Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g5016.t1
Gene name
Location	scaffold_027:44065..45124
Strand	-
Gene length (bp)	1059
Transcript length (bp)	1059
Coding sequence length (bp)	1059
Protein length (aa)	353

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01351	RNase_HII	Ribonuclease HII	3.0E-47	69	297

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g5016.t1 MGESAGISTAPLQGESPTTATGLFIPPSIDHSRLFAGESYSYYSPCPPVIATSKVNEPTTNSSPNYLILGVDEAG RGPVLGPMVYSAFYLPQDLHHTLLTRDYSFNDSKVLTPGVRANLMKLLCTPGNPLHESCGWAVKLLSARDISSGM MRPGTGAYNLNAQAMDATIELIRGIIEDRNMDVREVYIDTIGNPATYQQKLEKIFPSLRITVAKKADSLYPCVSA ASVAAKVTRDVALDLCHQAIYEDTHAEDSPRAVVPQSWGSGYPSDSKCANWLKKNMDPIFGWGNECRFSWGTAKE LLELKGRPKVDWPGEEENTQLRDFLLSSTSNTTKAQHELLEWYGARSTEVLS*
Coding	>Ani_SJS100_1\|g5016.t1 ATGGGCGAATCTGCAGGCATCTCCACTGCCCCTCTCCAGGGGGAGTCTCCCACTACTGCAACAGGCCTCTTCATC CCTCCAAGTATAGATCACTCTCGGCTTTTCGCCGGGGAGTCCTATTCTTACTATTCACCCTGTCCTCCCGTCATT GCAACCTCCAAAGTTAATGAACCTACTACGAACTCTTCACCAAATTACCTTATCTTGGGTGTAGACGAGGCCGGA CGCGGTCCAGTTCTAGGCCCCATGGTCTACAGCGCCTTCTACTTGCCCCAAGATCTGCACCATACTCTCTTGACT CGTGACTACAGCTTCAACGACAGCAAAGTCCTCACTCCCGGCGTACGCGCTAATCTCATGAAGCTACTATGTACC CCGGGAAATCCCTTACACGAATCCTGCGGATGGGCCGTGAAGCTACTATCAGCGCGTGACATCTCGTCCGGTATG ATGCGGCCTGGAACGGGAGCTTATAACCTGAATGCGCAAGCAATGGATGCTACCATTGAACTCATCCGTGGAATC ATTGAAGATCGCAACATGGACGTGCGAGAGGTCTACATCGATACGATTGGAAACCCCGCAACCTACCAACAGAAA CTCGAGAAGATATTTCCATCACTCAGAATCACCGTGGCGAAGAAGGCCGACTCGTTATATCCGTGCGTGAGTGCT GCAAGTGTTGCTGCCAAAGTCACCAGAGACGTCGCATTAGATCTCTGTCATCAAGCTATATACGAAGACACCCAT GCGGAAGATTCACCGAGGGCGGTGGTGCCGCAGAGTTGGGGAAGCGGCTATCCCTCTGATTCAAAGTGTGCCAAT TGGTTAAAGAAAAACATGGATCCGATTTTTGGATGGGGCAACGAATGCCGATTCAGTTGGGGCACCGCAAAAGAG TTGCTCGAGTTGAAGGGAAGGCCAAAGGTCGATTGGCCTGGAGAAGAAGAAAATACGCAGCTCAGGGACTTCCTC TTATCTTCGACCAGTAACACTACAAAAGCTCAGCATGAGTTGCTGGAATGGTACGGGGCAAGGTCCACAGAGGTC CTCTCTTAG
