Protein ID | Ani_SJS100_1|g4905.t1 |
Gene name | |
Location | scaffold_026:105464..107996 |
Strand | - |
Gene length (bp) | 2532 |
Transcript length (bp) | 2361 |
Coding sequence length (bp) | 2361 |
Protein length (aa) | 787 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03707 | MHYT | Bacterial signalling protein N terminal repeat | 3.0E-10 | 64 | 118 |
PF03707 | MHYT | Bacterial signalling protein N terminal repeat | 1.3E-07 | 133 | 184 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 33 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
2 | 50 | 72 | 22 |
3 | 87 | 109 | 22 |
4 | 121 | 143 | 22 |
5 | 158 | 180 | 22 |
6 | 193 | 215 | 22 |
7 | 235 | 257 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4905.t1 MLLTDRAPHGDHVNVSYMGGFIFLAYVVSVMGCTTTLELLHRRTSRSGLYNWYLLLTSSITMGGVGIWCMHYIGN RAIVLGNGEAQFQIIYSMTFTGVSFVLPVVVLLVAFYSIGASEKAGYIRILTGGVLTGGAVCGMHYIGQLGISNY RCSYRVANIVGATIIAVFASTVALTVFFRWRATWTDSWWRRGICGCVLALAVSGMHWTAAVGTYYYNHDTTMKHN GQLSRSQVVIISSVLACAACGVLTACAVVAGGNRRRLNIQARQLVLTCAFFDQSGRIMVTPHALLPSRKIVDRYV GRTFNDDDLTRSHPAFLWAFRASRHWNLVKDVVPFMRSRIETDKEATEHFLAKGEALDQENELQNDFDELFKRHF CVTAQDLADEVRQPLPALGKLYDDVLVTTAPTSRFSRAMGYSRLNNSKGQMLFTVRHLDKQEANRLAAAGFRFTA VENVTSVLSSRMHIPLPVLGEHLKDMRDYATGGRNYEPGVHLVSFVMRPTISDHFEVLTAKGTGNPLPSSTLPIK RINIQHLDLISHMEGWTISTCLSWLKSEAAQSNKEIDDFREQLIHAMTSLESALPPDINMASKFSARPLIAPCRM FSDSDASNSILLPFCAVGNLDTQVSNPDFTFMPLRLFRAQQQLNDANIGSDGFAKELGRELYYSNARSSSATEAD ITPSIRSVLKLWPRKHADSPHGDLSQETLTELSQLGDIMVRKEVKVDVAKLSTRSLDSAKHASHATVVAGDLATS SYVDELYNLCYSPGVRLRPDTAITRSSVTRSSMATG* |
Coding | >Ani_SJS100_1|g4905.t1 ATGTTGCTCACGGACAGGGCTCCCCACGGGGACCATGTCAATGTGTCTTACATGGGTGGTTTCATCTTCCTGGCT TACGTAGTCAGTGTGATGGGATGTACCACCACTCTGGAGCTTCTGCACCGACGGACGTCGAGGTCTGGCCTGTAC AACTGGTATCTATTGCTCACTTCCTCCATAACAATGGGCGGTGTCGGTATTTGGTGCATGCATTACATTGGAAAC CGTGCCATTGTCCTGGGAAACGGGGAAGCACAATTTCAGATCATTTATAGCATGACGTTTACGGGCGTATCCTTT GTGCTCCCGGTTGTCGTTCTGCTTGTTGCCTTCTACAGCATAGGAGCCAGCGAGAAAGCCGGTTATATCCGAATC CTGACGGGTGGTGTACTCACAGGAGGTGCAGTATGCGGTATGCATTATATCGGTCAGCTCGGTATCAGCAACTAT CGCTGTAGCTACCGTGTTGCAAACATCGTCGGTGCCACCATCATCGCGGTGTTTGCTAGTACTGTTGCGTTGACG GTCTTCTTTCGGTGGAGGGCTACATGGACAGATAGTTGGTGGCGACGCGGTATTTGCGGTTGTGTACTTGCCCTT GCTGTCTCCGGCATGCATTGGACTGCTGCAGTTGGCACATACTACTACAATCATGACACAACCATGAAGCATAAT