Protein ID | Ani_SJS100_1|g5017.t1 |
Gene name | |
Location | scaffold_027:45522..47748 |
Strand | + |
Gene length (bp) | 2226 |
Transcript length (bp) | 1896 |
Coding sequence length (bp) | 1896 |
Protein length (aa) | 632 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF15624 | Mif2_N | Kinetochore CENP-C fungal homologue, Mif2, N-terminal | 5.3E-36 | 14 | 135 |
PF11699 | CENP-C_C | Mif2/CENP-C like | 9.1E-36 | 497 | 580 |
PF07883 | Cupin_2 | Cupin domain | 7.9E-08 | 511 | 577 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 24 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5017.t1 MAPRGPAKAREYDYANVGKAGRRTGLMLKEGKRDEYGMEEVDGIFSSPETSPVKENGFSDRAEDSTGSDGMSIDE GNGPNPTDFLKSRRSSYFPPPVARSPMKTGLTGSPRRTPGLRSSQSPQREQPSSSPSDGKGLGSARGESRRDVSP LTSRSINAPPVLNHVNGARNNKLNAEPTEEPMDSGFSDSDAENQLNTDENGHSFVQTHDDFVDSFTAGDDALTDD HADEQDDTGADLDSPVTVSESRSRRGQAKPVPRVVRGVKGARAGASTAAQEHEIEEEQPAQKRKRPGRPPRTQRK SSNEVEKERPSKRPRVSDKADKNPSPSGNAELDKVVENYVNRTGPLKGRSLYILKREVPSEGAATHTRSGRVSVR PLAYWRNERCVYGDGEAVEGQRYPLSTIKEIIRTEELEPEKPKSNKRRPNKKSKSRKGKNDDSSDEEDGYVDPWE KESGILHGYIRRWDEEAQAVGEEEDIVDLAYAPAGMETRSVKDSSWRFAKLLSSPFLGSGIVELPPGGVKKPKNS KKMHMVFYICQGRVQVDISGVRFSAGKGCVFQVPRGNYYSFANTQNKDARLFFTQGCVPVENDDSAPGSATKPGA MDGDSSTPTGRPTGVKGRPKGKQKAGGRKAT* |
Coding | >Ani_SJS100_1|g5017.t1 ATGGCTCCCCGGGGCCCTGCGAAGGCTCGCGAGTATGATTATGCCAATGTCGGCAAAGCTGGAAGGCGCACCGGG TTAATGTTGAAGGAAGGGAAACGTGATGAATATGGAATGGAAGAAGTTGATGGTATATTCTCTTCGCCCGAGACG TCGCCCGTAAAAGAGAATGGCTTCAGTGACCGAGCTGAGGATTCTACTGGTTCGGATGGCATGTCTATAGACGAA GGAAATGGTCCGAACCCCACCGATTTTCTCAAAAGCAGACGAAGCTCTTACTTCCCGCCTCCTGTTGCGCGCTCT CCTATGAAGACCGGGCTGACTGGCTCACCTCGGAGAACTCCCGGCTTGCGATCCTCCCAAAGTCCGCAACGCGAA CAACCGTCTTCCAGTCCCTCAGACGGGAAGGGTCTGGGAAGTGCAAGGGGGGAATCACGACGAGATGTATCTCCA CTTACTAGTCGTTCCATCAATGCGCCACCAGTCCTGAACCACGTCAATGGTGCACGGAACAACAAACTTAATGCT GAACCAACAGAGGAGCCTATGGACTCCGGCTTTTCCGATAGCGATGCTGAGAATCAGCTAAACACAGACGAGAAC GGGCATTCATTTGTACAGACACACGACGACTTCGTTGACAGCTTCACTGCGGGCGATGATGCATTGACGGACGAC CATGCAGATGAACAAGACGACACTGGCGCCGACCTGGACTCGCCGGTAACCGTGTCAGAATCCCGCAGCAGGAGA GGACAGGCCAAACCCGTTCCAAGGGTTGTTAGAGGTGTGAAAGGCGCAAGGGCCGGAGCATCCACGGCCGCGCAG GAGCATGAGATTGAGGAAGAACAGCCGGCACAAAAACGCAAACGTCCGGGGAGGCCGCCGCGAACGCAACGCAAG TCTAGCAATGAAGTGGAGAAAGAACGGCCGTCGAAAAGGCCTAGGGTATCGGACAAAGCTGATAAAAACCCAAGT CCTTCAGGCAATGCAGAGCTGGACAAAGTGGTGGAGAACTATGTCAATCGCACAGGGCCATTGAAGGGTCGGAGT CTATATATCCTGAAGCGCGAAGTACCTTCCGAAGGCGCTGCCACCCATACAAGATCCGGGCGTGTTTCTGTAAGA CCTCTTGCATACTGGCGAAATGAACGATGTGTCTATGGCGATGGTGAAGCTGTGGAGGGCCAGCGGTATCCGCTA TCAACCATCAAGGAGATTATTCGCACGGAAGAACTCGAACCGGAGAAACCGAAATCGAATAAGCGCCGCCCTAAT AAGAAGTCCAAATCAAGGAAGGGTAAAAACGACGATTCCTCGGATGAAGAAGACGGATATGTTGATCCTTGGGAG AAGGAAAGCGGGATTCTGCATGGCTATATCAGGAGGTGGGACGAGGAAGCCCAGGCAGTTGGTGAAGAAGAGGAC ATCGTTGACCTTGCGTACGCCCCTGCTGGGATGGAGACAAGGAGTGTCAAGGACTCCTCGTGGCGGTTCGCCAAA CTTCTCAGTTCGCCTTTCTTGGGCTCTGGGATCGTGGAACTGCCGCCTGGAGGAGTAAAGAAGCCCAAGAATTCC AAGAAGATGCACATGGTTTTCTACATCTGCCAGGGTCGGGTTCAAGTAGACATCTCCGGTGTTCGTTTCAGTGCC GGCAAAGGGTGTGTCTTCCAGGTACCGAGAGGCAACTATTACAGTTTTGCCAATACGCAGAATAAGGATGCCCGG CTGTTCTTCACTCAAGGCTGCGTCCCGGTGGAGAACGACGACTCTGCTCCCGGGTCGGCGACCAAACCCGGTGCC ATGGATGGGGACTCCAGCACCCCGACTGGCCGTCCGACCGGCGTAAAAGGCCGACCGAAGGGCAAACAGAAAGCA GGCGGACGTAAGGCAACGTGA |
Transcript | >Ani_SJS100_1|g5017.t1 ATGGCTCCCCGGGGCCCTGCGAAGGCTCGCGAGTATGATTATGCCAATGTCGGCAAAGCTGGAAGGCGCACCGGG TTAATGTTGAAGGAAGGGAAACGTGATGAATATGGAATGGAAGAAGTTGATGGTATATTCTCTTCGCCCGAGACG TCGCCCGTAAAAGAGAATGGCTTCAGTGACCGAGCTGAGGATTCTACTGGTTCGGATGGCATGTCTATAGACGAA GGAAATGGTCCGAACCCCACCGATTTTCTCAAAAGCAGACGAAGCTCTTACTTCCCGCCTCCTGTTGCGCGCTCT CCTATGAAGACCGGGCTGACTGGCTCACCTCGGAGAACTCCCGGCTTGCGATCCTCCCAAAGTCCGCAACGCGAA CAACCGTCTTCCAGTCCCTCAGACGGGAAGGGTCTGGGAAGTGCAAGGGGGGAATCACGACGAGATGTATCTCCA