Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g4995.t1
Gene name
Location	scaffold_026:384205..385627
Strand	-
Gene length (bp)	1422
Transcript length (bp)	1236
Coding sequence length (bp)	1236
Protein length (aa)	412

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10607	CTLH	CTLH/CRA C-terminal to LisH motif domain	2.0E-33	166	318
PF13445	zf-RING_UBOX	RING-type zinc-finger	1.4E-06	356	395

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 40	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g4995.t1 MELVQKEHDRLSKKIKAGQGIKNVQSTIDLLQSARDAIAADPSQASITLAKLQNPVKSSFDSINDSLKETHSGLN KYSKSLDKLFKDRPLPSTEHDVLSSQEHLINRAIAMHLLREGQFSVASEFLNEMAQKKAMKKQQEGDIEAIDNAA SLLDLDEVPPGEVRQQFHTMYHILHELKENNNLLPAIQWSRENKEALEARGSNLEFELCRLQFVWLFYGGQHQQG PSPGGRQAALEYGRREFHTFLPRYLREVQQLMGAMAFCPNLRDSPYNHIFNNPSAWSDVAHSFTREFCSLLGLSA DSPLYVAATAGAIALPTLLKLQTIMKAKRTEWTTENELPVEIPLPPSYLFHSIFVCPVSKEQTTDENPPMMMPCG HVIAEESLKRLCKGSRFKCPYCPSESHPREARKVFL*
Coding	>Ani_SJS100_1\|g4995.t1 ATGGAGCTGGTGCAGAAGGAGCACGACCGGCTTTCCAAGAAGATCAAGGCCGGTCAAGGAATTAAGAACGTGCAG TCTACCATAGATTTACTTCAGTCGGCACGAGATGCAATTGCTGCAGATCCCAGTCAAGCATCCATTACACTGGCT AAGCTCCAGAATCCCGTCAAATCGTCTTTTGATTCCATCAACGATAGTCTAAAAGAAACACACAGTGGTCTCAAC AAATACTCCAAATCGTTAGATAAGTTGTTCAAAGATCGACCTTTGCCGAGCACCGAGCATGATGTCCTTTCGTCC CAAGAACACCTTATCAACAGGGCCATCGCCATGCACCTTCTCCGAGAAGGACAGTTTTCCGTTGCGTCGGAGTTC CTGAACGAAATGGCACAAAAGAAAGCGATGAAAAAGCAGCAAGAAGGAGATATAGAGGCTATAGACAATGCGGCC TCGCTCTTAGATCTCGATGAAGTTCCGCCGGGTGAGGTGCGGCAACAGTTCCACACCATGTACCACATCCTTCAT GAGCTGAAGGAAAACAACAACCTGCTGCCGGCAATACAGTGGTCCAGGGAGAATAAGGAGGCCTTGGAAGCGAGA GGTAGTAACCTTGAGTTCGAATTGTGCAGGCTGCAATTCGTCTGGCTTTTCTACGGCGGACAGCATCAGCAAGGA CCCAGTCCGGGTGGACGGCAGGCAGCTTTGGAATATGGCAGGCGTGAATTCCACACGTTCTTGCCCAGGTATCTG CGCGAGGTCCAACAGCTCATGGGTGCCATGGCATTTTGCCCCAATCTGCGAGACTCCCCGTACAATCATATCTTC AATAACCCGTCGGCATGGTCCGATGTGGCACACTCATTCACGCGAGAGTTTTGCTCGCTCCTCGGCTTGTCGGCC GATTCGCCCCTATATGTTGCTGCTACGGCTGGTGCGATAGCGTTGCCGACACTGTTGAAGTTGCAGACTATCATG AAAGCCAAACGCACCGAGTGGACCACGGAGAATGAGCTCCCGGTTGAGATTCCGCTACCGCCGTCATATCTCTTC CATTCTATTTTTGTATGTCCCGTGTCAAAGGAGCAAACCACGGATGAGAATCCCCCCATGATGATGCCCTGTGGG CATGTTATCGCGGAGGAGTCACTCAAACGGTTGTGCAAGGGTAGCCGGTTCAAGTGCCCTTACTGCCCGAGTGAG AGTCATCCTCGGGAGGCGCGAAAGGTATTCCTCTAG
