Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4978.t1
Gene name
Locationscaffold_026:327815..328740
Strand-
Gene length (bp)925
Transcript length (bp)642
Coding sequence length (bp)642
Protein length (aa) 214

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04438 zf-HIT HIT zinc finger 5.3E-09 27 54

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 57 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4978.t1
MDRATSQLDRRAVGTRFGWDAGDKMPGTCEVCVSEPSKYRCPTCGLMSCSLACTQSHKIYCAPKAPSPKPTGPTV
DIQQPPGELNEHAASEITPKAQNGLDIKALGSSTELKDLLDRFPSLREELYDIYKTTLEDAWVETQRFGGRGRHH
GRGKGPHRHNGPWTREKGFNRGVGRVRRLRERCEEGLETGKKAEGYVRFMSLVTGNELPRETM*
Coding >Ani_SJS100_1|g4978.t1
ATGGACCGCGCCACTTCACAGCTTGATCGTCGCGCAGTTGGCACAAGGTTTGGATGGGACGCTGGCGATAAAATG
CCCGGCACTTGCGAGGTTTGCGTCTCGGAGCCTTCGAAGTACCGATGCCCAACATGTGGGCTCATGAGTTGCTCT
CTGGCTTGCACCCAGTCCCATAAAATCTACTGCGCACCTAAAGCACCATCGCCAAAACCGACCGGTCCAACGGTC
GACATCCAACAGCCTCCCGGCGAATTGAATGAGCATGCGGCCAGCGAGATAACACCTAAAGCTCAGAATGGCCTC
GATATTAAAGCCTTAGGAAGCTCAACCGAACTCAAAGATTTACTCGATCGGTTCCCTTCGCTTCGTGAGGAGCTG
TACGATATCTACAAGACTACTTTGGAAGATGCATGGGTGGAGACACAACGCTTTGGAGGTCGGGGTCGACATCAC
GGGAGAGGCAAAGGGCCGCACCGTCATAATGGACCGTGGACCCGTGAGAAGGGCTTCAACCGGGGAGTGGGAAGG
GTGAGGAGGCTACGGGAAAGATGCGAGGAGGGCCTGGAGACTGGAAAAAAAGCGGAGGGATACGTGCGCTTCATG
TCCCTGGTCACTGGTAATGAGCTTCCACGCGAGACCATGTGA
Transcript >Ani_SJS100_1|g4978.t1
ATGGACCGCGCCACTTCACAGCTTGATCGTCGCGCAGTTGGCACAAGGTTTGGATGGGACGCTGGCGATAAAATG
CCCGGCACTTGCGAGGTTTGCGTCTCGGAGCCTTCGAAGTACCGATGCCCAACATGTGGGCTCATGAGTTGCTCT
CTGGCTTGCACCCAGTCCCATAAAATCTACTGCGCACCTAAAGCACCATCGCCAAAACCGACCGGTCCAACGGTC
GACATCCAACAGCCTCCCGGCGAATTGAATGAGCATGCGGCCAGCGAGATAACACCTAAAGCTCAGAATGGCCTC
GATATTAAAGCCTTAGGAAGCTCAACCGAACTCAAAGATTTACTCGATCGGTTCCCTTCGCTTCGTGAGGAGCTG
TACGATATCTACAAGACTACTTTGGAAGATGCATGGGTGGAGACACAACGCTTTGGAGGTCGGGGTCGACATCAC
GGGAGAGGCAAAGGGCCGCACCGTCATAATGGACCGTGGACCCGTGAGAAGGGCTTCAACCGGGGAGTGGGAAGG
GTGAGGAGGCTACGGGAAAGATGCGAGGAGGGCCTGGAGACTGGAAAAAAAGCGGAGGGATACGTGCGCTTCATG
TCCCTGGTCACTGGTAATGAGCTTCCACGCGAGACCATGTGA
Gene >Ani_SJS100_1|g4978.t1
ATGGACCGCGCCACTTCACGTGAGCCCCCATTGGGCTGAGTTTGTTTCTTTTCGGTCCGCTAGACGATCATCCCT
GACAGTTCCTTATCGGCAGTCATTCTTTTATCGTCACTTTTCCTTCGCAGAAGCCTTGAATTTTGCAGGACACAA
GGTAACTATCCTTGTCCACACGCCAACGCGCTCGCTTCATACGACCCTTGCGACCGGCCGAAGCAAGACAATGTT
CTACAGAGCTTGATCGTCGCGCAGTTGGCACAAGGTTTGGATGGGACGCTGGCGATAAAATGCCCGGCACTTGCG
AGGTTTGCGTCTCGGAGCCTTCGAAGTACCGATGCCCAACATGTGGGCTCATGAGGTATGATTGTGCTCTAAGCC
TTTTCTTTTGAGAAGGGAGGAACATACCCGTGCTAATTGCCACCCTCCTAGTTGCTCTCTGGCTTGCACCCAGTC
CCATAAAATCTACTGCGCACCTAAAGCACCATCGCCAAAACCGACCGGTCCAACGGTCGACATCCAACAGCCTCC
CGGCGAATTGAATGAGCATGCGGCCAGCGAGATAACACCTAAAGCTCAGAATGGCCTCGATATTAAAGCCTTAGG
AAGCTCAACCGAACTCAAAGATTTACTCGATCGGTTCCCTTCGCTTCGTGAGGAGCTGTACGATATCTACAAGAC
TACTTTGGAAGATGCATGGGTGGAGACACAACGCTTTGGAGGTCGGGGTCGACATCACGGGAGAGGCAAAGGGCC
GCACCGTCATAATGGACCGTGGACCCGTGAGAAGGGCTTCAACCGGGGAGTGGGAAGGGTGAGGAGGCTACGGGA
AAGATGCGAGGAGGGCCTGGAGACTGGAAAAAAAGCGGAGGGATACGTGCGCTTCATGTCCCTGGTCACTGGTAA
TGAGCTTCCACGCGAGACCATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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