Protein ID | Ani_SJS100_1|g4964.t1 |
Gene name | |
Location | scaffold_026:292461..293721 |
Strand | + |
Gene length (bp) | 1260 |
Transcript length (bp) | 1191 |
Coding sequence length (bp) | 1191 |
Protein length (aa) | 397 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05022 | SRP40_C | SRP40, C-terminal domain | 9.0E-18 | 340 | 394 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 42 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4964.t1 MAGQKSKQAKPAKASKSKETPAPPAQLVAALSAFLSESGFSKTKEAFTKELASKSIDSDAKNVPSLLELYQSWEK SSEKSSGSSSSDSDSDSESESGSESDSESSDSSSDESSDSDVEMNDKSESDSDSDSDDEEEKKKPAAPAAKSQGT KRKAESSSSESDSESEADEAPKSKKTKVTSAMEESSDSDSSDSESDSSSSSSESEESSDSDSSSDDSSSSSSESD SDSDSDSDSDSSSDDEDDKKDDKKADKKALKAATKTPLPPSESSSSGSSPSSSSDSDTTGTVSNSDSAPKEQSKS AQTSYSSSASPAPGNGPQKKKHTGARPTPLAQLSELPTDHLLSNDYVPYAYAEKAWQDLSVTRGKGFTKEKNKKK RGSYRGGPIDISGGKSFKFDD* |
Coding | >Ani_SJS100_1|g4964.t1 ATGGCCGGTCAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAGCAAGGAGACTCCTGCTCCTCCCGCT CAACTTGTCGCCGCTCTCAGTGCTTTCTTGAGCGAATCTGGTTTCTCCAAGACCAAGGAAGCTTTCACCAAAGAA CTTGCCAGCAAGTCGATCGACTCTGATGCGAAGAATGTGCCGTCCCTGCTTGAACTGTACCAATCCTGGGAAAAG TCCTCCGAGAAGTCCTCCGGTTCTAGCTCTTCGGACAGCGACAGCGACAGTGAAAGTGAGAGTGGAAGCGAGAGC GATAGCGAAAGCAGTGACAGCAGCTCCGACGAATCCAGCGATTCTGATGTCGAGATGAACGACAAGTCCGAGTCC GACAGCGATAGCGACTCCGATGACGAGGAGGAGAAGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCCCAGGGCACC AAGCGCAAGGCCGAGTCCAGCTCCTCCGAGTCTGATTCCGAATCTGAGGCCGATGAGGCTCCCAAGTCGAAGAAG ACCAAGGTGACTTCCGCCATGGAAGAGTCTTCTGACTCGGACTCCTCCGACTCTGAGTCCGATTCTTCCTCTTCC TCTTCCGAGTCTGAAGAGTCCTCCGACTCGGACTCCTCCAGCGACGACTCCTCCAGCTCCTCTTCTGAGTCCGAT TCCGACTCCGATTCTGATTCGGACTCTGACTCTTCCTCTGACGACGAGGACGACAAGAAGGACGACAAGAAGGCC GATAAGAAGGCACTGAAGGCTGCTACCAAGACCCCTCTGCCTCCGTCCGAATCTAGCTCCAGCGGCTCTTCCCCG TCTTCTTCGTCCGACTCTGACACCACCGGAACCGTCAGCAACTCCGACTCTGCCCCCAAAGAGCAGTCCAAGTCT GCCCAGACATCCTACTCCAGCAGCGCCAGCCCTGCTCCCGGCAACGGCCCCCAGAAGAAGAAGCACACCGGTGCT CGCCCCACTCCTCTGGCTCAGCTGAGTGAGCTCCCCACCGACCACCTCCTCTCGAACGACTACGTTCCCTACGCC TACGCCGAGAAGGCCTGGCAGGATCTGTCGGTCACCCGCGGCAAGGGCTTCACCAAGGAGAAGAACAAGAAGAAG CGCGGTTCTTACCGCGGTGGTCCCATCGACATCTCGGGTGGCAAGTCCTTCAAGTTCGATGACTAG |