Transcript	>Ani_SJS100_1\|g4995.t1 ATGGAGCTGGTGCAGAAGGAGCACGACCGGCTTTCCAAGAAGATCAAGGCCGGTCAAGGAATTAAGAACGTGCAG TCTACCATAGATTTACTTCAGTCGGCACGAGATGCAATTGCTGCAGATCCCAGTCAAGCATCCATTACACTGGCT AAGCTCCAGAATCCCGTCAAATCGTCTTTTGATTCCATCAACGATAGTCTAAAAGAAACACACAGTGGTCTCAAC AAATACTCCAAATCGTTAGATAAGTTGTTCAAAGATCGACCTTTGCCGAGCACCGAGCATGATGTCCTTTCGTCC CAAGAACACCTTATCAACAGGGCCATCGCCATGCACCTTCTCCGAGAAGGACAGTTTTCCGTTGCGTCGGAGTTC CTGAACGAAATGGCACAAAAGAAAGCGATGAAAAAGCAGCAAGAAGGAGATATAGAGGCTATAGACAATGCGGCC TCGCTCTTAGATCTCGATGAAGTTCCGCCGGGTGAGGTGCGGCAACAGTTCCACACCATGTACCACATCCTTCAT GAGCTGAAGGAAAACAACAACCTGCTGCCGGCAATACAGTGGTCCAGGGAGAATAAGGAGGCCTTGGAAGCGAGA GGTAGTAACCTTGAGTTCGAATTGTGCAGGCTGCAATTCGTCTGGCTTTTCTACGGCGGACAGCATCAGCAAGGA CCCAGTCCGGGTGGACGGCAGGCAGCTTTGGAATATGGCAGGCGTGAATTCCACACGTTCTTGCCCAGGTATCTG CGCGAGGTCCAACAGCTCATGGGTGCCATGGCATTTTGCCCCAATCTGCGAGACTCCCCGTACAATCATATCTTC AATAACCCGTCGGCATGGTCCGATGTGGCACACTCATTCACGCGAGAGTTTTGCTCGCTCCTCGGCTTGTCGGCC GATTCGCCCCTATATGTTGCTGCTACGGCTGGTGCGATAGCGTTGCCGACACTGTTGAAGTTGCAGACTATCATG AAAGCCAAACGCACCGAGTGGACCACGGAGAATGAGCTCCCGGTTGAGATTCCGCTACCGCCGTCATATCTCTTC CATTCTATTTTTGTATGTCCCGTGTCAAAGGAGCAAACCACGGATGAGAATCCCCCCATGATGATGCCCTGTGGG CATGTTATCGCGGAGGAGTCACTCAAACGGTTGTGCAAGGGTAGCCGGTTCAAGTGCCCTTACTGCCCGAGTGAG AGTCATCCTCGGGAGGCGCGAAAGGTATTCCTCTAG
Gene	>Ani_SJS100_1\|g4995.t1 ATGGAGCTGGTGCAGAAGGAGCACGACCGGCTTTCCAAGAAGATCAAGGCCGGTCAAGGAATTAAGAACGTGCAG TCTACCATAGATTTACTTCAGTCGGCACGAGATGCAATTGCTGCAGGTGCGTGTGCCTCGTCGGACGTTGCGCGG GCTTGATCCTGGAACTATACTGATCACGAGGACAATCCCAGATCCCAGTCAAGCATCCATTACACTGGCTAAGCT CCAGAATCCCGTCAAATCGTCTTTTGATTCCATCAACGATAGTCTAAAAGAAACACACAGTGGTCTCAACAAATA CTCCAAATCGTTAGATAAGGTAGCACGCGTCAGGCTCTTACGGTGAATGGCATATGTTAACTACTTCACTGTCGC AGTTGTTCAAAGATCGACCTTTGCCGAGCACCGAGCATGATGTCCTTTCGTCCCAAGAACACCTTATCAACAGGG CCATCGCCATGCACCTTCTCCGAGAAGGACAGTTTTCCGTTGCGTCGGAGTTCCTGAACGAAATGGCACAAAAGA AAGCGATGAAAAAGCAGCAAGAAGGAGATATAGAGGCTATAGACAATGCGGCCTCGCTCTTAGATCTCGATGAAG TTCCGCCGGGTGAGGTGCGGCAACAGTTCCACACCATGTACCACATCCTTCATGAGCTGAAGGAAAACAACAACC TGCTGCCGGCAATACAGTGGTCCAGGGAGAATAAGGAGGCCTTGGAAGCGAGAGGTAGTAACCTTGAGTTCGAAT TGTGCAGGCTGCAATTCGTCTGGCTTTTCTACGGCGGACAGCATCAGCAAGGACCCAGTCCGGGTGGACGGCAGG CAGCTTTGGAATATGGCAGGCGTGAATTCCACACGTTCTTGCCCAGGTATCTGCGCGAGGTCCAACAGCTCATGG GTGCCATGGCATTTTGCCCCAATCTGCGAGACTCCCCGTACAATCATATCTTCAATAACCCGTCGGCATGGTCCG ATGTGGCACACTCATTCACGCGAGAGTTTTGCTCGCTCCTCGGCTTGTCGGCCGATTCGCCCCTATATGTTGCTG CTACGGCTGGTGCGATAGCGTTGCCGACACTGTTGAAGTTGCAGACTATCATGAAAGCCAAACGCACCGAGTGGA CCACGGAGAATGAGCTCCCGGTAAGTTACCTTGATTGGCATGCATGACGGTTCGTGGACTGACTGGTACGCCTTA TAGGTTGAGATTCCGCTACCGCCGTCATATCTCTTCCATTCTATTTTTGTATGTCCCGTGTCAAAGGAGCAAACC ACGGATGAGAATCCCCCCATGATGATGCCCTGTGGGCATGTTATCGCGGAGGAGTCACTCAAACGGTTGTGCAAG GGTAGCCGGTTCAAGTGCCCTTACTGCCCGAGTGAGAGTCATCCTCGGGAGGCGCGAAAGGTATTCCTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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