Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4868.t1
Gene name
Locationscaffold_025:404843..405342
Strand+
Gene length (bp)499
Transcript length (bp)393
Coding sequence length (bp)393
Protein length (aa) 131

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999752

Transmembrane Domains

Domain # Start End Length
1 4 26 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup10187
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g10500.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g9502.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g268.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g4832.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g5713.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g5411.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g10886.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g7301.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g2660.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g10668.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g6168.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g8311.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g10696.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g4314.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g727.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g10754.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g10677.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g10640.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g4868.t1 (this protein)
Aspergillus niger CBS 147371 Ani_SJS27_1|g10714.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g1947.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g9758.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g6342.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4868.t1
MYNLVGFPALLCLVLAVAPVLSAPVAAGDGAIVRRQSHHLNTNTQSGSNMGFSIPDGPSFNSGQYASNRFREDRG
GDDDDEGSSESSNTNAGNGMNIGIPGGPSINMGNYFSNNYEETEEVHDDPSTSAS*
Coding >Ani_SJS100_1|g4868.t1
ATGTACAACCTCGTGGGCTTTCCGGCACTGCTATGCCTCGTGCTGGCTGTGGCTCCCGTTCTGTCTGCACCTGTC
GCTGCGGGAGATGGAGCCATTGTGCGAAGACAGAGCCACCATCTCAATACCAACACTCAGTCCGGCTCTAACATG
GGCTTCTCGATCCCTGATGGTCCATCCTTCAACTCTGGCCAGTATGCCTCCAACAGATTTCGTGAAGACCGTGGG
GGCGACGATGATGATGAGGGCTCAAGCGAGTCCAGCAACACCAACGCAGGCAATGGGATGAATATCGGCATCCCG
GGTGGTCCCAGCATCAACATGGGCAACTACTTCAGTAACAACTATGAGGAGACTGAAGAAGTCCACGACGACCCT
TCCACTTCCGCCAGTTAA
Transcript >Ani_SJS100_1|g4868.t1
ATGTACAACCTCGTGGGCTTTCCGGCACTGCTATGCCTCGTGCTGGCTGTGGCTCCCGTTCTGTCTGCACCTGTC
GCTGCGGGAGATGGAGCCATTGTGCGAAGACAGAGCCACCATCTCAATACCAACACTCAGTCCGGCTCTAACATG
GGCTTCTCGATCCCTGATGGTCCATCCTTCAACTCTGGCCAGTATGCCTCCAACAGATTTCGTGAAGACCGTGGG
GGCGACGATGATGATGAGGGCTCAAGCGAGTCCAGCAACACCAACGCAGGCAATGGGATGAATATCGGCATCCCG
GGTGGTCCCAGCATCAACATGGGCAACTACTTCAGTAACAACTATGAGGAGACTGAAGAAGTCCACGACGACCCT
TCCACTTCCGCCAGTTAA
Gene >Ani_SJS100_1|g4868.t1
ATGTACAACCTCGTGGGCTTTCCGGCACTGCTATGCCTCGTGCTGGCTGTGGCTCCCGTTCTGTCTGCACCTGTC
GCTGCGGGAGTATGTTAAAATTCAATCTCAATCTCAAATAAAAGCATCAACGAAGCTGACACATGCTGCAGGATG
GAGCCATTGTGCGAAGACAGAGCCACCATCTCAATACCAACACTCAGTCCGGCTCTAACATGGGCTTCTCGATCC
CTGATGGTCCATCCTTCAACTCTGGCCAGTATGCCTCCAACAGATTTCGTGAAGACCGTGGGGGCGACGATGATG
ATGAGGGCTCAAGCGAGTCCAGCAACACCAACGCAGGCAATGGGATGAATATCGGCATCCCGGGTGGTCCCAGCA
TCAACATGGGCAACTACTTCAGTAACAACTATGAGGAGACTGAAGAGTCACGACCAAACCCTTCAACTACTTCCA
CTACGACTATCCCAGAGTCCACGACGACCCTTCCACTTCCGCCAGTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail