Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4882.t1
Gene name
Locationscaffold_026:36354..37294
Strand+
Gene length (bp)940
Transcript length (bp)750
Coding sequence length (bp)750
Protein length (aa) 250

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00117 GATase Glutamine amidotransferase class-I 5.9E-12 67 203

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4882.t1
MPPLRIAILECDTPVEKVNNKYGGYRGVFSLLLRESAAALGQPDKLDPETGLEFSGWDVVTAQEYPNLEDVDAIV
LSGSKHDSFEDHPWILKLVEFTKKAFEDKRVKIFAICFGHQILARALGARVGRNTAGWELAVCEVDLTETGKELF
GRDKLRIHQMHQDIAYGYPSEVISLGASPRCAVQGMYVPGKLISVQGHPEFREDIMTEILTLRTAAGIFSKEQSE
DAFNRAGIPHDGIAITMAFLKLLI*
Coding >Ani_SJS100_1|g4882.t1
ATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACACCCCAGTCGAAAAAGTAAACAACAAATATGGAGGCTAT
CGCGGCGTATTCTCACTCCTGCTGCGTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTAGACCCAGAAACC
GGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCAAGAGTACCCCAACCTGGAGGATGTAGACGCAATTGTT
TTGTCCGGGTCAAAACACGATTCCTTTGAGGACCACCCTTGGATCCTCAAGCTGGTTGAATTCACCAAAAAAGCT
TTCGAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCAGATCCTGGCACGTGCGCTTGGCGCCAGA
GTTGGTCGCAACACTGCAGGATGGGAACTTGCAGTGTGTGAGGTGGACTTGACTGAGACGGGGAAGGAGTTGTTC
GGGAGGGATAAGCTTCGCATTCATCAAATGCACCAGGATATTGCGTACGGGTACCCATCCGAGGTCATCTCCCTG
GGCGCTTCCCCGAGGTGTGCAGTACAGGGCATGTATGTCCCTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAA
TTCAGAGAAGACATCATGACCGAGATCCTTACTTTGCGGACTGCGGCTGGTATCTTCTCGAAAGAACAATCAGAA
GATGCCTTTAATCGCGCAGGCATCCCACACGACGGCATTGCGATTACCATGGCCTTCTTGAAGCTTCTGATTTGA
Transcript >Ani_SJS100_1|g4882.t1
ATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACACCCCAGTCGAAAAAGTAAACAACAAATATGGAGGCTAT
CGCGGCGTATTCTCACTCCTGCTGCGTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTAGACCCAGAAACC
GGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCAAGAGTACCCCAACCTGGAGGATGTAGACGCAATTGTT
TTGTCCGGGTCAAAACACGATTCCTTTGAGGACCACCCTTGGATCCTCAAGCTGGTTGAATTCACCAAAAAAGCT
TTCGAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCAGATCCTGGCACGTGCGCTTGGCGCCAGA
GTTGGTCGCAACACTGCAGGATGGGAACTTGCAGTGTGTGAGGTGGACTTGACTGAGACGGGGAAGGAGTTGTTC
GGGAGGGATAAGCTTCGCATTCATCAAATGCACCAGGATATTGCGTACGGGTACCCATCCGAGGTCATCTCCCTG
GGCGCTTCCCCGAGGTGTGCAGTACAGGGCATGTATGTCCCTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAA
TTCAGAGAAGACATCATGACCGAGATCCTTACTTTGCGGACTGCGGCTGGTATCTTCTCGAAAGAACAATCAGAA
GATGCCTTTAATCGCGCAGGCATCCCACACGACGGCATTGCGATTACCATGGCCTTCTTGAAGCTTCTGATTTGA
Gene >Ani_SJS100_1|g4882.t1
ATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACACCCCAGTCGAAAAAGTAAACAACAAATATGGAGGCTAT
CGCGGCGTATTCTCACTCCTGCTGCGTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTAGACCCAGAAACC
GGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCAAGAGTACCCCAACCTGGAGGATGTAGACGCAATTGTT
TTGTCCGGGTCAAGTGAGTTAGCTACCTACCCTTCGTGCTCTTCCTTAATTCCCGCGCACCGTGCAGCATGCACT
TCCTCTGCAAGGCGCGCCCTGTGACTCACATTGTCTCCTAGAACACGATTCCTTTGAGGACCACCCTTGGATCCT
CAAGCTGGTTGAATTCACCAAAAAAGCTTTCGAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCA
GATCCTGGCACGTGCGCTTGGCGCCAGAGTTGGTCGCAACACTGCAGGATGGGAACTTGCAGTGTGTGAGGTGGA
CTTGACTGAGACGGGGAAGGAGTTGTTCGGGAGGGATAAGCTTGTATGTCTACCATCCTTCTCTCCGTCACCAGG
GCATGCATATAGCTTTTATGTGTATGGGTTCTATGCTGACAAAGTATGTTTACAGCGCATTCATCAAATGCACCA
GGATATTGCGTACGGGTACCCATCCGAGGTCATCTCCCTGGGCGCTTCCCCGAGGTGTGCAGTACAGGGCATGTA
TGTCCCTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAATTCAGAGAAGACATCATGACCGAGATCCTTACTTT
GCGGACTGCGGCTGGTATCTTCTCGAAAGAACAATCAGAAGATGCCTTTAATCGCGCAGGCATCCCACACGACGG
CATTGCGATTACCATGGCCTTCTTGAAGCTTCTGATTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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