Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4887.t1
Gene name
Locationscaffold_026:42128..42420
Strand-
Gene length (bp)292
Transcript length (bp)243
Coding sequence length (bp)243
Protein length (aa) 81

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 2 24 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4887.t1
MSFLFLLFMVFFAPFLLLLAYLGFSKFIAPRLRTYFSASPAGPGLDSYGRHYLRSMVNTGSAMSEQIELQNMLDD
SDHEE*
Coding >Ani_SJS100_1|g4887.t1
ATGAGCTTCTTGTTCCTACTTTTTATGGTGTTCTTTGCACCCTTTCTGCTACTCTTAGCATATCTAGGCTTCTCG
AAATTCATCGCACCTCGTCTTCGGACTTATTTCTCAGCATCACCTGCCGGACCTGGACTTGACTCATATGGGAGA
CACTACCTCCGATCAATGGTCAACACTGGGTCCGCTATGTCCGAGCAGATCGAGCTGCAGAATATGTTGGACGAT
TCGGATCACGAGGAGTGA
Transcript >Ani_SJS100_1|g4887.t1
ATGAGCTTCTTGTTCCTACTTTTTATGGTGTTCTTTGCACCCTTTCTGCTACTCTTAGCATATCTAGGCTTCTCG
AAATTCATCGCACCTCGTCTTCGGACTTATTTCTCAGCATCACCTGCCGGACCTGGACTTGACTCATATGGGAGA
CACTACCTCCGATCAATGGTCAACACTGGGTCCGCTATGTCCGAGCAGATCGAGCTGCAGAATATGTTGGACGAT
TCGGATCACGAGGAGTGA
Gene >Ani_SJS100_1|g4887.t1
ATGAGCTTCTTGTTCCTACTTTTTATGGTGTTCTTTGCACCCTTTCTGCTACTCTTAGGTACCACCGGCTCGCCC
ATCTCCACTGACAAGCCGCTGACAGCTCGAAGCATATCTAGGCTTCTCGAAATTCATCGCACCTCGTCTTCGGAC
TTATTTCTCAGCATCACCTGCCGGACCTGGACTTGACTCATATGGGAGACACTACCTCCGATCAATGGTCAACAC
TGGGTCCGCTATGTCCGAGCAGATCGAGCTGCAGAATATGTTGGACGATTCGGATCACGAGGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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