GGTCAGCTTTCGCGGAGCCAAGTTGTCATTATCAGTTCTGTTTTGGCATGCGCTGCTTGCGGAGTTTTGACGGCG TGTGCCGTAGTTGCTGGTGGAAATCGGAGAAGACTGAACATACAAGCTCGACAGCTCGTCTTGACTTGTGCCTTC TTTGACCAGTCTGGGCGGATCATGGTCACTCCTCACGCGTTGCTTCCTAGCCGGAAGATTGTCGATCGTTATGTT GGCAGGACGTTCAACGATGACGACCTTACCCGGAGCCATCCCGCTTTCCTTTGGGCATTCCGAGCGAGTAGACAC TGGAATCTGGTCAAGGATGTTGTCCCTTTTATGAGAAGTCGGATCGAGACAGACAAAGAGGCGACGGAGCACTTT CTTGCCAAGGGTGAGGCCCTGGATCAGGAGAATGAATTGCAGAACGATTTCGACGAACTCTTCAAGCGACATTTT TGCGTTACCGCTCAGGACCTCGCCGACGAGGTTCGACAGCCTCTGCCGGCCCTCGGAAAGCTATACGACGATGTA CTGGTTACGACTGCTCCGACATCGCGCTTCTCTCGGGCGATGGGATATTCTCGGTTAAACAATAGCAAGGGACAA ATGCTTTTCACAGTGCGCCATTTGGACAAGCAGGAAGCGAATCGACTGGCCGCCGCAGGTTTCCGTTTCACTGCG GTCGAAAATGTCACATCGGTTTTGTCCAGCCGAATGCACATTCCATTGCCTGTGTTGGGCGAGCATCTAAAAGAC ATGCGAGATTACGCGACTGGAGGCCGCAATTACGAGCCGGGCGTCCACCTCGTTTCATTTGTTATGCGCCCTACC ATTTCCGACCACTTTGAGGTACTAACAGCGAAGGGGACCGGTAACCCATTGCCTTCATCAACATTACCGATTAAA CGAATTAACATTCAGCACCTCGATCTGATTTCACACATGGAAGGATGGACCATATCGACCTGCTTGTCTTGGCTG AAATCTGAAGCAGCCCAGTCGAACAAAGAGATCGATGACTTCCGCGAGCAACTGATCCATGCGATGACATCGCTT GAAAGCGCACTTCCTCCCGATATCAACATGGCCTCGAAATTCTCAGCCAGACCTCTCATTGCCCCTTGCCGGATG TTCTCTGATTCTGATGCATCAAACTCTATCCTACTGCCATTCTGCGCTGTTGGAAATCTGGATACTCAAGTCTCG AACCCGGACTTCACCTTCATGCCCCTACGCCTCTTCCGCGCACAGCAACAACTGAACGACGCAAACATCGGAAGT GATGGATTTGCGAAGGAGCTGGGCAGGGAACTGTACTATTCAAACGCACGCAGCAGCTCCGCCACGGAAGCCGAT ATCACACCTTCCATCCGTTCTGTTCTGAAACTTTGGCCGCGCAAGCATGCGGATTCCCCCCATGGCGATCTCTCC CAGGAAACGTTGACGGAGCTCTCACAGCTTGGCGATATTATGGTCCGCAAGGAGGTCAAGGTGGATGTCGCCAAG CTATCTACGCGATCACTGGACTCTGCCAAACATGCTTCGCACGCCACCGTTGTAGCCGGTGATTTGGCTACCAGC AGTTATGTGGATGAACTCTATAATCTTTGTTACTCACCTGGTGTTCGCTTGCGGCCAGATACAGCCATTACTCGG AGCTCAGTGACCCGGAGTTCAATGGCCACGGGATGA |
Transcript | >Ani_SJS100_1|g4905.t1 ATGTTGCTCACGGACAGGGCTCCCCACGGGGACCATGTCAATGTGTCTTACATGGGTGGTTTCATCTTCCTGGCT TACGTAGTCAGTGTGATGGGATGTACCACCACTCTGGAGCTTCTGCACCGACGGACGTCGAGGTCTGGCCTGTAC AACTGGTATCTATTGCTCACTTCCTCCATAACAATGGGCGGTGTCGGTATTTGGTGCATGCATTACATTGGAAAC CGTGCCATTGTCCTGGGAAACGGGGAAGCACAATTTCAGATCATTTATAGCATGACGTTTACGGGCGTATCCTTT GTGCTCCCGGTTGTCGTTCTGCTTGTTGCCTTCTACAGCATAGGAGCCAGCGAGAAAGCCGGTTATATCCGAATC CTGACGGGTGGTGTACTCACAGGAGGTGCAGTATGCGGTATGCATTATATCGGTCAGCTCGGTATCAGCAACTAT CGCTGTAGCTACCGTGTTGCAAACATCGTCGGTGCCACCATCATCGCGGTGTTTGCTAGTACTGTTGCGTTGACG