Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4984.t1
Gene name
Locationscaffold_026:354964..356469
Strand-
Gene length (bp)1505
Transcript length (bp)1281
Coding sequence length (bp)1281
Protein length (aa) 427

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 1.8E-10 361 405
PF17123 zf-RING_11 RING-like zinc finger 2.8E-09 362 390
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 7.4E-08 362 404
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 4.4E-06 362 404

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0043169 cation binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 211 233 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4984.t1
MTAKSLTTVATLFADPTNTTIALNESSIFSLKLDDTVQTLSKQKAPDQGSIQGLLFVPSLGNQNPCNNATEPYIP
DNVTRLQGVTPFDGRVIGLAPWISDECSQAFLNVSQGTVPAALLFFLPSNDDKKPPAANDPAWQLGGSASWQSQS
NFPVYGIPGAAGATLMEQLSRDGSVPDPDDQDNLTALSSSGASRLIAVIDIDSGAKKMPSIWGFILAILGTVLVL
TIILLLFYQLVHRRHQRELQRRLEAGEADLEQLAQLHIKVPPEFLETMPIYIYMGDGDDNESTHENSTPGNLPRI
TEHSAEDIDPKTPTVAIREADNEAEKAIDGESIRRPSQATIAGHPDAYVRHKNRLSRQQTTCAICLDDFEPDLSA
VRELPCGHIYHPPCIDTSLTQSSSLCPLCKKSVLPSSWFRFPPEDPWLQPH*
Coding >Ani_SJS100_1|g4984.t1
ATGACTGCCAAATCGCTCACCACGGTTGCGACGCTCTTTGCTGATCCGACAAACACCACCATCGCTCTGAACGAG
AGTTCGATCTTTTCTCTCAAGCTTGACGATACCGTTCAAACGCTGTCGAAACAAAAAGCCCCGGACCAAGGCTCA
ATTCAGGGACTTCTCTTTGTTCCCAGCCTCGGAAACCAAAATCCATGCAACAATGCCACTGAACCGTATATCCCG
GACAACGTCACCCGCCTCCAAGGCGTCACGCCGTTCGACGGCCGTGTGATCGGGCTGGCACCTTGGATAAGCGAC
GAATGTTCGCAGGCGTTTCTCAATGTCTCGCAGGGGACCGTGCCGGCCGCGCTGCTCTTTTTTCTGCCGTCCAAC
GATGACAAAAAGCCGCCAGCGGCAAATGACCCGGCCTGGCAGCTGGGAGGAAGCGCTAGCTGGCAATCGCAGAGC
AACTTTCCGGTGTACGGAATCCCCGGCGCGGCGGGTGCTACCTTGATGGAACAACTGTCACGCGACGGGAGTGTG
CCCGATCCCGATGACCAAGACAACCTAACTGCATTGTCGTCGTCAGGGGCTAGCAGATTGATAGCGGTCATAGAT
ATAGATAGTGGCGCAAAGAAGATGCCCAGTATATGGGGGTTCATTCTCGCCATTCTCGGGACGGTCCTCGTACTT
ACTATTATCCTACTTTTATTCTACCAACTGGTGCACAGGCGGCATCAGCGGGAGCTTCAGCGCCGCCTGGAAGCC
GGAGAAGCAGACTTGGAGCAGCTAGCCCAGCTTCATATCAAAGTTCCGCCAGAATTCTTGGAGACGATGCCAATC
TACATCTACATGGGCGATGGTGACGACAACGAATCGACCCATGAGAATTCAACACCTGGGAATCTACCACGGATC
ACCGAACACTCTGCTGAAGACATAGACCCCAAAACACCCACCGTCGCAATTCGTGAGGCGGACAATGAGGCGGAA
AAAGCAATAGACGGCGAGTCCATCAGACGACCCTCGCAGGCGACAATAGCAGGCCACCCAGACGCCTATGTACGG
CACAAAAACCGACTCAGCCGACAGCAAACGACGTGCGCGATCTGCCTGGATGATTTCGAGCCGGATTTATCAGCA
GTGCGTGAGCTGCCGTGCGGACACATCTACCACCCACCATGCATCGATACATCCCTAACGCAGAGCAGCAGTCTC
TGCCCGCTATGCAAGAAGAGCGTGCTCCCAAGCAGCTGGTTCAGATTTCCACCAGAAGACCCATGGCTGCAACCT
CACTAG
Transcript >Ani_SJS100_1|g4984.t1
ATGACTGCCAAATCGCTCACCACGGTTGCGACGCTCTTTGCTGATCCGACAAACACCACCATCGCTCTGAACGAG
AGTTCGATCTTTTCTCTCAAGCTTGACGATACCGTTCAAACGCTGTCGAAACAAAAAGCCCCGGACCAAGGCTCA
ATTCAGGGACTTCTCTTTGTTCCCAGCCTCGGAAACCAAAATCCATGCAACAATGCCACTGAACCGTATATCCCG