Transcript	>Ani_SJS100_1\|g5016.t1 ATGGGCGAATCTGCAGGCATCTCCACTGCCCCTCTCCAGGGGGAGTCTCCCACTACTGCAACAGGCCTCTTCATC CCTCCAAGTATAGATCACTCTCGGCTTTTCGCCGGGGAGTCCTATTCTTACTATTCACCCTGTCCTCCCGTCATT GCAACCTCCAAAGTTAATGAACCTACTACGAACTCTTCACCAAATTACCTTATCTTGGGTGTAGACGAGGCCGGA CGCGGTCCAGTTCTAGGCCCCATGGTCTACAGCGCCTTCTACTTGCCCCAAGATCTGCACCATACTCTCTTGACT CGTGACTACAGCTTCAACGACAGCAAAGTCCTCACTCCCGGCGTACGCGCTAATCTCATGAAGCTACTATGTACC CCGGGAAATCCCTTACACGAATCCTGCGGATGGGCCGTGAAGCTACTATCAGCGCGTGACATCTCGTCCGGTATG ATGCGGCCTGGAACGGGAGCTTATAACCTGAATGCGCAAGCAATGGATGCTACCATTGAACTCATCCGTGGAATC ATTGAAGATCGCAACATGGACGTGCGAGAGGTCTACATCGATACGATTGGAAACCCCGCAACCTACCAACAGAAA CTCGAGAAGATATTTCCATCACTCAGAATCACCGTGGCGAAGAAGGCCGACTCGTTATATCCGTGCGTGAGTGCT GCAAGTGTTGCTGCCAAAGTCACCAGAGACGTCGCATTAGATCTCTGTCATCAAGCTATATACGAAGACACCCAT GCGGAAGATTCACCGAGGGCGGTGGTGCCGCAGAGTTGGGGAAGCGGCTATCCCTCTGATTCAAAGTGTGCCAAT TGGTTAAAGAAAAACATGGATCCGATTTTTGGATGGGGCAACGAATGCCGATTCAGTTGGGGCACCGCAAAAGAG TTGCTCGAGTTGAAGGGAAGGCCAAAGGTCGATTGGCCTGGAGAAGAAGAAAATACGCAGCTCAGGGACTTCCTC TTATCTTCGACCAGTAACACTACAAAAGCTCAGCATGAGTTGCTGGAATGGTACGGGGCAAGGTCCACAGAGGTC CTCTCTTAG
Gene	>Ani_SJS100_1\|g5016.t1 ATGGGCGAATCTGCAGGCATCTCCACTGCCCCTCTCCAGGGGGAGTCTCCCACTACTGCAACAGGCCTCTTCATC CCTCCAAGTATAGATCACTCTCGGCTTTTCGCCGGGGAGTCCTATTCTTACTATTCACCCTGTCCTCCCGTCATT GCAACCTCCAAAGTTAATGAACCTACTACGAACTCTTCACCAAATTACCTTATCTTGGGTGTAGACGAGGCCGGA CGCGGTCCAGTTCTAGGCCCCATGGTCTACAGCGCCTTCTACTTGCCCCAAGATCTGCACCATACTCTCTTGACT CGTGACTACAGCTTCAACGACAGCAAAGTCCTCACTCCCGGCGTACGCGCTAATCTCATGAAGCTACTATGTACC CCGGGAAATCCCTTACACGAATCCTGCGGATGGGCCGTGAAGCTACTATCAGCGCGTGACATCTCGTCCGGTATG ATGCGGCCTGGAACGGGAGCTTATAACCTGAATGCGCAAGCAATGGATGCTACCATTGAACTCATCCGTGGAATC ATTGAAGATCGCAACATGGACGTGCGAGAGGTCTACATCGATACGATTGGAAACCCCGCAACCTACCAACAGAAA CTCGAGAAGATATTTCCATCACTCAGAATCACCGTGGCGAAGAAGGCCGACTCGTTATATCCGTGCGTGAGTGCT GCAAGTGTTGCTGCCAAAGTCACCAGAGACGTCGCATTAGATCTCTGTCATCAAGCTATATACGAAGACACCCAT GCGGAAGATTCACCGAGGGCGGTGGTGCCGCAGAGTTGGGGAAGCGGCTATCCCTCTGATTCAAAGTGTGCCAAT TGGTTAAAGAAAAACATGGATCCGATTTTTGGATGGGGCAACGAATGCCGATTCAGTTGGGGCACCGCAAAAGAG TTGCTCGAGTTGAAGGGAAGGCCAAAGGTCGATTGGCCTGGAGAAGAAGAAAATACGCAGCTCAGGGACTTCCTC TTATCTTCGACCAGTAACACTACAAAAGCTCAGCATGAGTTGCTGGAATGGTACGGGGCAAGGTCCACAGAGGTC CTCTCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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