GTCTTCTTTCGGTGGAGGGCTACATGGACAGATAGTTGGTGGCGACGCGGTATTTGCGGTTGTGTACTTGCCCTT GCTGTCTCCGGCATGCATTGGACTGCTGCAGTTGGCACATACTACTACAATCATGACACAACCATGAAGCATAAT GGTCAGCTTTCGCGGAGCCAAGTTGTCATTATCAGTTCTGTTTTGGCATGCGCTGCTTGCGGAGTTTTGACGGCG TGTGCCGTAGTTGCTGGTGGAAATCGGAGAAGACTGAACATACAAGCTCGACAGCTCGTCTTGACTTGTGCCTTC TTTGACCAGTCTGGGCGGATCATGGTCACTCCTCACGCGTTGCTTCCTAGCCGGAAGATTGTCGATCGTTATGTT GGCAGGACGTTCAACGATGACGACCTTACCCGGAGCCATCCCGCTTTCCTTTGGGCATTCCGAGCGAGTAGACAC TGGAATCTGGTCAAGGATGTTGTCCCTTTTATGAGAAGTCGGATCGAGACAGACAAAGAGGCGACGGAGCACTTT CTTGCCAAGGGTGAGGCCCTGGATCAGGAGAATGAATTGCAGAACGATTTCGACGAACTCTTCAAGCGACATTTT TGCGTTACCGCTCAGGACCTCGCCGACGAGGTTCGACAGCCTCTGCCGGCCCTCGGAAAGCTATACGACGATGTA CTGGTTACGACTGCTCCGACATCGCGCTTCTCTCGGGCGATGGGATATTCTCGGTTAAACAATAGCAAGGGACAA ATGCTTTTCACAGTGCGCCATTTGGACAAGCAGGAAGCGAATCGACTGGCCGCCGCAGGTTTCCGTTTCACTGCG GTCGAAAATGTCACATCGGTTTTGTCCAGCCGAATGCACATTCCATTGCCTGTGTTGGGCGAGCATCTAAAAGAC ATGCGAGATTACGCGACTGGAGGCCGCAATTACGAGCCGGGCGTCCACCTCGTTTCATTTGTTATGCGCCCTACC ATTTCCGACCACTTTGAGGTACTAACAGCGAAGGGGACCGGTAACCCATTGCCTTCATCAACATTACCGATTAAA CGAATTAACATTCAGCACCTCGATCTGATTTCACACATGGAAGGATGGACCATATCGACCTGCTTGTCTTGGCTG AAATCTGAAGCAGCCCAGTCGAACAAAGAGATCGATGACTTCCGCGAGCAACTGATCCATGCGATGACATCGCTT GAAAGCGCACTTCCTCCCGATATCAACATGGCCTCGAAATTCTCAGCCAGACCTCTCATTGCCCCTTGCCGGATG TTCTCTGATTCTGATGCATCAAACTCTATCCTACTGCCATTCTGCGCTGTTGGAAATCTGGATACTCAAGTCTCG AACCCGGACTTCACCTTCATGCCCCTACGCCTCTTCCGCGCACAGCAACAACTGAACGACGCAAACATCGGAAGT GATGGATTTGCGAAGGAGCTGGGCAGGGAACTGTACTATTCAAACGCACGCAGCAGCTCCGCCACGGAAGCCGAT ATCACACCTTCCATCCGTTCTGTTCTGAAACTTTGGCCGCGCAAGCATGCGGATTCCCCCCATGGCGATCTCTCC CAGGAAACGTTGACGGAGCTCTCACAGCTTGGCGATATTATGGTCCGCAAGGAGGTCAAGGTGGATGTCGCCAAG CTATCTACGCGATCACTGGACTCTGCCAAACATGCTTCGCACGCCACCGTTGTAGCCGGTGATTTGGCTACCAGC AGTTATGTGGATGAACTCTATAATCTTTGTTACTCACCTGGTGTTCGCTTGCGGCCAGATACAGCCATTACTCGG AGCTCAGTGACCCGGAGTTCAATGGCCACGGGATGA |
Gene | >Ani_SJS100_1|g4905.t1 ATGTTGCTCACGGACAGGGCTCCCCACGGGGACCATGTCAATGTGTCTTACATGGGTGGTTTCATCTTCCTGGCT TACGTAGTCAGTGTGATGGGATGTACCACCACTCTGGAGCTTCTGCACCGACGGACGTCGAGGTCTGGCCTGTAC AACTGGTACGATATCTTCACTGCATGATAACAACAAGCGCCTGTCTAACCGTACATATAGGTATCTATTGCTCAC TTCCTCCATAACAATGGGCGGTGTCGGTATTTGGTGCATGCATTACATTGGAAACCGTGCCATTGTCCTGGGAAA