Protein ID | Ani_SJS100_1|g4957.t1 |
Gene name | |
Location | scaffold_026:268013..268676 |
Strand | + |
Gene length (bp) | 663 |
Transcript length (bp) | 663 |
Coding sequence length (bp) | 663 |
Protein length (aa) | 221 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10615 | DUF2470 | Domain of unknown function (DUF2470) | 3.9E-18 | 10 | 81 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 104 | 121 | 17 |
2 | 180 | 202 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 5238 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4957.t1 MAPDRSNISFTITHMNANHQDSLAAYLQVYCHVSAREAKSARLEDISLSDLVISANGTRYTVPIDPAMGSFSESR SRLVAMHQECLARLGRSDITIKEYRRPEGIEIFLFFVFATALVAFSRRSNFLPGSLFYETVGLGAVPPLAQLFYK TQPFVLTVMAGSHVVEASLFTVKRLKRHGVPVLSLVWCAWVVSNLIEGYTVWRRFDRVVRQEGAKREHGK* |
Coding | >Ani_SJS100_1|g4957.t1 ATGGCACCAGACCGCTCCAACATCTCCTTCACCATCACCCACATGAACGCCAACCACCAAGACTCCCTAGCAGCC TATCTCCAAGTCTACTGCCACGTCTCCGCCCGCGAAGCCAAATCCGCTCGTCTCGAAGACATCAGCTTATCTGAT CTAGTCATCAGCGCCAATGGCACACGCTACACTGTCCCCATCGATCCAGCAATGGGAAGTTTCTCCGAGTCGCGA TCCCGCCTGGTAGCCATGCACCAGGAATGTCTTGCGCGACTGGGCCGGTCCGACATCACCATCAAAGAGTATCGT CGGCCAGAGGGGATCGAGATCTTCCTCTTTTTCGTGTTTGCAACTGCATTGGTGGCGTTCTCTCGGCGCAGTAAC TTCCTGCCTGGGTCGCTGTTCTACGAAACGGTTGGACTGGGTGCGGTTCCGCCACTGGCGCAACTGTTTTACAAG ACACAGCCGTTTGTGCTTACGGTTATGGCCGGGTCGCATGTGGTGGAGGCGAGTTTGTTCACGGTGAAGAGGTTG AAGCGGCATGGGGTGCCGGTATTGTCGTTGGTGTGGTGCGCTTGGGTGGTGTCAAATTTGATTGAGGGGTATACG GTGTGGAGGAGGTTTGATCGGGTGGTGAGGCAGGAAGGGGCGAAGAGGGAGCATGGGAAATAG |
Transcript | >Ani_SJS100_1|g4957.t1 ATGGCACCAGACCGCTCCAACATCTCCTTCACCATCACCCACATGAACGCCAACCACCAAGACTCCCTAGCAGCC TATCTCCAAGTCTACTGCCACGTCTCCGCCCGCGAAGCCAAATCCGCTCGTCTCGAAGACATCAGCTTATCTGAT CTAGTCATCAGCGCCAATGGCACACGCTACACTGTCCCCATCGATCCAGCAATGGGAAGTTTCTCCGAGTCGCGA TCCCGCCTGGTAGCCATGCACCAGGAATGTCTTGCGCGACTGGGCCGGTCCGACATCACCATCAAAGAGTATCGT CGGCCAGAGGGGATCGAGATCTTCCTCTTTTTCGTGTTTGCAACTGCATTGGTGGCGTTCTCTCGGCGCAGTAAC TTCCTGCCTGGGTCGCTGTTCTACGAAACGGTTGGACTGGGTGCGGTTCCGCCACTGGCGCAACTGTTTTACAAG ACACAGCCGTTTGTGCTTACGGTTATGGCCGGGTCGCATGTGGTGGAGGCGAGTTTGTTCACGGTGAAGAGGTTG AAGCGGCATGGGGTGCCGGTATTGTCGTTGGTGTGGTGCGCTTGGGTGGTGTCAAATTTGATTGAGGGGTATACG GTGTGGAGGAGGTTTGATCGGGTGGTGAGGCAGGAAGGGGCGAAGAGGGAGCATGGGAAATAG |
Gene | >Ani_SJS100_1|g4957.t1 ATGGCACCAGACCGCTCCAACATCTCCTTCACCATCACCCACATGAACGCCAACCACCAAGACTCCCTAGCAGCC TATCTCCAAGTCTACTGCCACGTCTCCGCCCGCGAAGCCAAATCCGCTCGTCTCGAAGACATCAGCTTATCTGAT CTAGTCATCAGCGCCAATGGCACACGCTACACTGTCCCCATCGATCCAGCAATGGGAAGTTTCTCCGAGTCGCGA TCCCGCCTGGTAGCCATGCACCAGGAATGTCTTGCGCGACTGGGCCGGTCCGACATCACCATCAAAGAGTATCGT CGGCCAGAGGGGATCGAGATCTTCCTCTTTTTCGTGTTTGCAACTGCATTGGTGGCGTTCTCTCGGCGCAGTAAC TTCCTGCCTGGGTCGCTGTTCTACGAAACGGTTGGACTGGGTGCGGTTCCGCCACTGGCGCAACTGTTTTACAAG ACACAGCCGTTTGTGCTTACGGTTATGGCCGGGTCGCATGTGGTGGAGGCGAGTTTGTTCACGGTGAAGAGGTTG AAGCGGCATGGGGTGCCGGTATTGTCGTTGGTGTGGTGCGCTTGGGTGGTGTCAAATTTGATTGAGGGGTATACG GTGTGGAGGAGGTTTGATCGGGTGGTGAGGCAGGAAGGGGCGAAGAGGGAGCATGGGAAATAG |