GACAACGTCACCCGCCTCCAAGGCGTCACGCCGTTCGACGGCCGTGTGATCGGGCTGGCACCTTGGATAAGCGAC
GAATGTTCGCAGGCGTTTCTCAATGTCTCGCAGGGGACCGTGCCGGCCGCGCTGCTCTTTTTTCTGCCGTCCAAC
GATGACAAAAAGCCGCCAGCGGCAAATGACCCGGCCTGGCAGCTGGGAGGAAGCGCTAGCTGGCAATCGCAGAGC
AACTTTCCGGTGTACGGAATCCCCGGCGCGGCGGGTGCTACCTTGATGGAACAACTGTCACGCGACGGGAGTGTG
CCCGATCCCGATGACCAAGACAACCTAACTGCATTGTCGTCGTCAGGGGCTAGCAGATTGATAGCGGTCATAGAT
ATAGATAGTGGCGCAAAGAAGATGCCCAGTATATGGGGGTTCATTCTCGCCATTCTCGGGACGGTCCTCGTACTT
ACTATTATCCTACTTTTATTCTACCAACTGGTGCACAGGCGGCATCAGCGGGAGCTTCAGCGCCGCCTGGAAGCC
GGAGAAGCAGACTTGGAGCAGCTAGCCCAGCTTCATATCAAAGTTCCGCCAGAATTCTTGGAGACGATGCCAATC
TACATCTACATGGGCGATGGTGACGACAACGAATCGACCCATGAGAATTCAACACCTGGGAATCTACCACGGATC
ACCGAACACTCTGCTGAAGACATAGACCCCAAAACACCCACCGTCGCAATTCGTGAGGCGGACAATGAGGCGGAA
AAAGCAATAGACGGCGAGTCCATCAGACGACCCTCGCAGGCGACAATAGCAGGCCACCCAGACGCCTATGTACGG
CACAAAAACCGACTCAGCCGACAGCAAACGACGTGCGCGATCTGCCTGGATGATTTCGAGCCGGATTTATCAGCA
GTGCGTGAGCTGCCGTGCGGACACATCTACCACCCACCATGCATCGATACATCCCTAACGCAGAGCAGCAGTCTC
TGCCCGCTATGCAAGAAGAGCGTGCTCCCAAGCAGCTGGTTCAGATTTCCACCAGAAGACCCATGGCTGCAACCT
CACTAG
Gene >Ani_SJS100_1|g4984.t1
ATGAGTATGCTCCCCTTGCTTCAGAGAATGCTGCACATTCCTTCGATCGTGACTGCCTGTTCATCCTTCCGTGGC
TGTCTCACTGTCCATACCTGAGCGATCGCTGATATGCCTCTTATCTAGCTGCCAAATCGCTCACCACGGTTGCGA
CGCTCTTTGCTGATCCGACAAACACCACCATCGCTCTGAACGTGCGTCAGACGCCCGTGAAATTCCGTGTCCGAG
AAGCTGACTGTGCCCCTAGGAGAGTTCGATCTTTTCTCTCAAGCTTGACGATACCGTTCAAACGCTGTCGAAACA
AAAAGCCCCGGACCAAGGCTCAATTCAGGGACTTCTCTTTGTTCCCAGCCTCGGAAACCAAAATCCATGCAACAA
TGCCACTGAACCGTATATCCCGGACAACGTCACCCGCCTCCAAGGCGTCACGCCGTTCGACGGCCGTGTGATCGG
GCTGGCACCTTGGATAAGCGACGAATGTTCGCAGGCGTTTCTCAATGTCTCGCAGGGGACCGTGCCGGCCGCGCT
GCTCTTTTTTCTGCCGTCCAACGATGACAAAAAGCCGCCAGCGGCAAATGACCCGGCCTGGCAGCTGGGAGGAAG
CGCTAGCTGGCAATCGCAGAGCAACTTTCCGGTGTACGGAATCCCCGGCGCGGCGGGTGCTACCTTGATGGAACA
ACTGTCACGCGACGGGAGTGTGCCCGATCCCGATGACCAAGACAACCTAACTGCATTGTCGTCGTCAGGGGCTAG
CAGATTGATAGCGGTCATAGATATAGGTAGGCTTGTGTTGTCGTGACATTGCCAGTAAGAAGCTGACATATGGCT
CAGATAGTGGCGCAAAGAAGATGCCCAGTATATGGGGGTTCATTCTCGCCATTCTCGGGACGGTCCTCGTACTTA
CTATTATCCTACTTTTATTCTACCAACTGGTGCACAGGCGGCATCAGCGGGAGCTTCAGCGCCGCCTGGAAGCCG
GAGAAGCAGACTTGGAGCAGCTAGCCCAGCTTCATATCAAAGTTCCGCCAGAATTCTTGGAGACGATGCCAATCT
ACATCTACATGGGCGATGGTGACGACAACGAATCGACCCATGAGAATTCAACACCTGGGAATCTACCACGGATCA
CCGAACACTCTGCTGAAGACATAGACCCCAAAACACCCACCGTCGCAATTCGTGAGGCGGACAATGAGGCGGAAA
AAGCAATAGACGGCGAGTCCATCAGACGACCCTCGCAGGCGACAATAGCAGGCCACCCAGACGCCTATGTACGGC
ACAAAAACCGACTCAGCCGACAGCAAACGACGTGCGCGATCTGCCTGGATGATTTCGAGCCGGATTTATCAGCAG
TGCGTGAGCTGCCGTGCGGACACATCTACCACCCACCATGCATCGATACATCCCTAACGCAGAGCAGCAGTCTCT
GCCCGCTATGCAAGAAGAGCGTGCTCCCAAGCAGCTGGTTCAGATTTCCACCAGAAGACCCATGGCTGCAACCTC
ACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail