Protein ID | Ani_SJS100_1|g4853.t1 |
Gene name | |
Location | scaffold_025:359274..361785 |
Strand | - |
Gene length (bp) | 2511 |
Transcript length (bp) | 2352 |
Coding sequence length (bp) | 2352 |
Protein length (aa) | 784 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08324 | PUL | PUL domain | 4.3E-74 | 501 | 777 |
PF09070 | PFU | PFU (PLAA family ubiquitin binding) | 7.1E-45 | 350 | 460 |
PF00400 | WD40 | WD domain, G-beta repeat | 8.0E-04 | 7 | 41 |
PF00400 | WD40 | WD domain, G-beta repeat | 1.1E-05 | 106 | 137 |
PF00400 | WD40 | WD domain, G-beta repeat | 1.1E-01 | 146 | 178 |
PF00400 | WD40 | WD domain, G-beta repeat | 2.3E-06 | 226 | 263 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
Orthofinder run ID | 3 |
Orthogroup | 5136 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4853.t1 MPEFKISASLEGHGDDVRAVAFPNPNAIFSASRDATVRLWKLVSTPPPAYDYTITSHGQAFINALAYYPPTPQFP DGLVLSGGQDTIIEARQPGKAADDNADAMLLGHTHNVCALDVSHDGGWVVSGSWDSTARLWKVGKWETDVVLEGH QGSVWTVLAYDKDTVITGCADKIIRIFNTSGTLLRTIENSQDVVRALCKVPASNPTGAHFASASNDGVIRLFTIQ GQLVGEMHGHESFIYSLAALPSGELVSSGEDRTVRVWDGTQCVQTITHPAISVWSVAVCKETGDIVTGASDRITR VFSRSQERVASPEVVQQFEKTVKESAIPEQQIGKINKDKLPGTEFLRQKSGTKDGQVQMIREADGSVTAHTWSAA SREWVAVGTVVDSAASSGRKTEYLGQDYDYVFDVDVEDGKPPLKLPYNVSQNPYEAATKFIQDNELSMNYLDQVA QFIVQNTQGATLGQTSQGPTPAGADPWGQERRYRPEDAQSPPAPEARPKVLPQKTYLSIKSANLKLIAKKLQELN QHVISSGSKDLSLSPSELETVATLCGQLESSNVEQSPAVEAGVVLLYKVATVWPVASRLPGLDLLRLSAAATPVT ATADYDGKDLISGIKSSGVFDSPFNVNNAMLSIRMLANLFETDAGRDLATSKFEQILSGVKSALTNSGTTPNRNL TIAITTLYINFAVYLTSAGRESMPESSEQALVLLGELTTLITGEKDSEAVYRGLVALGTLIKGLGEEVRTAAKEV YDVDDVLKKVSSSGLGKEPRIKGIIGEIKESLS* |
Coding | >Ani_SJS100_1|g4853.t1 ATGCCTGAGTTCAAGATCTCCGCTTCTTTGGAGGGCCACGGCGATGATGTTCGCGCCGTGGCCTTTCCGAATCCC AATGCTATATTTTCGGCGTCGCGAGATGCAACAGTCCGACTCTGGAAACTAGTCTCTACCCCACCTCCGGCATAT GACTACACCATCACCTCTCACGGCCAGGCCTTCATCAACGCTTTGGCATACTACCCACCTACCCCCCAGTTTCCC GATGGACTTGTCCTTTCCGGTGGTCAAGATACTATCATTGAAGCCAGACAACCAGGCAAAGCTGCCGACGATAAC GCGGATGCTATGCTCTTGGGCCATACACATAATGTCTGTGCGCTGGATGTGTCACATGATGGCGGATGGGTAGTC AGCGGAAGCTGGGACTCGACAGCTAGACTATGGAAAGTGGGTAAATGGGAAACCGATGTCGTGCTGGAGGGCCAT CAAGGAAGTGTTTGGACGGTGCTTGCCTATGACAAGGATACGGTCATCACAGGCTGCGCGGACAAAATAATACGT ATTTTTAACACCTCTGGCACACTGCTGAGAACAATCGAAAATTCACAGGACGTTGTGAGAGCTCTTTGCAAGGTT CCCGCTTCGAACCCCACCGGGGCGCACTTTGCTTCGGCGAGCAACGATGGAGTGATTCGTCTTTTTACCATACAA GGCCAACTCGTCGGGGAGATGCATGGCCACGAGAGCTTCATTTATTCTCTGGCCGCTTTGCCTTCGGGTGAGTTA GTCAGTTCCGGAGAAGATCGGACGGTGAGAGTCTGGGATGGTACGCAGTGCGTACAGACGATCACACACCCTGCG ATCTCTGTCTGGAGCGTCGCAGTATGCAAGGAGACCGGCGACATTGTTACAGGAGCCAGTGACCGAATCACACGC GTGTTTAGCAGGAGCCAGGAGCGCGTGGCAAGCCCAGAAGTAGTACAACAGTTCGAGAAGACTGTGAAGGAGTCG GCAATCCCAGAGCAGCAGATTGGGAAGATCAACAAAGATAAGCTTCCGGGTACGGAGTTTCTCAGGCAGAAATCC GGGACCAAGGACGGGCAGGTGCAGATGATCCGTGAGGCCGATGGTAGCGTTACTGCTCACACTTGGTCAGCGGCC TCACGGGAATGGGTTGCGGTTGGCACGGTAGTTGATTCCGCTGCCAGCAGTGGAAGGAAAACGGAGTATCTGGGT CAAGACTACGACTATGTCTTTGATGTCGACGTGGAAGACGGCAAACCCCCCCTCAAATTGCCATACAACGTCTCT CAAAACCCCTACGAGGCTGCGACCAAGTTTATCCAGGACAACGAACTGTCGATGAATTACCTTGATCAAGTTGCT CAGTTCATCGTTCAGAATACGCAAGGTGCGACTCTTGGTCAGACGTCTCAGGGGCCGACGCCCGCGGGGGCCGAT CCCTGGGGTCAAGAGAGGCGTTATCGTCCTGAAGATGCGCAGTCGCCCCCTGCTCCTGAGGCCCGACCGAAGGTC CTTCCGCAAAAAACATATCTTTCCATAAAATCTGCTAATCTTAAACTGATCGCTAAGAAGTTGCAAGAGCTGAAC CAACACGTCATATCCTCCGGATCGAAAGACCTGTCGCTCAGCCCTTCAGAGTTGGAGACGGTGGCAACCTTGTGT GGTCAGTTGGAGTCTTCGAATGTTGAGCAGTCTCCGGCAGTGGAGGCTGGTGTTGTTTTACTATACAAGGTCGCA ACCGTCTGGCCCGTCGCAAGCAGACTACCAGGTCTTGATCTTCTCCGCTTGTCCGCCGCTGCTACTCCCGTGACT GCCACTGCAGATTACGATGGCAAGGATCTCATCTCAGGGATTAAGTCTAGCGGGGTGTTCGATTCACCGTTCAAT GTCAATAATGCGATGCTGTCAATACGCATGCTCGCCAACCTTTTCGAAACGGATGCGGGACGTGACCTGGCCACT AGCAAGTTTGAGCAGATTCTGAGCGGCGTCAAGTCCGCTTTAACCAACAGTGGGACGACGCCGAACCGAAATCTC ACCATTGCCATTACAACACTCTACATCAACTTTGCCGTTTACCTGACCTCTGCGGGCAGAGAATCGATGCCTGAG TCATCGGAACAGGCTCTGGTGCTTCTCGGCGAGCTAACGACATTGATTACCGGTGAAAAGGACTCTGAAGCAGTC TACCGCGGCCTTGTGGCTCTAGGGACCTTGATCAAGGGACTAGGGGAAGAAGTCAGGACTGCGGCCAAGGAAGTG TACGATGTCGATGATGTTTTGAAGAAGGTTTCAAGCTCTGGTCTTGGTAAAGAACCAAGAATCAAGGGTATCATA GGCGAGATCAAGGAGTCGTTATCATGA |
Transcript | >Ani_SJS100_1|g4853.t1 ATGCCTGAGTTCAAGATCTCCGCTTCTTTGGAGGGCCACGGCGATGATGTTCGCGCCGTGGCCTTTCCGAATCCC AATGCTATATTTTCGGCGTCGCGAGATGCAACAGTCCGACTCTGGAAACTAGTCTCTACCCCACCTCCGGCATAT GACTACACCATCACCTCTCACGGCCAGGCCTTCATCAACGCTTTGGCATACTACCCACCTACCCCCCAGTTTCCC GATGGACTTGTCCTTTCCGGTGGTCAAGATACTATCATTGAAGCCAGACAACCAGGCAAAGCTGCCGACGATAAC GCGGATGCTATGCTCTTGGGCCATACACATAATGTCTGTGCGCTGGATGTGTCACATGATGGCGGATGGGTAGTC AGCGGAAGCTGGGACTCGACAGCTAGACTATGGAAAGTGGGTAAATGGGAAACCGATGTCGTGCTGGAGGGCCAT CAAGGAAGTGTTTGGACGGTGCTTGCCTATGACAAGGATACGGTCATCACAGGCTGCGCGGACAAAATAATACGT ATTTTTAACACCTCTGGCACACTGCTGAGAACAATCGAAAATTCACAGGACGTTGTGAGAGCTCTTTGCAAGGTT CCCGCTTCGAACCCCACCGGGGCGCACTTTGCTTCGGCGAGCAACGATGGAGTGATTCGTCTTTTTACCATACAA GGCCAACTCGTCGGGGAGATGCATGGCCACGAGAGCTTCATTTATTCTCTGGCCGCTTTGCCTTCGGGTGAGTTA GTCAGTTCCGGAGAAGATCGGACGGTGAGAGTCTGGGATGGTACGCAGTGCGTACAGACGATCACACACCCTGCG ATCTCTGTCTGGAGCGTCGCAGTATGCAAGGAGACCGGCGACATTGTTACAGGAGCCAGTGACCGAATCACACGC GTGTTTAGCAGGAGCCAGGAGCGCGTGGCAAGCCCAGAAGTAGTACAACAGTTCGAGAAGACTGTGAAGGAGTCG GCAATCCCAGAGCAGCAGATTGGGAAGATCAACAAAGATAAGCTTCCGGGTACGGAGTTTCTCAGGCAGAAATCC GGGACCAAGGACGGGCAGGTGCAGATGATCCGTGAGGCCGATGGTAGCGTTACTGCTCACACTTGGTCAGCGGCC TCACGGGAATGGGTTGCGGTTGGCACGGTAGTTGATTCCGCTGCCAGCAGTGGAAGGAAAACGGAGTATCTGGGT CAAGACTACGACTATGTCTTTGATGTCGACGTGGAAGACGGCAAACCCCCCCTCAAATTGCCATACAACGTCTCT CAAAACCCCTACGAGGCTGCGACCAAGTTTATCCAGGACAACGAACTGTCGATGAATTACCTTGATCAAGTTGCT CAGTTCATCGTTCAGAATACGCAAGGTGCGACTCTTGGTCAGACGTCTCAGGGGCCGACGCCCGCGGGGGCCGAT CCCTGGGGTCAAGAGAGGCGTTATCGTCCTGAAGATGCGCAGTCGCCCCCTGCTCCTGAGGCCCGACCGAAGGTC CTTCCGCAAAAAACATATCTTTCCATAAAATCTGCTAATCTTAAACTGATCGCTAAGAAGTTGCAAGAGCTGAAC CAACACGTCATATCCTCCGGATCGAAAGACCTGTCGCTCAGCCCTTCAGAGTTGGAGACGGTGGCAACCTTGTGT GGTCAGTTGGAGTCTTCGAATGTTGAGCAGTCTCCGGCAGTGGAGGCTGGTGTTGTTTTACTATACAAGGTCGCA ACCGTCTGGCCCGTCGCAAGCAGACTACCAGGTCTTGATCTTCTCCGCTTGTCCGCCGCTGCTACTCCCGTGACT GCCACTGCAGATTACGATGGCAAGGATCTCATCTCAGGGATTAAGTCTAGCGGGGTGTTCGATTCACCGTTCAAT GTCAATAATGCGATGCTGTCAATACGCATGCTCGCCAACCTTTTCGAAACGGATGCGGGACGTGACCTGGCCACT AGCAAGTTTGAGCAGATTCTGAGCGGCGTCAAGTCCGCTTTAACCAACAGTGGGACGACGCCGAACCGAAATCTC ACCATTGCCATTACAACACTCTACATCAACTTTGCCGTTTACCTGACCTCTGCGGGCAGAGAATCGATGCCTGAG TCATCGGAACAGGCTCTGGTGCTTCTCGGCGAGCTAACGACATTGATTACCGGTGAAAAGGACTCTGAAGCAGTC TACCGCGGCCTTGTGGCTCTAGGGACCTTGATCAAGGGACTAGGGGAAGAAGTCAGGACTGCGGCCAAGGAAGTG TACGATGTCGATGATGTTTTGAAGAAGGTTTCAAGCTCTGGTCTTGGTAAAGAACCAAGAATCAAGGGTATCATA GGCGAGATCAAGGAGTCGTTATCATGA |
