Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g5002.t1
Gene name
Location	scaffold_027:4269..5751
Strand	+
Gene length (bp)	1482
Transcript length (bp)	1209
Coding sequence length (bp)	1209
Protein length (aa)	403

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03381	CDC50	LEM3 (ligand-effect modulator 3) family / CDC50 family	6.1E-100	71	371

GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 57	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	52	74	22
2	345	367	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g5002.t1 MSHPDATRAESLDDQEHRGEVDDKKPKNRRPANTAFRQQRLKAWQPILTPKSVLPLFFVIGVIFAPIGGLLLWAS SQVQEIVIDYSECAEKAPTSYAASISDQVKSSFKSSGEQSTPTWQRFNESGTTICRLTFKIPDTLEPPVLLYYRL TNFYQNHRRYVKSMDTDQLKGKAVDNSTIDGGSCDPLKLDPSTGKAYYPCGLIANSQFNDTIRSPQLLSGGVTAE TYNMTNKGIAWDSDKQLIKKTQYNKWQVVPPPNWHDRYPNGYVDGIPNLHEDEEFMVWMRTAALPAFSKLSRRND TTAMTAGVYQLDIEDRFPVTEYGGTKSILISTRTVMGGQNPFMGIAYVVVGGLCIVLGALFTIAHLVRPRKLGDH TYLTWNNEQESSAVATGRDGRFGSHAT*
Coding	>Ani_SJS100_1\|g5002.t1 ATGTCCCATCCCGACGCGACCCGTGCGGAGTCTTTGGACGACCAAGAACATAGGGGGGAGGTTGACGATAAGAAG CCTAAGAATAGGAGACCAGCAAATACTGCTTTCAGACAGCAGCGCTTGAAAGCCTGGCAACCAATATTGACCCCA AAGAGCGTACTGCCTCTTTTCTTTGTTATTGGTGTGATATTTGCCCCCATTGGTGGTTTGTTACTGTGGGCCAGT TCACAGGTACAAGAGATTGTCATAGACTATTCTGAATGTGCTGAGAAGGCGCCCACCTCCTATGCGGCTTCGATT TCAGATCAAGTCAAATCCTCGTTCAAATCATCAGGCGAACAATCTACTCCAACTTGGCAAAGATTCAATGAAAGC GGAACTACAATCTGTCGATTGACCTTTAAAATTCCGGATACCTTGGAGCCACCTGTGCTTTTATATTATCGCTTA ACGAACTTCTATCAGAATCATCGGAGATATGTGAAGTCCATGGACACAGACCAGCTGAAAGGAAAAGCAGTTGAC AACAGCACCATAGATGGTGGCTCTTGCGACCCCCTCAAACTTGACCCTTCAACTGGCAAAGCATACTATCCATGC GGCCTTATAGCTAACTCTCAGTTTAACGATACCATCCGCAGCCCACAGCTTCTGAGTGGTGGTGTGACTGCAGAG ACCTACAACATGACTAATAAAGGCATTGCCTGGGACAGTGACAAGCAGCTCATCAAGAAGACGCAGTATAATAAA TGGCAGGTGGTTCCTCCGCCTAATTGGCATGATCGCTACCCTAACGGTTATGTCGACGGTATACCTAATCTTCAT GAAGACGAAGAGTTCATGGTATGGATGAGAACTGCCGCGCTGCCGGCTTTCAGTAAGCTATCCCGCAGAAACGAC ACAACGGCAATGACTGCAGGAGTCTATCAACTGGACATTGAGGACCGCTTTCCTGTCACTGAGTACGGAGGTACT AAATCGATACTCATATCAACACGGACTGTGATGGGCGGTCAAAACCCATTCATGGGTATTGCCTACGTCGTTGTA GGTGGCCTGTGCATTGTTCTTGGGGCATTGTTTACTATTGCACATCTTGTTCGGCCGAGGAAACTTGGCGACCAC ACTTATTTGACCTGGAACAATGAGCAGGAGAGCTCGGCTGTGGCAACCGGGCGGGATGGCAGATTTGGCTCTCAT GCTACTTAA
