Protein ID | Ani_SJS100_1|g5018.t1 |
Gene name | |
Location | scaffold_027:48112..49281 |
Strand | - |
Gene length (bp) | 1169 |
Transcript length (bp) | 822 |
Coding sequence length (bp) | 822 |
Protein length (aa) | 274 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01302 | CAP_GLY | CAP-Gly domain | 1.6E-26 | 173 | 252 |
PF14560 | Ubiquitin_2 | Ubiquitin-like domain | 6.4E-15 | 21 | 98 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 24 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5018.t1 MAFQPTPADISVAITTPMASSSAEPRLLTERRITPTWSVSQLKGKLETMTGVPPGSQRLLLKSPGRPDQWVEGDD SIIGDWGLMKGCEIEVHDTRPQSARPNFTDLSSVEKYVLPTSTYESLSNSVLAWKKNQKLGRFDPNALTPEESIR QQSERDAAEIQQRGIAIDKRAIVLPSSPPHIRRGTIRFVGPVPTIPFPGVDPKKVQLDSEALPIWVGIELDEPLG KNDGSVGGQRFFTCPNKTGVFVKPEKVEVGDFPPLELDDLDDEIMEEI* |
Coding | >Ani_SJS100_1|g5018.t1 ATGGCGTTTCAACCTACACCGGCGGACATTTCTGTCGCCATTACCACGCCCATGGCAAGCTCCAGTGCCGAGCCA CGCTTGCTAACAGAGCGTCGTATCACTCCCACATGGAGCGTCTCGCAGCTCAAAGGCAAGCTGGAGACCATGACT GGCGTACCTCCCGGTAGCCAGCGGCTGCTTCTCAAGTCCCCAGGCCGTCCTGACCAATGGGTTGAAGGTGACGAC TCCATCATTGGGGATTGGGGTTTGATGAAAGGTTGTGAGATTGAGGTCCACGACACTCGGCCTCAATCAGCCCGG CCAAATTTCACCGACCTATCATCCGTCGAGAAATACGTCCTTCCTACATCCACCTACGAATCACTCTCGAACTCC GTCCTAGCATGGAAGAAGAACCAAAAACTTGGCCGGTTCGATCCAAACGCTCTAACCCCCGAAGAGTCGATCCGC CAGCAATCAGAGAGAGATGCGGCGGAGATTCAACAAAGAGGTATTGCTATTGATAAACGTGCTATCGTCTTGCCC TCGTCCCCGCCTCATATCCGACGAGGAACGATTCGGTTTGTTGGTCCAGTGCCTACGATCCCTTTCCCGGGCGTG GACCCCAAGAAGGTGCAATTAGATTCCGAGGCTCTCCCTATCTGGGTTGGCATTGAGCTTGATGAGCCGTTGGGG AAGAACGATGGCAGCGTAGGCGGCCAAAGGTTCTTCACCTGCCCGAATAAGACTGGTGTTTTCGTGAAGCCTGAG AAAGTCGAGGTAGGAGACTTCCCGCCGTTGGAGTTGGATGACCTGGATGATGAAATCATGGAGGAGATTTGA |
Transcript | >Ani_SJS100_1|g5018.t1 ATGGCGTTTCAACCTACACCGGCGGACATTTCTGTCGCCATTACCACGCCCATGGCAAGCTCCAGTGCCGAGCCA CGCTTGCTAACAGAGCGTCGTATCACTCCCACATGGAGCGTCTCGCAGCTCAAAGGCAAGCTGGAGACCATGACT GGCGTACCTCCCGGTAGCCAGCGGCTGCTTCTCAAGTCCCCAGGCCGTCCTGACCAATGGGTTGAAGGTGACGAC TCCATCATTGGGGATTGGGGTTTGATGAAAGGTTGTGAGATTGAGGTCCACGACACTCGGCCTCAATCAGCCCGG CCAAATTTCACCGACCTATCATCCGTCGAGAAATACGTCCTTCCTACATCCACCTACGAATCACTCTCGAACTCC GTCCTAGCATGGAAGAAGAACCAAAAACTTGGCCGGTTCGATCCAAACGCTCTAACCCCCGAAGAGTCGATCCGC CAGCAATCAGAGAGAGATGCGGCGGAGATTCAACAAAGAGGTATTGCTATTGATAAACGTGCTATCGTCTTGCCC TCGTCCCCGCCTCATATCCGACGAGGAACGATTCGGTTTGTTGGTCCAGTGCCTACGATCCCTTTCCCGGGCGTG GACCCCAAGAAGGTGCAATTAGATTCCGAGGCTCTCCCTATCTGGGTTGGCATTGAGCTTGATGAGCCGTTGGGG AAGAACGATGGCAGCGTAGGCGGCCAAAGGTTCTTCACCTGCCCGAATAAGACTGGTGTTTTCGTGAAGCCTGAG AAAGTCGAGGTAGGAGACTTCCCGCCGTTGGAGTTGGATGACCTGGATGATGAAATCATGGAGGAGATTTGA |
Gene | >Ani_SJS100_1|g5018.t1 ATGGCGTTTCAACCTACACCGGCGGACATTTCTGTCGCCATTACCACGCCCATGGCAAGCTCCAGTGCCGAGCCA CGCTTGCTAACAGAGCGTCGTATCACTCCCACATGGAGCGTCTCGCAGCTCAAAGGCAAGCTGGAGACCATGACT GGCGTACCTCCCGGTAGCCAGCGGCTGCTTCTCAAGTCCCCAGGCCGTCCTGACCAATGGGTTGAAGGTGACGAC TCCATCATTGGGGATTGGGGTTTGATGAAAGGTTGTGAGATTGAGGTAGGTCTTGTTCTTCTGTTCATCTCAATT TCCGGCATCCTCGGCTTTCCCAGCCTCTGGGATTATAGTTACTGGTTAAAGATCGGTTTTGATTGTCACCCGCTC AACGAATCCATGTCTTGCTTCTTTAAGACCTTGGTTTCCTTTTGTTCCACTCGGAGACACATCTCAACCAGGATT GCCGGTTCATACCATGAGCCTATACTCATGTCTCAACCTAGGTCCACGACACTCGGCCTCAATCAGCCCGGCCAA ATTTCACCGACCTATCATCCGTCGAGAAATACGTCCTTCCTACATCCACCTACGAATCACTCTCGAACTCCGTCC TAGCATGGAAGAAGAACCAAAAACTTGGCCGGTTCGATCCAAACGCTCTAACCCCCGAAGAGTCGATCCGCCAGC AATCAGAGAGAGATGCGGCGGAGATTCAACAAAGAGGTGAGTAACAAGATATCCTCGACCTTGTTACCCGGGTCG GGGGAGTTGGGTCCGCGAACTTTCGATTCGAAAAGGATCAGTCCTGGGGTTTGAAGCAGAAGAATCCTAATGATT GTACGTATCTAGGTATTGCTATTGATAAACGTGCTATCGTCTTGCCCTCGTCCCCGCCTCATATCCGACGAGGAA CGATTCGGTTTGTTGGTCCAGTGCCTACGATCCCTTTCCCGGGCGTGGACCCCAAGAAGGTGCAATTAGATTCCG AGGCTCTCCCTATCTGGGTTGGCATTGAGCTTGATGAGCCGTTGGGGAAGAACGATGGCAGCGTAGGCGGCCAAA GGTTCTTCACCTGCCCGAATAAGACTGGTGTTTTCGTGAAGCCTGAGAAAGTCGAGGTAGGAGACTTCCCGCCGT TGGAGTTGGATGACCTGGATGATGAAATCATGGAGGAGATTTGA |