTTGCTTCTTTAAGACCTTGGTTTCCTTTTGTTCCACTCGGAGACACATCTCAACCAGGATT
GCCGGTTCATACCATGAGCCTATACTCATGTCTCAACCTAGGTCCACGACACTCGGCCTCAATCAGCCCGGCCAA
ATTTCACCGACCTATCATCCGTCGAGAAATACGTCCTTCCTACATCCACCTACGAATCACTCTCGAACTCCGTCC
TAGCATGGAAGAAGAACCAAAAACTTGGCCGGTTCGATCCAAACGCTCTAACCCCCGAAGAGTCGATCCGCCAGC
AATCAGAGAGAGATGCGGCGGAGATTCAACAAAGAGGTGAGTAACAAGATATCCTCGACCTTGTTACCCGGGTCG
GGGGAGTTGGGTCCGCGAACTTTCGATTCGAAAAGGATCAGTCCTGGGGTTTGAAGCAGAAGAATCCTAATGATT
GTACGTATCTAGGTATTGCTATTGATAAACGTGCTATCGTCTTGCCCTCGTCCCCGCCTCATATCCGACGAGGAA
CGATTCGGTTTGTTGGTCCAGTGCCTACGATCCCTTTCCCGGGCGTGGACCCCAAGAAGGTGCAATTAGATTCCG
AGGCTCTCCCTATCTGGGTTGGCATTGAGCTTGATGAGCCGTTGGGGAAGAACGATGGCAGCGTAGGCGGCCAAA
GGTTCTTCACCTGCCCGAATAAGACTGGTGTTTTCGTGAAGCCTGAGAAAGTCGAGGTAGGAGACTTCCCGCCGT
TGGAGTTGGATGACCTGGATGATGAAATCATGGAGGAGATTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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