CTTACTAGTCGTTCCATCAATGCGCCACCAGTCCTGAACCACGTCAATGGTGCACGGAACAACAAACTTAATGCT GAACCAACAGAGGAGCCTATGGACTCCGGCTTTTCCGATAGCGATGCTGAGAATCAGCTAAACACAGACGAGAAC GGGCATTCATTTGTACAGACACACGACGACTTCGTTGACAGCTTCACTGCGGGCGATGATGCATTGACGGACGAC CATGCAGATGAACAAGACGACACTGGCGCCGACCTGGACTCGCCGGTAACCGTGTCAGAATCCCGCAGCAGGAGA GGACAGGCCAAACCCGTTCCAAGGGTTGTTAGAGGTGTGAAAGGCGCAAGGGCCGGAGCATCCACGGCCGCGCAG GAGCATGAGATTGAGGAAGAACAGCCGGCACAAAAACGCAAACGTCCGGGGAGGCCGCCGCGAACGCAACGCAAG TCTAGCAATGAAGTGGAGAAAGAACGGCCGTCGAAAAGGCCTAGGGTATCGGACAAAGCTGATAAAAACCCAAGT CCTTCAGGCAATGCAGAGCTGGACAAAGTGGTGGAGAACTATGTCAATCGCACAGGGCCATTGAAGGGTCGGAGT CTATATATCCTGAAGCGCGAAGTACCTTCCGAAGGCGCTGCCACCCATACAAGATCCGGGCGTGTTTCTGTAAGA CCTCTTGCATACTGGCGAAATGAACGATGTGTCTATGGCGATGGTGAAGCTGTGGAGGGCCAGCGGTATCCGCTA TCAACCATCAAGGAGATTATTCGCACGGAAGAACTCGAACCGGAGAAACCGAAATCGAATAAGCGCCGCCCTAAT AAGAAGTCCAAATCAAGGAAGGGTAAAAACGACGATTCCTCGGATGAAGAAGACGGATATGTTGATCCTTGGGAG AAGGAAAGCGGGATTCTGCATGGCTATATCAGGAGGTGGGACGAGGAAGCCCAGGCAGTTGGTGAAGAAGAGGAC ATCGTTGACCTTGCGTACGCCCCTGCTGGGATGGAGACAAGGAGTGTCAAGGACTCCTCGTGGCGGTTCGCCAAA CTTCTCAGTTCGCCTTTCTTGGGCTCTGGGATCGTGGAACTGCCGCCTGGAGGAGTAAAGAAGCCCAAGAATTCC AAGAAGATGCACATGGTTTTCTACATCTGCCAGGGTCGGGTTCAAGTAGACATCTCCGGTGTTCGTTTCAGTGCC GGCAAAGGGTGTGTCTTCCAGGTACCGAGAGGCAACTATTACAGTTTTGCCAATACGCAGAATAAGGATGCCCGG CTGTTCTTCACTCAAGGCTGCGTCCCGGTGGAGAACGACGACTCTGCTCCCGGGTCGGCGACCAAACCCGGTGCC ATGGATGGGGACTCCAGCACCCCGACTGGCCGTCCGACCGGCGTAAAAGGCCGACCGAAGGGCAAACAGAAAGCA GGCGGACGTAAGGCAACGTGA |
Gene | >Ani_SJS100_1|g5017.t1 ATGGCTCCCCGGGGCCCTGCGAAGGCTCGCGAGTATGATTATGCCAATGTCGGCAAAGCTGGAAGGTCGGTATCA TCGATGCCATGTCTCATTGATCGCCCCTGTTTAGTATTTTTTTTTTTCTATCCCCTGCTCCCATTCCAGTCGCTT CCATCCATTATAATCTCGGGAGACTGATGCAGGCGACTTTCACAGGCGCACCGGGTTAATGTTGAAGGAAGGGAA ACGTGATGAATATGGAATGGAAGAAGTTGATGGTATATTCTCTTCGCCCGAGACGTCGCCCGTAAAAGAGAATGG CTTCAGTGACCGAGCTGAGGATTCTACTGGTTCGGATGGCATGTCTATAGACGAAGGTGCGTTCGTGTCACAGCT