CGGGGAAGCACAATTTCAGATCATTTATAGCATGACGTTTACGGGCGTATCCTTTGTGCTCCCGGTTGTCGTTCT GCTTGTTGCCTTCTACAGCATAGGAGCCAGCGAGAAAGCCGGTTATATCCGAATCCTGACGGGTGGTGTACTCAC AGGAGGTGCAGTATGCGGTATGCATTATATCGGTCAGCTCGGTATCAGCAACTATCGCTGTAGCTACCGTGTTGC AAACATCGTCGGTGCCACCATCATCGCGGTGTTTGCTAGTACTGTTGCGTTGACGGTCTTCTTTCGGTGGAGGGC TACATGGACAGATAGTTGGTGGCGACGCGGTATTTGCGGTTGTGTACTTGCCCTTGCTGTCTCCGGCATGCATTG GACTGCTGCAGTTGGCACATACTACTACAATCATGACACAACCATGAAGCATAATGGTCAGCTTTCGCGGAGCCA AGTTGTCATTATCAGTTCTGTTTTGGTATGTTTGAAGTCCAGGGTTACCTGATGTGGCGGATGTTAACGGATGTT AGGCATGCGCTGCTTGCGGAGTTTTGACGGCGTGTGCCGTAGTTGCTGGTGGAAATCGGAGAAGACTGAACATAC AAGCTCGACAGCTCGTCTTGACTTGTGCCTTCTTTGACCAGTCTGGGCGGATCATGGTCACTCCTCACGCGTTGC TTCCTAGCCGGAAGATTGTCGATCGTTATGTTGGCAGGGTATGTTTGCAATCTAATTCATTCCCGAACTGTGCTG ATGCAGAATCTTCCCCCAACTATATAGACGTTCAACGATGACGACCTTACCCGGAGCCATCCCGCTTTCCTTTGG GCATTCCGAGCGAGTAGACACTGGAATCTGGTCAAGGATGTTGTCCCTTTTATGAGAAGTCGGATCGAGACAGAC AAAGAGGCGACGGAGCACTTTCTTGCCAAGGGTGAGGCCCTGGATCAGGAGAATGAATTGCAGAACGATTTCGAC GAACTCTTCAAGCGACATTTTTGCGTTACCGCTCAGGACCTCGCCGACGAGGTTCGACAGCCTCTGCCGGCCCTC GGAAAGCTATACGACGATGTACTGGTTACGACTGCTCCGACATCGCGCTTCTCTCGGGCGATGGGATATTCTCGG TTAAACAATAGCAAGGGACAAATGCTTTTCACAGTGCGCCATTTGGACAAGCAGGAAGCGAATCGACTGGCCGCC GCAGGTTTCCGTTTCACTGCGGTCGAAAATGTCACATCGGTTTTGTCCAGCCGAATGCACATTCCATTGCCTGTG TTGGGCGAGCATCTAAAAGACATGCGAGATTACGCGACTGGAGGCCGCAATTACGAGCCGGGCGTCCACCTCGTT TCATTTGTTATGCGCCCTACCATTTCCGACCACTTTGAGGTACTAACAGCGAAGGGGACCGGTAACCCATTGCCT TCATCAACATTACCGATTAAACGAATTAACATTCAGCACCTCGATCTGATTTCACACATGGAAGGATGGACCATA TCGACCTGCTTGTCTTGGCTGAAATCTGAAGCAGCCCAGTCGAACAAAGAGATCGATGACTTCCGCGAGCAACTG ATCCATGCGATGACATCGCTTGAAAGCGCACTTCCTCCCGATATCAACATGGCCTCGAAATTCTCAGCCAGACCT CTCATTGCCCCTTGCCGGATGTTCTCTGATTCTGATGCATCAAACTCTATCCTACTGCCATTCTGCGCTGTTGGA AATCTGGATACTCAAGTCTCGAACCCGGACTTCACCTTCATGCCCCTACGCCTCTTCCGCGCACAGCAACAACTG AACGACGCAAACATCGGAAGTGATGGATTTGCGAAGGAGCTGGGCAGGGAACTGTACTATTCAAACGCACGCAGC AGCTCCGCCACGGAAGCCGATATCACACCTTCCATCCGTTCTGTTCTGAAACTTTGGCCGCGCAAGCATGCGGAT TCCCCCCATGGCGATCTCTCCCAGGAAACGTTGACGGAGCTCTCACAGCTTGGCGATATTATGGTCCGCAAGGAG GTCAAGGTGGATGTCGCCAAGCTATCTACGCGATCACTGGACTCTGCCAAACATGCTTCGCACGCCACCGTTGTA GCCGGTGATTTGGCTACCAGCAGTTATGTGGATGAACTCTATAATCTTTGTTACTCACCTGGTGTTCGCTTGCGG CCAGATACAGCCATTACTCGGAGCTCAGTGACCCGGAGTTCAATGGCCACGGGATGA |