Transcript	>Ani_SJS100_1\|g5002.t1 ATGTCCCATCCCGACGCGACCCGTGCGGAGTCTTTGGACGACCAAGAACATAGGGGGGAGGTTGACGATAAGAAG CCTAAGAATAGGAGACCAGCAAATACTGCTTTCAGACAGCAGCGCTTGAAAGCCTGGCAACCAATATTGACCCCA AAGAGCGTACTGCCTCTTTTCTTTGTTATTGGTGTGATATTTGCCCCCATTGGTGGTTTGTTACTGTGGGCCAGT TCACAGGTACAAGAGATTGTCATAGACTATTCTGAATGTGCTGAGAAGGCGCCCACCTCCTATGCGGCTTCGATT TCAGATCAAGTCAAATCCTCGTTCAAATCATCAGGCGAACAATCTACTCCAACTTGGCAAAGATTCAATGAAAGC GGAACTACAATCTGTCGATTGACCTTTAAAATTCCGGATACCTTGGAGCCACCTGTGCTTTTATATTATCGCTTA ACGAACTTCTATCAGAATCATCGGAGATATGTGAAGTCCATGGACACAGACCAGCTGAAAGGAAAAGCAGTTGAC AACAGCACCATAGATGGTGGCTCTTGCGACCCCCTCAAACTTGACCCTTCAACTGGCAAAGCATACTATCCATGC GGCCTTATAGCTAACTCTCAGTTTAACGATACCATCCGCAGCCCACAGCTTCTGAGTGGTGGTGTGACTGCAGAG ACCTACAACATGACTAATAAAGGCATTGCCTGGGACAGTGACAAGCAGCTCATCAAGAAGACGCAGTATAATAAA TGGCAGGTGGTTCCTCCGCCTAATTGGCATGATCGCTACCCTAACGGTTATGTCGACGGTATACCTAATCTTCAT GAAGACGAAGAGTTCATGGTATGGATGAGAACTGCCGCGCTGCCGGCTTTCAGTAAGCTATCCCGCAGAAACGAC ACAACGGCAATGACTGCAGGAGTCTATCAACTGGACATTGAGGACCGCTTTCCTGTCACTGAGTACGGAGGTACT AAATCGATACTCATATCAACACGGACTGTGATGGGCGGTCAAAACCCATTCATGGGTATTGCCTACGTCGTTGTA GGTGGCCTGTGCATTGTTCTTGGGGCATTGTTTACTATTGCACATCTTGTTCGGCCGAGGAAACTTGGCGACCAC ACTTATTTGACCTGGAACAATGAGCAGGAGAGCTCGGCTGTGGCAACCGGGCGGGATGGCAGATTTGGCTCTCAT GCTACTTAA
Gene	>Ani_SJS100_1\|g5002.t1 ATGTCCCATCCCGACGCGACCCGTGCGGAGTCTTTGGACGACCAAGAACATAGGGGGGAGGTTGACGATAAGAAG CCTAAGAATAGGAGACCAGCAAGTGAGGCTTTGACTTGATCTGAATGAGATGAACTATTCTTCATTAACACTAGC TTATTCCCACAGATACTGCTTTCAGACAGCAGCGCTTGAAAGCCTGGCAGTAAGCTACTTAGATGGTATATCCTG CTCTCGTGCTGACGCATATAGACCAATATTGACCCCAAAGAGCGTACTGCCTCTTTTCTTTGTTATTGGTGTGAT ATTTGCCCCCATTGGTGGTTTGTTACTGTGGGCCAGTTCACAGGTATGTAATACCTCCCAAAGGGCACCTTCTCG ATAACCAACAAGCGATCACCAGGTACAAGAGATTGTCATAGACTATTCTGAATGTGCTGAGAAGGCGCCCACCTC CTATGCGGCTTCGATTTCAGATCAAGTCAAATCCTCGTTCAAATCATCAGGCGAACAATCTACTCCAACTTGGCA AAGATTCAATGAAAGCGGAACTACAATCTGTCGATTGACCTTTAAAATTCCGGATACCTTGGAGCCACCTGTGCT TTTATATTATCGCTTAACGAACTTCTATCAGAATCATCGGAGATATGTGAAGTCCATGGACACAGACCAGCTGAA AGGAAAAGCAGTTGACAACAGCACCATAGATGGTGGCTCTTGCGACCCCCTCAAACTTGACCCTTCAACTGGCAA AGCATACTATCCATGCGGCCTTATAGCTAACTCTCAGTTTAACGATACCATCCGCAGCCCACAGCTTCTGAGTGG TGGTGTGACTGCAGAGACCTACAACATGACTAATAAAGGCATTGCCTGGGACAGTGACAAGCAGCTCATCAAGAA GACGCAGTATAATAAATGGCAGGTGGTTCCTCCGCCTAATTGGCATGATCGCTACCCTAACGGTTATGTCGACGG TATACCTAATCTTCATGAAGACGAAGAGTTCATGGTATGGATGAGAACTGCCGCGCTGCCGGCTTTCAGTAAGCT ATCCCGCAGAAACGACACAACGGCAATGACTGCAGGAGTCTATCAACTGGACATTGAGGACCGTAAGATTTAAGA AATAACTTAACATTAAGGTTAGCGCTAACCGCGTACAGGCTTTCCTGTCACTGAGTACGGAGGTACTAAATCGAT ACTCATATCAACACGGACTGTGATGGGCGGTCAAAACCCATTCATGGGTATTGCCTACGTCGTTGTAGGTGGCCT GTGCATTGTTCTTGGGGCATTGTTTACTATTGCACATCTTGTTCGGCCGAGGTAAGGAGATTTGATGAACTTGAC GTATTTTGTCCGTGCCTAGGCTGACTTATTAGGAAACTTGGCGACCACACTTATTTGACCTGGAACAATGAGCAG GAGAGCTCGGCTGTGGCAACCGGGCGGGATGGCAGATTTGGCTCTCATGCTACTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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