Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4964.t1
Gene name
Locationscaffold_026:292461..293721
Strand+
Gene length (bp)1260
Transcript length (bp)1191
Coding sequence length (bp)1191
Protein length (aa) 397

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05022 SRP40_C SRP40, C-terminal domain 9.0E-18 340 394

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4964.t1
MAGQKSKQAKPAKASKSKETPAPPAQLVAALSAFLSESGFSKTKEAFTKELASKSIDSDAKNVPSLLELYQSWEK
SSEKSSGSSSSDSDSDSESESGSESDSESSDSSSDESSDSDVEMNDKSESDSDSDSDDEEEKKKPAAPAAKSQGT
KRKAESSSSESDSESEADEAPKSKKTKVTSAMEESSDSDSSDSESDSSSSSSESEESSDSDSSSDDSSSSSSESD
SDSDSDSDSDSSSDDEDDKKDDKKADKKALKAATKTPLPPSESSSSGSSPSSSSDSDTTGTVSNSDSAPKEQSKS
AQTSYSSSASPAPGNGPQKKKHTGARPTPLAQLSELPTDHLLSNDYVPYAYAEKAWQDLSVTRGKGFTKEKNKKK
RGSYRGGPIDISGGKSFKFDD*
Coding >Ani_SJS100_1|g4964.t1
ATGGCCGGTCAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAGCAAGGAGACTCCTGCTCCTCCCGCT
CAACTTGTCGCCGCTCTCAGTGCTTTCTTGAGCGAATCTGGTTTCTCCAAGACCAAGGAAGCTTTCACCAAAGAA
CTTGCCAGCAAGTCGATCGACTCTGATGCGAAGAATGTGCCGTCCCTGCTTGAACTGTACCAATCCTGGGAAAAG
TCCTCCGAGAAGTCCTCCGGTTCTAGCTCTTCGGACAGCGACAGCGACAGTGAAAGTGAGAGTGGAAGCGAGAGC
GATAGCGAAAGCAGTGACAGCAGCTCCGACGAATCCAGCGATTCTGATGTCGAGATGAACGACAAGTCCGAGTCC
GACAGCGATAGCGACTCCGATGACGAGGAGGAGAAGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCCCAGGGCACC
AAGCGCAAGGCCGAGTCCAGCTCCTCCGAGTCTGATTCCGAATCTGAGGCCGATGAGGCTCCCAAGTCGAAGAAG
ACCAAGGTGACTTCCGCCATGGAAGAGTCTTCTGACTCGGACTCCTCCGACTCTGAGTCCGATTCTTCCTCTTCC
TCTTCCGAGTCTGAAGAGTCCTCCGACTCGGACTCCTCCAGCGACGACTCCTCCAGCTCCTCTTCTGAGTCCGAT
TCCGACTCCGATTCTGATTCGGACTCTGACTCTTCCTCTGACGACGAGGACGACAAGAAGGACGACAAGAAGGCC
GATAAGAAGGCACTGAAGGCTGCTACCAAGACCCCTCTGCCTCCGTCCGAATCTAGCTCCAGCGGCTCTTCCCCG
TCTTCTTCGTCCGACTCTGACACCACCGGAACCGTCAGCAACTCCGACTCTGCCCCCAAAGAGCAGTCCAAGTCT
GCCCAGACATCCTACTCCAGCAGCGCCAGCCCTGCTCCCGGCAACGGCCCCCAGAAGAAGAAGCACACCGGTGCT
CGCCCCACTCCTCTGGCTCAGCTGAGTGAGCTCCCCACCGACCACCTCCTCTCGAACGACTACGTTCCCTACGCC
TACGCCGAGAAGGCCTGGCAGGATCTGTCGGTCACCCGCGGCAAGGGCTTCACCAAGGAGAAGAACAAGAAGAAG
CGCGGTTCTTACCGCGGTGGTCCCATCGACATCTCGGGTGGCAAGTCCTTCAAGTTCGATGACTAG
Transcript >Ani_SJS100_1|g4964.t1
ATGGCCGGTCAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAGCAAGGAGACTCCTGCTCCTCCCGCT
CAACTTGTCGCCGCTCTCAGTGCTTTCTTGAGCGAATCTGGTTTCTCCAAGACCAAGGAAGCTTTCACCAAAGAA
CTTGCCAGCAAGTCGATCGACTCTGATGCGAAGAATGTGCCGTCCCTGCTTGAACTGTACCAATCCTGGGAAAAG
TCCTCCGAGAAGTCCTCCGGTTCTAGCTCTTCGGACAGCGACAGCGACAGTGAAAGTGAGAGTGGAAGCGAGAGC
GATAGCGAAAGCAGTGACAGCAGCTCCGACGAATCCAGCGATTCTGATGTCGAGATGAACGACAAGTCCGAGTCC
GACAGCGATAGCGACTCCGATGACGAGGAGGAGAAGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCCCAGGGCACC
AAGCGCAAGGCCGAGTCCAGCTCCTCCGAGTCTGATTCCGAATCTGAGGCCGATGAGGCTCCCAAGTCGAAGAAG
ACCAAGGTGACTTCCGCCATGGAAGAGTCTTCTGACTCGGACTCCTCCGACTCTGAGTCCGATTCTTCCTCTTCC
TCTTCCGAGTCTGAAGAGTCCTCCGACTCGGACTCCTCCAGCGACGACTCCTCCAGCTCCTCTTCTGAGTCCGAT
TCCGACTCCGATTCTGATTCGGACTCTGACTCTTCCTCTGACGACGAGGACGACAAGAAGGACGACAAGAAGGCC
GATAAGAAGGCACTGAAGGCTGCTACCAAGACCCCTCTGCCTCCGTCCGAATCTAGCTCCAGCGGCTCTTCCCCG
TCTTCTTCGTCCGACTCTGACACCACCGGAACCGTCAGCAACTCCGACTCTGCCCCCAAAGAGCAGTCCAAGTCT
GCCCAGACATCCTACTCCAGCAGCGCCAGCCCTGCTCCCGGCAACGGCCCCCAGAAGAAGAAGCACACCGGTGCT
CGCCCCACTCCTCTGGCTCAGCTGAGTGAGCTCCCCACCGACCACCTCCTCTCGAACGACTACGTTCCCTACGCC
TACGCCGAGAAGGCCTGGCAGGATCTGTCGGTCACCCGCGGCAAGGGCTTCACCAAGGAGAAGAACAAGAAGAAG
CGCGGTTCTTACCGCGGTGGTCCCATCGACATCTCGGGTGGCAAGTCCTTCAAGTTCGATGACTAG
Gene >Ani_SJS100_1|g4964.t1
ATGGCCGGTCAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAGCAAGGAGACTGTAAGGCAATCCGAC
CGACCTGTTTGTTGTATAGATAGGCAATACTGATCAAGTTCATGAATTAACCAGCCTGCTCCTCCCGCTCAACTT
GTCGCCGCTCTCAGTGCTTTCTTGAGCGAATCTGGTTTCTCCAAGACCAAGGAAGCTTTCACCAAAGAACTTGCC
AGCAAGTCGATCGACTCTGATGCGAAGAATGTGCCGTCCCTGCTTGAACTGTACCAATCCTGGGAAAAGTCCTCC
GAGAAGTCCTCCGGTTCTAGCTCTTCGGACAGCGACAGCGACAGTGAAAGTGAGAGTGGAAGCGAGAGCGATAGC
GAAAGCAGTGACAGCAGCTCCGACGAATCCAGCGATTCTGATGTCGAGATGAACGACAAGTCCGAGTCCGACAGC
GATAGCGACTCCGATGACGAGGAGGAGAAGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCCCAGGGCACCAAGCGC
AAGGCCGAGTCCAGCTCCTCCGAGTCTGATTCCGAATCTGAGGCCGATGAGGCTCCCAAGTCGAAGAAGACCAAG
GTGACTTCCGCCATGGAAGAGTCTTCTGACTCGGACTCCTCCGACTCTGAGTCCGATTCTTCCTCTTCCTCTTCC
GAGTCTGAAGAGTCCTCCGACTCGGACTCCTCCAGCGACGACTCCTCCAGCTCCTCTTCTGAGTCCGATTCCGAC
TCCGATTCTGATTCGGACTCTGACTCTTCCTCTGACGACGAGGACGACAAGAAGGACGACAAGAAGGCCGATAAG
AAGGCACTGAAGGCTGCTACCAAGACCCCTCTGCCTCCGTCCGAATCTAGCTCCAGCGGCTCTTCCCCGTCTTCT
TCGTCCGACTCTGACACCACCGGAACCGTCAGCAACTCCGACTCTGCCCCCAAAGAGCAGTCCAAGTCTGCCCAG
ACATCCTACTCCAGCAGCGCCAGCCCTGCTCCCGGCAACGGCCCCCAGAAGAAGAAGCACACCGGTGCTCGCCCC
ACTCCTCTGGCTCAGCTGAGTGAGCTCCCCACCGACCACCTCCTCTCGAACGACTACGTTCCCTACGCCTACGCC
GAGAAGGCCTGGCAGGATCTGTCGGTCACCCGCGGCAAGGGCTTCACCAAGGAGAAGAACAAGAAGAAGCGCGGT
TCTTACCGCGGTGGTCCCATCGACATCTCGGGTGGCAAGTCCTTCAAGTTCGATGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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