Gene | >Ani_SJS100_1|g4853.t1 ATGCCTGAGTTCAAGATCTCCGCTTCTTTGGAGGGCCACGGCGATGATGTAAGAACATCCCGGCTGTTGACGCTG GCCACCTTTCACCTTCAACCCCCCTCCATTGTCGCCCACTGACGCCTCTTTCTCTCACTCTCAGGTTCGCGCCGT GGCCTTTCCGAATCCCAATGCTATATTTTCGGCGTCGCGAGATGCAACAGTCCGACTCTGGAAACTAGTCTCTAC CCCACCTCCGGCATATGACTACACCATCACCTCTCACGGCCAGGCCTTCATCAACGCTTTGGCATACTACCCACC TACCCCCCAGTTTCCCGATGGACTTGTCCTTTCCGGTGGTCAAGATACTATCATTGAAGCCAGACAACCAGGCAA AGCTGCCGACGATAACGCGGATGCTATGCTCTTGGGCCATACACATAATGTCTGTGCGCTGGATGTGTCACATGA TGGCGGATGGGTAGTCAGCGGAAGCTGGGACTCGACAGCTAGACTATGGAAAGTGGGTAAATGGGAAACCGATGT CGTGCTGGAGGGCCATCAAGGAAGTGTTTGGACGGTGCTTGCCTATGACAAGGATACGGTCATCACAGGTAGGCG CGCCTTACCCCTGTATATGAGACAGATGGGTCGTTCTATGGATATGCTAATAATTCCCCAGGCTGCGCGGACAAA ATAATACGTATTTTTAACACCTCTGGCACACTGCTGAGAACAATCGAAAATTCACAGGACGTTGTGAGAGCTCTT TGCAAGGTTCCCGCTTCGAACCCCACCGGGGCGCACTTTGCTTCGGCGAGCAACGATGGAGTGATTCGTCTTTTT ACCATACAAGGCCAACTCGTCGGGGAGATGCATGGCCACGAGAGCTTCATTTATTCTCTGGCCGCTTTGCCTTCG GGTGAGTTAGTCAGTTCCGGAGAAGATCGGACGGTGAGAGTCTGGGATGGTACGCAGTGCGTACAGACGATCACA CACCCTGCGATCTCTGTCTGGAGCGTCGCAGTATGCAAGGAGACCGGCGACATTGTTACAGGAGCCAGTGACCGA ATCACACGCGTGTTTAGCAGGAGCCAGGAGCGCGTGGCAAGCCCAGAAGTAGTACAACAGTTCGAGAAGACTGTG AAGGAGTCGGCAATCCCAGAGCAGCAGATTGGGAAGATCAACAAAGATAAGCTTCCGGGTACGGAGTTTCTCAGG CAGAAATCCGGGACCAAGGACGGGCAGGTGCAGATGATCCGTGAGGCCGATGGTAGCGTTACTGCTCACACTTGG TCAGCGGCCTCACGGGAATGGGTTGCGGTTGGCACGGTAGTTGATTCCGCTGCCAGCAGTGGAAGGAAAACGGAG TATCTGGGTCAAGACTACGACTATGTCTTTGATGTCGACGTGGAAGACGGCAAACCCCCCCTCAAATTGCCATAC AACGTCTCTCAAAACCCCTACGAGGCTGCGACCAAGTTTATCCAGGACAACGAACTGTCGATGAATTACCTTGAT CAAGTTGCTCAGTTCATCGTTCAGAATACGCAAGGTGCGACTCTTGGTCAGACGTCTCAGGGGCCGACGCCCGCG GGGGCCGATCCCTGGGGTCAAGAGAGGCGTTATCGTCCTGAAGATGCGCAGTCGCCCCCTGCTCCTGAGGCCCGA CCGAAGGTCCTTCCGCAAAAAACATATCTTTCCATAAAATCTGCTAATCTTAAACTGATCGCTAAGAAGTTGCAA GAGCTGAACCAACACGTCATATCCTCCGGATCGAAAGACCTGTCGCTCAGCCCTTCAGAGTTGGAGACGGTGGCA ACCTTGTGTGGTCAGTTGGAGTCTTCGAATGTTGAGCAGTCTCCGGCAGTGGAGGCTGGTGTTGTTTTACTATAC AAGGTCGCAACCGTCTGGCCCGTCGCAAGCAGACTACCAGGTCTTGATCTTCTCCGCTTGTCCGCCGCTGCTACT CCCGTGACTGCCACTGCAGATTACGATGGCAAGGATCTCATCTCAGGGATTAAGTCTAGCGGGGTGTTCGATTCA CCGTTCAATGTCAATAATGCGATGCTGTCAATACGCATGCTCGCCAACCTTTTCGAAACGGATGCGGGACGTGAC CTGGCCACTAGCAAGTTTGAGCAGATTCTGAGCGGCGTCAAGTCCGCTTTAACCAACAGTGGGACGACGCCGAAC CGAAATCTCACCATTGCCATTACAACACTCTACATCAACTTTGCCGTTTACCTGACCTCTGCGGGCAGAGAATCG ATGCCTGAGTCATCGGAACAGGCTCTGGTGCTTCTCGGCGAGCTAACGACATTGATTACCGGTGAAAAGGACTCT GAAGCAGTCTACCGCGGCCTTGTGGCTCTAGGGACCTTGATCAAGGGACTAGGGGAAGAAGTCAGGACTGCGGCC AAGGAAGTGTACGATGTCGATGATGTTTTGAAGAAGGTTTCAAGCTCTGGTCTTGGTAAAGAACCAAGAATCAAG GGTATCATAGGCGAGATCAAGGAGTCGTTATCATGA |