Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5003.t1
Gene name
Locationscaffold_027:6172..7198
Strand+
Gene length (bp)1026
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05572 Peptidase_M43 Pregnancy-associated plasma protein-A 1.0E-12 221 310

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5003.t1
MTLLLNFHALFTVILVANLSTRCSALLSGRDFCSTPAPGESLRAEHRRLYDVQAQRDSTAEESREVVPWIEIETW
FHIVSSNEAANTVSDDMITSQLSYLQKAYESATITYRLEGITRHINDSWARNDDELGMKNALRRGNYGTLNVYFQ
TDLQASSDENSRDYPNDGNRRTDVSDQSSSTVLGFCTLPDPSVNSSSPRSSYIKDGCNVLADTMPGGSLAQYNKG
GTAVHEVGHWNGLLHTFEGESCSPDNEGDYIDDTPEQSEPTSGCPAEKDSCPDLPGLDAIHNFMDYSSDDCYESF
TPDQAERMRSMWSAMREGK*
Coding >Ani_SJS100_1|g5003.t1
ATGACATTGTTACTCAACTTCCACGCGCTCTTTACAGTCATTCTTGTTGCCAATCTTTCAACCAGATGCAGCGCA
CTGCTCTCTGGACGTGACTTTTGCTCCACGCCAGCGCCCGGTGAGTCACTCCGAGCGGAGCATAGGAGGCTGTAT
GATGTACAGGCCCAACGTGACAGCACCGCCGAGGAGAGCCGGGAGGTGGTGCCTTGGATTGAAATCGAGACATGG
TTTCATATTGTAAGCAGCAATGAAGCAGCAAACACAGTATCAGACGACATGATCACCAGCCAGCTTTCCTATCTT
CAGAAGGCATATGAAAGTGCGACTATCACCTATCGGTTGGAGGGCATAACTCGTCACATAAATGACTCGTGGGCG
CGAAATGATGATGAACTGGGGATGAAGAATGCCCTACGAAGGGGCAATTATGGCACATTAAATGTCTATTTCCAA
ACAGATCTCCAGGCGTCATCCGACGAGAATTCTCGGGACTATCCAAATGACGGTAACCGACGAACAGATGTGTCA
GATCAATCATCATCAACTGTCCTAGGCTTCTGTACGTTGCCTGACCCGAGTGTGAATTCCAGCAGCCCTCGTTCC
AGCTACATCAAGGATGGTTGTAACGTGTTAGCGGATACCATGCCGGGTGGTAGTTTAGCGCAGTACAACAAAGGC
GGCACAGCGGTTCATGAGGTTGGCCATTGGAATGGGCTGCTGCATACGTTCGAAGGTGAATCGTGCTCCCCTGAT
AATGAAGGAGATTACATTGATGACACCCCGGAGCAATCTGAGCCTACGAGCGGATGTCCCGCCGAGAAAGATTCA
TGCCCCGATCTTCCTGGCCTTGATGCTATTCATAATTTTATGGACTATTCATCTGATGACTGTTATGAGAGTTTT
ACTCCAGATCAAGCGGAGAGAATGAGGAGTATGTGGTCCGCTATGCGGGAAGGGAAGTGA
Transcript >Ani_SJS100_1|g5003.t1
ATGACATTGTTACTCAACTTCCACGCGCTCTTTACAGTCATTCTTGTTGCCAATCTTTCAACCAGATGCAGCGCA
CTGCTCTCTGGACGTGACTTTTGCTCCACGCCAGCGCCCGGTGAGTCACTCCGAGCGGAGCATAGGAGGCTGTAT
GATGTACAGGCCCAACGTGACAGCACCGCCGAGGAGAGCCGGGAGGTGGTGCCTTGGATTGAAATCGAGACATGG
TTTCATATTGTAAGCAGCAATGAAGCAGCAAACACAGTATCAGACGACATGATCACCAGCCAGCTTTCCTATCTT
CAGAAGGCATATGAAAGTGCGACTATCACCTATCGGTTGGAGGGCATAACTCGTCACATAAATGACTCGTGGGCG
CGAAATGATGATGAACTGGGGATGAAGAATGCCCTACGAAGGGGCAATTATGGCACATTAAATGTCTATTTCCAA
ACAGATCTCCAGGCGTCATCCGACGAGAATTCTCGGGACTATCCAAATGACGGTAACCGACGAACAGATGTGTCA
GATCAATCATCATCAACTGTCCTAGGCTTCTGTACGTTGCCTGACCCGAGTGTGAATTCCAGCAGCCCTCGTTCC
AGCTACATCAAGGATGGTTGTAACGTGTTAGCGGATACCATGCCGGGTGGTAGTTTAGCGCAGTACAACAAAGGC
GGCACAGCGGTTCATGAGGTTGGCCATTGGAATGGGCTGCTGCATACGTTCGAAGGTGAATCGTGCTCCCCTGAT
AATGAAGGAGATTACATTGATGACACCCCGGAGCAATCTGAGCCTACGAGCGGATGTCCCGCCGAGAAAGATTCA
TGCCCCGATCTTCCTGGCCTTGATGCTATTCATAATTTTATGGACTATTCATCTGATGACTGTTATGAGAGTTTT
ACTCCAGATCAAGCGGAGAGAATGAGGAGTATGTGGTCCGCTATGCGGGAAGGGAAGTGA
Gene >Ani_SJS100_1|g5003.t1
ATGACATTGTTACTCAACTTCCACGCGCTCTTTACAGTCATTCTTGTTGCCAATCTTTCAACCAGATGCAGCGCA
CTGCTCTCTGGACGTGACTTTTGCTCCACGCCAGCGCCCGGTGAGTCACTCCGAGCGGAGCATAGGAGGCTGTAT
GATGTACAGGCCCAACGTGACAGCACCGCCGAGGAGAGCCGGGAGGTGGTGCCTTGGATTGAAATCGAGACATGG
TTTCATATTGTAAGCAGCAATGAAGCAGCAAACACAGTATCAGACGACATGATCACCAGCCAGGTCCGTCACCAT
TCAACTTTTGACCCATGCCTGCGCAATGTCGTGTTTTGGACTAACAAGTCCTAGCTTTCCTATCTTCAGAAGGCA
TATGAAAGTGCGACTATCACCTATCGGTTGGAGGGCATAACTCGTCACATAAATGACTCGTGGGCGCGAAATGAT
GATGAACTGGGGATGAAGAATGCCCTACGAAGGGGCAATTATGGCACATTAAATGTCTATTTCCAAACAGATCTC
CAGGCGTCATCCGACGAGAATTCTCGGGACTATCCAAATGACGGTAACCGACGAACAGATGTGTCAGATCAATCA
TCATCAACTGTCCTAGGCTTCTGTACGTTGCCTGACCCGAGTGTGAATTCCAGCAGCCCTCGTTCCAGCTACATC
AAGGATGGTTGTAACGTGTTAGCGGATACCATGCCGGGTGGTAGTTTAGCGCAGTACAACAAAGGCGGCACAGCG
GTTCATGAGGTTGGCCATTGGAATGGGCTGCTGCATACGTTCGAAGGTGAATCGTGCTCCCCTGATAATGAAGGA
GATTACATTGATGACACCCCGGAGCAATCTGAGCCTACGAGCGGATGTCCCGCCGAGAAAGATTCATGCCCCGAT
CTTCCTGGCCTTGATGCTATTCATAATTTTATGGACTATTCATCTGATGACTGTTATGAGAGTTTTACTCCAGAT
CAAGCGGAGAGAATGAGGAGTATGTGGTCCGCTATGCGGGAAGGGAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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