Protein ID | Ani_SJS100_1|g498.t1 |
Gene name | |
Location | scaffold_002:159740..161140 |
Strand | - |
Gene length (bp) | 1400 |
Transcript length (bp) | 1167 |
Coding sequence length (bp) | 1167 |
Protein length (aa) | 389 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 44 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 26 | 48 | 22 |
2 | 61 | 83 | 22 |
3 | 103 | 125 | 22 |
4 | 138 | 160 | 22 |
5 | 188 | 210 | 22 |
6 | 217 | 239 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g498.t1 MMDSHNHFARTDDGAHGSYMSPRGGRALAVSVVFTSLATCCVAARIYTRTKLMHRMEPNDWMIMLSLTLSYVFMG LFVVEAMNGMGMHEAHIPPSVLLKQMKAFWLTIPFYNAALLLAKASILMQYFRVFPTRRMRRISWIMIGVLATYG SWAVLSAFLNCIPVAKFWNPTLPGYCLSMEGLWFSNASMHIATDIVILLIPIPALSGLELPQRQKMALISIFALG GFVCVTSVCRLVSLKKISDSSDPTYDNVGAASWSAIECNTGIICACLPTLRPLISRLLPHFLSTLSGGGHAYGYA HAPSSQSQPPTFWNGTGTVTTTITTHMDDLEYAHCTGDSDRYLTLVPGHEFGGKGKIMVRETNNNSAGLRDSVTG KDVRSDIASPSSS* |
Coding | >Ani_SJS100_1|g498.t1 ATGATGGACTCCCACAACCATTTCGCCCGGACGGACGATGGTGCGCACGGGTCATACATGTCACCCCGGGGGGGT CGAGCGTTAGCCGTCAGTGTTGTCTTTACCAGTTTAGCAACATGTTGTGTTGCCGCTCGTATTTACACGCGCACC AAGTTGATGCATCGCATGGAGCCAAACGATTGGATGATAATGCTATCCTTGACGTTGTCCTATGTCTTTATGGGC CTATTTGTTGTGGAGGCCATGAATGGGATGGGCATGCATGAGGCACACATCCCACCATCAGTCCTGTTAAAGCAG ATGAAGGCATTCTGGCTTACCATTCCGTTCTACAATGCTGCATTGCTGCTTGCCAAAGCGTCAATATTAATGCAG TATTTTCGCGTGTTCCCAACCCGGCGCATGCGGCGTATTTCTTGGATCATGATCGGTGTGCTTGCTACCTACGGG TCGTGGGCGGTTCTCAGTGCTTTCCTCAACTGTATCCCCGTCGCCAAATTCTGGAACCCCACTCTTCCGGGATAC TGTCTGAGCATGGAGGGACTGTGGTTCTCGAATGCGTCCATGCACATCGCAACCGATATTGTGATTCTATTGATA CCAATCCCGGCCTTGTCGGGGCTTGAATTGCCGCAGAGGCAGAAAATGGCCTTGATTTCAATCTTCGCTCTGGGT GGATTTGTCTGCGTCACTAGTGTTTGCCGGTTGGTTTCCCTGAAGAAGATTTCCGATTCTAGCGACCCTACCTAT GACAATGTTGGTGCTGCATCCTGGTCTGCAATCGAATGCAACACGGGGATAATCTGTGCTTGCCTGCCTACCCTC CGGCCTCTCATTTCGCGACTCCTTCCACACTTCCTCTCGACTCTAAGTGGTGGGGGCCATGCTTACGGCTACGCA CATGCGCCTTCGTCGCAAAGCCAACCGCCAACGTTCTGGAACGGCACCGGCACGGTGACGACTACGATTACCACG CACATGGACGATCTGGAGTACGCTCATTGCACGGGAGATTCGGACAGATATCTGACACTTGTTCCGGGACATGAA TTTGGCGGCAAAGGGAAGATTATGGTGCGAGAGACCAACAATAACTCGGCCGGTCTCCGCGATTCGGTGACGGGG AAGGATGTGCGATCAGACATTGCATCGCCATCATCATCGTGA |
