Protein ID | Ani_SJS100_1|g4899.t1 |
Gene name | |
Location | scaffold_026:86133..87559 |
Strand | + |
Gene length (bp) | 1426 |
Transcript length (bp) | 1131 |
Coding sequence length (bp) | 1131 |
Protein length (aa) | 377 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 65 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 61 | 83 | 22 |
3 | 103 | 125 | 22 |
4 | 138 | 160 | 22 |
5 | 180 | 202 | 22 |
6 | 214 | 236 | 22 |
7 | 251 | 273 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4899.t1 MLDEMMGGMLLPRTTDDGTARGQRALVVTAVLTGLSIVIVAMRMYARVGLMKLTGREDYMILISLVLSCTYLGLV AAEVHFGLGKHDADLSDVVVKEQLKRLWAAIPFYNASLIFTKFSILFQYLRIFPDRRFRLACWIVFGIVATYGTW AVVSGFLNCVPVAKFWNRNISGYCLSFEAVWFFNASMNIATDTTLLILPMPLLSQLQLPRMQKFALMGVFAIGGL VVITSILRLSSLRSVAKSTDTSYSNVGAAYWTAAECNVAIICACLPFLRPIVSRIFPRFLSTNSYNRYTRNPTMT ASRMTATRMTARSHRQKVELYSQDRDYGMYTIDVKSGEASHDSALDGIAVTTTTMIQETSRNNDESTSQRRLVVD V* |
Coding | >Ani_SJS100_1|g4899.t1 ATGCTGGATGAAATGATGGGAGGCATGCTGCTTCCCCGGACTACGGATGATGGTACAGCTCGCGGACAGCGAGCC CTGGTAGTGACAGCCGTGCTTACCGGACTCTCAATTGTCATTGTCGCTATGCGTATGTATGCGCGAGTTGGGTTA ATGAAATTGACTGGTCGTGAAGATTATATGATTCTTATTTCTCTGGTATTATCATGCACGTACCTCGGTCTTGTT GCTGCTGAGGTGCATTTTGGACTCGGAAAACATGACGCCGATTTGTCTGACGTTGTTGTGAAAGAGCAATTGAAG CGACTCTGGGCCGCTATCCCTTTCTATAATGCCAGCTTGATCTTTACCAAATTTTCCATTCTTTTCCAGTATCTT CGGATCTTCCCCGACCGCCGCTTCCGGCTTGCCTGCTGGATCGTGTTTGGTATCGTGGCTACTTACGGAACATGG GCAGTAGTCAGTGGTTTCTTGAACTGTGTCCCAGTCGCCAAATTCTGGAACCGCAACATCTCCGGCTACTGCCTA AGTTTCGAGGCCGTCTGGTTCTTCAACGCATCGATGAATATCGCTACAGACACAACCCTGTTAATCTTGCCTATG CCTCTTCTGTCGCAATTACAACTCCCGCGCATGCAAAAATTCGCTCTTATGGGTGTCTTTGCTATTGGTGGACTC GTCGTGATCACGAGTATCCTCCGTCTATCCAGTCTGAGAAGCGTAGCTAAAAGCACAGACACGTCTTACAGTAAT GTTGGCGCTGCCTATTGGACCGCTGCAGAATGCAACGTCGCCATCATCTGCGCCTGCCTACCATTCCTTCGTCCA ATCGTCAGTCGCATCTTCCCTCGTTTCCTCTCGACCAACAGCTACAACCGCTACACTCGCAACCCCACCATGACA GCCAGTCGCATGACCGCCACTCGGATGACCGCGCGCTCGCACCGGCAAAAGGTCGAGCTTTACTCCCAGGACCGC GACTACGGCATGTACACCATCGACGTCAAGTCCGGCGAAGCGAGCCACGATAGTGCGCTAGACGGAATCGCGGTC ACGACGACAACGATGATTCAGGAGACATCGAGAAACAATGACGAGTCGACCAGTCAGCGTCGATTGGTTGTTGAT GTCTGA |
Transcript | >Ani_SJS100_1|g4899.t1 ATGCTGGATGAAATGATGGGAGGCATGCTGCTTCCCCGGACTACGGATGATGGTACAGCTCGCGGACAGCGAGCC CTGGTAGTGACAGCCGTGCTTACCGGACTCTCAATTGTCATTGTCGCTATGCGTATGTATGCGCGAGTTGGGTTA ATGAAATTGACTGGTCGTGAAGATTATATGATTCTTATTTCTCTGGTATTATCATGCACGTACCTCGGTCTTGTT GCTGCTGAGGTGCATTTTGGACTCGGAAAACATGACGCCGATTTGTCTGACGTTGTTGTGAAAGAGCAATTGAAG CGACTCTGGGCCGCTATCCCTTTCTATAATGCCAGCTTGATCTTTACCAAATTTTCCATTCTTTTCCAGTATCTT CGGATCTTCCCCGACCGCCGCTTCCGGCTTGCCTGCTGGATCGTGTTTGGTATCGTGGCTACTTACGGAACATGG GCAGTAGTCAGTGGTTTCTTGAACTGTGTCCCAGTCGCCAAATTCTGGAACCGCAACATCTCCGGCTACTGCCTA AGTTTCGAGGCCGTCTGGTTCTTCAACGCATCGATGAATATCGCTACAGACACAACCCTGTTAATCTTGCCTATG CCTCTTCTGTCGCAATTACAACTCCCGCGCATGCAAAAATTCGCTCTTATGGGTGTCTTTGCTATTGGTGGACTC GTCGTGATCACGAGTATCCTCCGTCTATCCAGTCTGAGAAGCGTAGCTAAAAGCACAGACACGTCTTACAGTAAT GTTGGCGCTGCCTATTGGACCGCTGCAGAATGCAACGTCGCCATCATCTGCGCCTGCCTACCATTCCTTCGTCCA ATCGTCAGTCGCATCTTCCCTCGTTTCCTCTCGACCAACAGCTACAACCGCTACACTCGCAACCCCACCATGACA GCCAGTCGCATGACCGCCACTCGGATGACCGCGCGCTCGCACCGGCAAAAGGTCGAGCTTTACTCCCAGGACCGC GACTACGGCATGTACACCATCGACGTCAAGTCCGGCGAAGCGAGCCACGATAGTGCGCTAGACGGAATCGCGGTC ACGACGACAACGATGATTCAGGAGACATCGAGAAACAATGACGAGTCGACCAGTCAGCGTCGATTGGTTGTTGAT GTCTGA |
Gene | >Ani_SJS100_1|g4899.t1 ATGCTGGATGAAATGATGGGAGGCATGCTGCTTCCCCGGACTACGGATGATGGTACAGCTCGCGGACAGCGAGCC CTGGTAGTGACAGCCGTGCTTACCGGACTCTCAATTGTCATTGTCGCTATGCGTATGTATGCGCGAGTTGGGTTA ATGAAATTGACTGGTCGTGAAGATTATATGATTCTTATTTCTCTGGTACGTACCCTGATTGGGGTGTCTGAGTTC TCGCTGGGAAAGTGCCGTACATTGACATTGGTTGCATGTAGGTATTATCATGCACGTACCTCGGTCTTGTTGCTG CTGGTAAGTCGTGGCCATCCGCCAGTGACCTAAAATATCTCTCTTACATGCTCCAGAGGTGCATTTTGGACTCGG AAAACATGACGCCGATTTGTCTGACGTTGTTGTGAAAGAGCAATTGAAGGTAACATTCCCCAACACTAATCAGTT TTGAACCTATACTGATCCTCTGTAATGAAGCGACTCTGGGCCGCTATCCCTTTCTATAATGCCAGCTTGATCTTT ACCAAATTTTCCATTCTTTTCCAGTATCTTCGGATCTTCCCCGACCGCCGCTTCCGGCTTGCCTGCTGGATCGTG TTTGGTATCGTGGCTACTTACGGAACATGGGCAGTAGTCAGTGGTTTCTTGAACTGTGTCCCAGTCGCCAAATTC TGGAACCGCAACATCTCCGGCTACTGCCTAAGTTTCGAGGCCGTCTGGTTCTTCAACGCATCGATGAATATCGCT ACAGACACAACCCTGTTAATCTTGCCTATGCCTCTTCTGTCGCAATTACAACTCCCGCGCATGCAAAAATTCGCT CTTATGGGTGTCTTTGCTATTGGTGGACTGTAAGTCATGGCGATCGCCAGTTTGTCCAATGCACGCTAACCACCA CACTCCAGCGTCGTGATCACGAGTATCCTCCGTCTATCCAGTCTGAGAAGCGTAGCTAAAAGCACAGACACGTCT TGTACGCAGCCCCCATTCAATTTCTTTTCTCCTCCTCGAGTTTAGACTAACAAACGAACCAGACAGTAATGTTGG CGCTGCCTATTGGACCGCTGCAGAATGCAACGTCGCCATCATCTGCGCCTGCCTACCATTCCTTCGTCCAATCGT CAGTCGCATCTTCCCTCGTTTCCTCTCGACCAACAGCTACAACCGCTACACTCGCAACCCCACCATGACAGCCAG TCGCATGACCGCCACTCGGATGACCGCGCGCTCGCACCGGCAAAAGGTCGAGCTTTACTCCCAGGACCGCGACTA CGGCATGTACACCATCGACGTCAAGTCCGGCGAAGCGAGCCACGATAGTGCGCTAGACGGAATCGCGGTCACGAC GACAACGATGATTCAGGAGACATCGAGAAACAATGACGAGTCGACCAGTCAGCGTCGATTGGTTGTTGATGTCTG A |