Transcript | >Ani_SJS100_1|g4964.t1 ATGGCCGGTCAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAGCAAGGAGACTCCTGCTCCTCCCGCT CAACTTGTCGCCGCTCTCAGTGCTTTCTTGAGCGAATCTGGTTTCTCCAAGACCAAGGAAGCTTTCACCAAAGAA CTTGCCAGCAAGTCGATCGACTCTGATGCGAAGAATGTGCCGTCCCTGCTTGAACTGTACCAATCCTGGGAAAAG TCCTCCGAGAAGTCCTCCGGTTCTAGCTCTTCGGACAGCGACAGCGACAGTGAAAGTGAGAGTGGAAGCGAGAGC GATAGCGAAAGCAGTGACAGCAGCTCCGACGAATCCAGCGATTCTGATGTCGAGATGAACGACAAGTCCGAGTCC GACAGCGATAGCGACTCCGATGACGAGGAGGAGAAGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCCCAGGGCACC AAGCGCAAGGCCGAGTCCAGCTCCTCCGAGTCTGATTCCGAATCTGAGGCCGATGAGGCTCCCAAGTCGAAGAAG ACCAAGGTGACTTCCGCCATGGAAGAGTCTTCTGACTCGGACTCCTCCGACTCTGAGTCCGATTCTTCCTCTTCC TCTTCCGAGTCTGAAGAGTCCTCCGACTCGGACTCCTCCAGCGACGACTCCTCCAGCTCCTCTTCTGAGTCCGAT TCCGACTCCGATTCTGATTCGGACTCTGACTCTTCCTCTGACGACGAGGACGACAAGAAGGACGACAAGAAGGCC GATAAGAAGGCACTGAAGGCTGCTACCAAGACCCCTCTGCCTCCGTCCGAATCTAGCTCCAGCGGCTCTTCCCCG TCTTCTTCGTCCGACTCTGACACCACCGGAACCGTCAGCAACTCCGACTCTGCCCCCAAAGAGCAGTCCAAGTCT GCCCAGACATCCTACTCCAGCAGCGCCAGCCCTGCTCCCGGCAACGGCCCCCAGAAGAAGAAGCACACCGGTGCT CGCCCCACTCCTCTGGCTCAGCTGAGTGAGCTCCCCACCGACCACCTCCTCTCGAACGACTACGTTCCCTACGCC TACGCCGAGAAGGCCTGGCAGGATCTGTCGGTCACCCGCGGCAAGGGCTTCACCAAGGAGAAGAACAAGAAGAAG CGCGGTTCTTACCGCGGTGGTCCCATCGACATCTCGGGTGGCAAGTCCTTCAAGTTCGATGACTAG |
Gene | >Ani_SJS100_1|g4964.t1 ATGGCCGGTCAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAGCAAGGAGACTGTAAGGCAATCCGAC CGACCTGTTTGTTGTATAGATAGGCAATACTGATCAAGTTCATGAATTAACCAGCCTGCTCCTCCCGCTCAACTT GTCGCCGCTCTCAGTGCTTTCTTGAGCGAATCTGGTTTCTCCAAGACCAAGGAAGCTTTCACCAAAGAACTTGCC AGCAAGTCGATCGACTCTGATGCGAAGAATGTGCCGTCCCTGCTTGAACTGTACCAATCCTGGGAAAAGTCCTCC GAGAAGTCCTCCGGTTCTAGCTCTTCGGACAGCGACAGCGACAGTGAAAGTGAGAGTGGAAGCGAGAGCGATAGC GAAAGCAGTGACAGCAGCTCCGACGAATCCAGCGATTCTGATGTCGAGATGAACGACAAGTCCGAGTCCGACAGC GATAGCGACTCCGATGACGAGGAGGAGAAGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCCCAGGGCACCAAGCGC AAGGCCGAGTCCAGCTCCTCCGAGTCTGATTCCGAATCTGAGGCCGATGAGGCTCCCAAGTCGAAGAAGACCAAG GTGACTTCCGCCATGGAAGAGTCTTCTGACTCGGACTCCTCCGACTCTGAGTCCGATTCTTCCTCTTCCTCTTCC GAGTCTGAAGAGTCCTCCGACTCGGACTCCTCCAGCGACGACTCCTCCAGCTCCTCTTCTGAGTCCGATTCCGAC TCCGATTCTGATTCGGACTCTGACTCTTCCTCTGACGACGAGGACGACAAGAAGGACGACAAGAAGGCCGATAAG AAGGCACTGAAGGCTGCTACCAAGACCCCTCTGCCTCCGTCCGAATCTAGCTCCAGCGGCTCTTCCCCGTCTTCT TCGTCCGACTCTGACACCACCGGAACCGTCAGCAACTCCGACTCTGCCCCCAAAGAGCAGTCCAAGTCTGCCCAG ACATCCTACTCCAGCAGCGCCAGCCCTGCTCCCGGCAACGGCCCCCAGAAGAAGAAGCACACCGGTGCTCGCCCC ACTCCTCTGGCTCAGCTGAGTGAGCTCCCCACCGACCACCTCCTCTCGAACGACTACGTTCCCTACGCCTACGCC GAGAAGGCCTGGCAGGATCTGTCGGTCACCCGCGGCAAGGGCTTCACCAAGGAGAAGAACAAGAAGAAGCGCGGT TCTTACCGCGGTGGTCCCATCGACATCTCGGGTGGCAAGTCCTTCAAGTTCGATGACTAG |