© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g4912.t1 |
| Gene name | |
| Location | scaffold_026:144287..145216 |
| Strand | + |
| Gene length (bp) | 929 |
| Transcript length (bp) | 684 |
| Coding sequence length (bp) | 684 |
| Protein length (aa) | 228 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 29 | 51 | 22 |
| 2 | 63 | 81 | 18 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4912.t1 MCDPAKALWDTSLLSKGASCRSSWILVDYAIFTGAISAFTDLYLAIYPTVILLKLHMSMRKRLALCAALGLSAVA CAMAIIKCMQLPGLADLSDTTSDATADLVIWTSIESNVVILASCIPTLQPLLEIILGKRSLRSTGGYQYKESSTQ LPESNKWSSKRSGHRKSKGNMMIADIGSQDSILQIGDDHEDESHYMGHIRRTDKITVVYESVTPQPGGGDKTNDP VK* |
| Coding | >Ani_SJS100_1|g4912.t1 ATGTGCGATCCAGCGAAAGCTCTTTGGGACACGTCCCTTCTGTCAAAGGGCGCGAGTTGCCGGAGCTCGTGGATC CTTGTGGACTATGCCATCTTCACTGGAGCCATATCTGCCTTTACGGATCTGTATTTGGCAATTTATCCGACAGTC ATCTTACTAAAGCTTCATATGTCGATGCGGAAACGATTGGCGTTGTGTGCAGCGCTGGGTCTGAGTGCAGTCGCT TGTGCAATGGCAATCATCAAGTGCATGCAGCTACCAGGTCTTGCCGATCTCAGCGATACGACATCAGATGCCACG GCCGACCTTGTGATATGGACAAGTATCGAATCAAACGTCGTGATCCTAGCCTCATGTATCCCCACGCTACAACCG CTTCTCGAAATAATTCTCGGAAAGCGCAGTCTGAGAAGTACCGGCGGATATCAGTACAAAGAGAGCAGTACCCAA TTGCCCGAGTCTAACAAGTGGAGCAGCAAGCGATCTGGACACCGGAAAAGTAAAGGCAATATGATGATTGCAGAC ATTGGCAGCCAGGATAGCATCTTGCAGATAGGTGATGATCACGAGGACGAAAGCCATTATATGGGGCACATCCGT CGTACAGATAAAATCACTGTTGTGTACGAAAGTGTGACACCACAGCCAGGTGGTGGTGATAAAACAAATGACCCT GTAAAATAG |
| Transcript | >Ani_SJS100_1|g4912.t1 ATGTGCGATCCAGCGAAAGCTCTTTGGGACACGTCCCTTCTGTCAAAGGGCGCGAGTTGCCGGAGCTCGTGGATC CTTGTGGACTATGCCATCTTCACTGGAGCCATATCTGCCTTTACGGATCTGTATTTGGCAATTTATCCGACAGTC ATCTTACTAAAGCTTCATATGTCGATGCGGAAACGATTGGCGTTGTGTGCAGCGCTGGGTCTGAGTGCAGTCGCT TGTGCAATGGCAATCATCAAGTGCATGCAGCTACCAGGTCTTGCCGATCTCAGCGATACGACATCAGATGCCACG GCCGACCTTGTGATATGGACAAGTATCGAATCAAACGTCGTGATCCTAGCCTCATGTATCCCCACGCTACAACCG CTTCTCGAAATAATTCTCGGAAAGCGCAGTCTGAGAAGTACCGGCGGATATCAGTACAAAGAGAGCAGTACCCAA TTGCCCGAGTCTAACAAGTGGAGCAGCAAGCGATCTGGACACCGGAAAAGTAAAGGCAATATGATGATTGCAGAC ATTGGCAGCCAGGATAGCATCTTGCAGATAGGTGATGATCACGAGGACGAAAGCCATTATATGGGGCACATCCGT CGTACAGATAAAATCACTGTTGTGTACGAAAGTGTGACACCACAGCCAGGTGGTGGTGATAAAACAAATGACCCT GTAAAATAG |
| Gene | >Ani_SJS100_1|g4912.t1 ATGTGCGATCCAGCGAAAGCTCTTTGGGACACGTCCCTTCTGTCAAAGGGCGCGAGTTGCCGGAGCTCGTGGATC CTTGTGGACTATGCCATCTTCACTGGAGGTATGTGCGAGTATGATTCAATAGAAAGATAAGTCTAGCTTAAACAA CGATAGCCATATCTGCCTTTACGGATCTGTATTTGGCAATTTATCCGACAGTCATCTTACTAAAGCTTCATATGT CGATGCGGAAACGATTGGCGTTGTGTGCAGCGCTGGGTCTGAGTGCAGTGTAAGCAAGAACTCAAGAAGCTCATC GTCATCAGTATTAGCTAAGAAACAAGGCTATAGCGCTTGTGCAATGGCAATCATCAAGTGCATGCAGCTACCAGG TCTTGCCGATCTCAGCGATACGACATGTGAGTTGTTCTTGATGCAAAACTGTACTAAGGCCGGATGTTCACTGAC ACTATAGCAGATGCCACGGCCGACCTTGTGATATGGACAAGGTAAGCCACCATGTGTTACTTCGTGACACCAAGC CCTTATTGAGCAGCAATTCCGGATATTGACAATCTCCCGGCAGTATCGAATCAAACGTCGTGATCCTAGCCTCAT GTATCCCCACGCTACAACCGCTTCTCGAAATAATTCTCGGAAAGCGCAGTCTGAGAAGTACCGGCGGATATCAGT ACAAAGAGAGCAGTACCCAATTGCCCGAGTCTAACAAGTGGAGCAGCAAGCGATCTGGACACCGGAAAAGTAAAG GCAATATGATGATTGCAGACATTGGCAGCCAGGATAGCATCTTGCAGATAGGTGATGATCACGAGGACGAAAGCC ATTATATGGGGCACATCCGTCGTACAGATAAAATCACTGTTGTGTACGAAAGTGTGACACCACAGCCAGGTGGTG GTGATAAAACAAATGACCCTGTAAAATAG |