CGCCATCATTTTGGCTATATACTAACGCTGATATTTATCGGGCAGGAAATGGTCCGAACCCCACCGATTTTCTCA AAAGCAGACGAAGCTCTTACTTCCCGCCTCCTGTTGCGCGCTCTCCTATGAAGACCGGGCTGACTGGCTCACCTC GGAGAACTCCCGGCTTGCGATCCTCCCAAAGTCCGCAACGCGAACAACCGTCTTCCAGTCCCTCAGACGGGAAGG GTCTGGGAAGTGCAAGGGGGGAATCACGACGAGATGTATCTCCACTTACTAGTCGTTCCATCAATGCGCCACCAG TCCTGAACCACGTCAATGGTGCACGGAACAACAAACTTAATGCTGAACCAACAGAGGAGCCTATGGACTCCGGCT TTTCCGATAGCGATGCTGAGAATCAGCTAAACACAGACGAGAACGGGCATTCATTTGTACAGACACACGACGACT TCGTTGACAGCTTCACTGCGGGCGATGATGCATTGACGGACGACCATGCAGATGAACAAGACGACACTGGCGCCG ACCTGGACTCGCCGGTAACCGTGTCAGAATCCCGCAGCAGGAGAGGACAGGCCAAACCCGTTCCAAGGGTTGTTA GAGGTGTGAAAGGCGCAAGGGCCGGAGCATCCACGGCCGCGCAGGAGCATGAGATTGAGGAAGAACAGCCGGCAC AAAAACGCAAACGTCCGGGGAGGCCGCCGCGAACGCAACGCAAGTCTAGCAATGAAGTGGAGAAAGAACGGCCGT CGAAAAGGCCTAGGGTATCGGACAAAGCTGATAAAAACCCAAGTCCTTCAGGCAATGCAGAGCTGGACAAAGTGG TGGAGAACTATGTCAATCGCACAGGGCCATTGAAGGGTCGGAGTCTATATATCCTGAAGCGCGAAGTACCTTCCG AAGGCGCTGCCACCCATACAAGATCCGGGCGTGTTTCTGTAAGACCTCTTGCATACTGGCGAAATGAACGATGTG TCTATGGCGATGGTGAAGCTGTGGAGGGCCAGCGGTATCCGCTATCAACCATCAAGGAGATTATTCGCACGGAAG AACTCGAACCGGAGAAACCGAAATCGAATAAGCGCCGCCCTAATAAGAAGTCCAAATCAAGGAAGGGTAAAAACG ACGATTCCTCGGATGAAGAAGACGGATATGTTGATCCTTGGGAGAAGGAAAGCGGGATTCTGCATGGCTATATCA GGAGGTGGGACGAGGAAGCCCAGGCAGTTGGTGAAGAAGAGGACATCGTTGGTATGTACTGTCCTTTGACTATGG TTGTCGTGTGCTAACGCATTCGCTTGTAGACCTTGCGTACGCCCCTGCTGGGATGGAGACAAGGAGTGTCAAGGA CTCCTCGTGGCGGTTCGCCAAACTTCTCAGTTCGCCTTTCTTGGGCTCTGGGATCGTGGAACTGCCGCCTGGAGG AGTAAAGAAGCCCAAGAATTCCAAGAAGATGCACATGGTTTTCTACATCTGCCAGGGTCGGGTTCAAGTAGACAT CTCCGGTGTTCGTTTCAGTGCCGGCAAAGGGTGTGTCTTCCAGGTACCGAGAGGTGAGTGAGCTCCGTATACACC TTCCCTTGACAAGATGGGAGACGTGGCCCCGTACCAATGGAAGTTCTAATTGAGTTTGCAGGCAACTATTACAGT TTTGCCAATACGCAGAATAAGGATGCCCGGCTGTTCTTCACTCAAGGCTGCGTCCCGGTGGAGAACGACGACTCT GCTCCCGGGTCGGCGACCAAACCCGGTGCCATGGATGGGGACTCCAGCACCCCGACTGGCCGTCCGACCGGCGTA AAAGGCCGACCGAAGGGCAAACAGAAAGCAGGCGGACGTAAGGCAACGTGA |