Transcript | >Ani_SJS100_1|g498.t1 ATGATGGACTCCCACAACCATTTCGCCCGGACGGACGATGGTGCGCACGGGTCATACATGTCACCCCGGGGGGGT CGAGCGTTAGCCGTCAGTGTTGTCTTTACCAGTTTAGCAACATGTTGTGTTGCCGCTCGTATTTACACGCGCACC AAGTTGATGCATCGCATGGAGCCAAACGATTGGATGATAATGCTATCCTTGACGTTGTCCTATGTCTTTATGGGC CTATTTGTTGTGGAGGCCATGAATGGGATGGGCATGCATGAGGCACACATCCCACCATCAGTCCTGTTAAAGCAG ATGAAGGCATTCTGGCTTACCATTCCGTTCTACAATGCTGCATTGCTGCTTGCCAAAGCGTCAATATTAATGCAG TATTTTCGCGTGTTCCCAACCCGGCGCATGCGGCGTATTTCTTGGATCATGATCGGTGTGCTTGCTACCTACGGG TCGTGGGCGGTTCTCAGTGCTTTCCTCAACTGTATCCCCGTCGCCAAATTCTGGAACCCCACTCTTCCGGGATAC TGTCTGAGCATGGAGGGACTGTGGTTCTCGAATGCGTCCATGCACATCGCAACCGATATTGTGATTCTATTGATA CCAATCCCGGCCTTGTCGGGGCTTGAATTGCCGCAGAGGCAGAAAATGGCCTTGATTTCAATCTTCGCTCTGGGT GGATTTGTCTGCGTCACTAGTGTTTGCCGGTTGGTTTCCCTGAAGAAGATTTCCGATTCTAGCGACCCTACCTAT GACAATGTTGGTGCTGCATCCTGGTCTGCAATCGAATGCAACACGGGGATAATCTGTGCTTGCCTGCCTACCCTC CGGCCTCTCATTTCGCGACTCCTTCCACACTTCCTCTCGACTCTAAGTGGTGGGGGCCATGCTTACGGCTACGCA CATGCGCCTTCGTCGCAAAGCCAACCGCCAACGTTCTGGAACGGCACCGGCACGGTGACGACTACGATTACCACG CACATGGACGATCTGGAGTACGCTCATTGCACGGGAGATTCGGACAGATATCTGACACTTGTTCCGGGACATGAA TTTGGCGGCAAAGGGAAGATTATGGTGCGAGAGACCAACAATAACTCGGCCGGTCTCCGCGATTCGGTGACGGGG AAGGATGTGCGATCAGACATTGCATCGCCATCATCATCGTGA |
Gene | >Ani_SJS100_1|g498.t1 ATGATGGACTCCCACAACCATTTCGCCCGGACGGACGATGGTGCGCACGGGTCATACATGTCACCCCGGGGGGGT CGAGCGTTAGCCGTCAGTGTTGTCTTTACCAGTTTAGCAACATGTTGTGTTGCCGCTCGTATTTACACGCGCACC AAGTTGATGCATCGCATGGAGCCAAACGATTGGATGATAATGCTATCCTTGGTAGGTGCATGAATCCTCGACGGA AAGGTAGCAGGTTGCTGACTATTAGGATTGGCAAGACGTTGTCCTATGTCTTTATGGGCCTATTTGTTGTGGAGG CCATGAATGGGATGGGCATGCATGAGGCACACATCCCACCATCAGTCCTGTTAAAGCAGATGAAGGTAAGTCAGT ACTTCTATACAGTATGCACTGCTTTTCATTAACATAAGTGTGATCGATCAGGCATTCTGGCTTACCATTCCGTTC TACAATGCTGCATTGCTGCTTGCCAAAGCGTCAATATTAATGCAGTATTTTCGCGTGTTCCCAACCCGGCGCATG CGGCGTATTTCTTGGATCATGATCGGTGTGCTTGCTACCTACGGGTCGTGGGCGGTTCTCAGTGCTTTCCTCAAC TGTATCCCCGTCGCCAAATTCTGGAACCCCACTCTTCCGGGATACTGTCTGAGCATGGAGGGACTGTGGTTCTCG AATGCGTCCATGCACATCGCAACCGATATTGTGATTCTATTGATACCAATCCCGGCCTTGTCGGGGCTTGAATTG CCGCAGAGGCAGAAAATGGCCTTGATTTCAATCTTCGCTCTGGGTGGATTGTGAGTGTCCCAGTACCCACGCGCT GTTGGCGATGAACTCTTACTAACGCTATATCCAGTGTCTGCGTCACTAGTGTTTGCCGGTTGGTTTCCCTGAAGA AGATTTCCGATTCTAGCGACCCTACCTGTAAGTCGTCCCTTTATGGGCATCACGCGGCGTGTGGCTAAACAGAAT GCTTAGATGACAATGTTGGTGCTGCATCCTGGTCTGCAATCGAATGCAACACGGGGATAATCTGTGCTTGCCTGC CTACCCTCCGGCCTCTCATTTCGCGACTCCTTCCACACTTCCTCTCGACTCTAAGTGGTGGGGGCCATGCTTACG GCTACGCACATGCGCCTTCGTCGCAAAGCCAACCGCCAACGTTCTGGAACGGCACCGGCACGGTGACGACTACGA TTACCACGCACATGGACGATCTGGAGTACGCTCATTGCACGGGAGATTCGGACAGATATCTGACACTTGTTCCGG GACATGAATTTGGCGGCAAAGGGAAGATTATGGTGCGAGAGACCAACAATAACTCGGCCGGTCTCCGCGATTCGG TGACGGGGAAGGATGTGCGATCAGACATTGCATCGCCATCATCATCGTGA |