© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g4816.t1 |
| Gene name | |
| Location | scaffold_025:242065..243554 |
| Strand | - |
| Gene length (bp) | 1489 |
| Transcript length (bp) | 1266 |
| Coding sequence length (bp) | 1266 |
| Protein length (aa) | 422 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02535 | Zip | ZIP Zinc transporter | 3.6E-62 | 84 | 418 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030001 | metal ion transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0046873 | metal ion transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0006812 | cation transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0006811 | ion transport | No |
| GO:0005215 | transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 30 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 83 | 105 | 22 |
| 3 | 112 | 134 | 22 |
| 4 | 154 | 173 | 19 |
| 5 | 312 | 334 | 22 |
| 6 | 366 | 388 | 22 |
| 7 | 401 | 420 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4816.t1 MAPSFLAPARRMGLALAAGLVLFSALAVAHDAISVGDMSVGQIEEELQNCPLVESLNEHKRAAAPQTTSLTSKIF SILFPGSPAVNAILATIYISGPPNFLLALCPPNIDPSSLSVMVAFAVGGLLGDTIFHLLPEIFLGEDSPDHVRFV MVEPNRNLLLGLGIMVGFFTFVAMDKTLRIATGGAGHDHSHAHAHTDSANDDHKPTGTTTGASPQPSTDLKQRKP ASSNTAPQPADKDDEKDINPSVKLGGYLNLIADFTHNITDGLAMSSSFYASPTIGATTTVAVFFHEIPHEVGDFA LLIQSGFSKRKAMGAQFVTAIGAFLGTFIGIAVQELGGNGSTAATSTSTNSLPTGLLGTSLTWGDMLLPFTAGTF LYVGTVSVIPELLETGKDKRVEIKKTIVQFLAVMVGAGIMLVISWD* |
| Coding | >Ani_SJS100_1|g4816.t1 ATGGCACCTTCTTTTCTGGCTCCAGCTCGGCGCATGGGCCTTGCGCTCGCTGCGGGTCTTGTTCTCTTCTCCGCA CTAGCTGTTGCGCATGATGCTATCTCTGTAGGGGACATGTCTGTGGGACAGATTGAGGAGGAGTTGCAGAACTGC CCCCTCGTCGAGTCCCTTAACGAGCATAAGCGCGCCGCAGCTCCCCAAACAACCAGCTTGACTTCCAAGATCTTC TCCATCCTCTTCCCCGGCAGTCCTGCAGTAAATGCTATCCTGGCGACGATCTACATCTCCGGCCCCCCTAACTTC CTCCTGGCCCTATGCCCTCCAAACATCGATCCCTCCTCCCTGTCCGTCATGGTCGCGTTCGCAGTAGGCGGCCTC CTAGGCGATACCATTTTCCACTTGCTCCCCGAGATCTTTCTCGGCGAAGACTCCCCAGACCATGTTCGCTTCGTG ATGGTTGAGCCAAACCGCAACCTCCTCCTGGGCCTGGGAATCATGGTGGGCTTCTTCACCTTCGTCGCAATGGAC AAAACCCTACGTATCGCCACCGGAGGAGCTGGACACGACCACTCCCACGCCCACGCTCACACTGACAGCGCCAAC GACGACCACAAACCCACAGGCACAACAACCGGCGCCTCCCCGCAACCCTCCACCGATCTCAAACAGCGCAAGCCC GCAAGCAGCAACACCGCTCCCCAACCCGCCGACAAGGACGACGAGAAGGATATCAACCCCAGCGTCAAACTCGGC GGCTACCTCAACCTGATTGCCGACTTCACTCACAACATTACCGACGGCCTCGCCATGTCCTCGTCCTTCTACGCC TCCCCCACCATCGGCGCAACCACCACTGTCGCCGTCTTCTTCCACGAGATCCCCCACGAGGTTGGCGACTTCGCC CTCCTCATCCAATCCGGCTTCTCAAAGCGCAAAGCTATGGGCGCGCAATTCGTCACAGCCATTGGCGCCTTCCTC GGCACTTTCATCGGAATCGCCGTCCAAGAGTTGGGCGGGAATGGCTCCACTGCTGCCACCTCCACATCCACTAAT AGCCTGCCAACCGGCCTCCTCGGAACAAGCCTCACCTGGGGCGATATGCTCCTACCCTTCACGGCAGGGACATTC CTCTACGTAGGAACAGTCTCCGTTATCCCGGAATTATTGGAAACGGGCAAGGATAAGCGCGTGGAGATCAAGAAG ACAATCGTGCAGTTCTTGGCCGTTATGGTTGGGGCGGGGATTATGCTTGTCATTTCTTGGGATTAG |
| Transcript | >Ani_SJS100_1|g4816.t1 ATGGCACCTTCTTTTCTGGCTCCAGCTCGGCGCATGGGCCTTGCGCTCGCTGCGGGTCTTGTTCTCTTCTCCGCA CTAGCTGTTGCGCATGATGCTATCTCTGTAGGGGACATGTCTGTGGGACAGATTGAGGAGGAGTTGCAGAACTGC CCCCTCGTCGAGTCCCTTAACGAGCATAAGCGCGCCGCAGCTCCCCAAACAACCAGCTTGACTTCCAAGATCTTC TCCATCCTCTTCCCCGGCAGTCCTGCAGTAAATGCTATCCTGGCGACGATCTACATCTCCGGCCCCCCTAACTTC CTCCTGGCCCTATGCCCTCCAAACATCGATCCCTCCTCCCTGTCCGTCATGGTCGCGTTCGCAGTAGGCGGCCTC CTAGGCGATACCATTTTCCACTTGCTCCCCGAGATCTTTCTCGGCGAAGACTCCCCAGACCATGTTCGCTTCGTG ATGGTTGAGCCAAACCGCAACCTCCTCCTGGGCCTGGGAATCATGGTGGGCTTCTTCACCTTCGTCGCAATGGAC AAAACCCTACGTATCGCCACCGGAGGAGCTGGACACGACCACTCCCACGCCCACGCTCACACTGACAGCGCCAAC GACGACCACAAACCCACAGGCACAACAACCGGCGCCTCCCCGCAACCCTCCACCGATCTCAAACAGCGCAAGCCC GCAAGCAGCAACACCGCTCCCCAACCCGCCGACAAGGACGACGAGAAGGATATCAACCCCAGCGTCAAACTCGGC GGCTACCTCAACCTGATTGCCGACTTCACTCACAACATTACCGACGGCCTCGCCATGTCCTCGTCCTTCTACGCC TCCCCCACCATCGGCGCAACCACCACTGTCGCCGTCTTCTTCCACGAGATCCCCCACGAGGTTGGCGACTTCGCC CTCCTCATCCAATCCGGCTTCTCAAAGCGCAAAGCTATGGGCGCGCAATTCGTCACAGCCATTGGCGCCTTCCTC GGCACTTTCATCGGAATCGCCGTCCAAGAGTTGGGCGGGAATGGCTCCACTGCTGCCACCTCCACATCCACTAAT AGCCTGCCAACCGGCCTCCTCGGAACAAGCCTCACCTGGGGCGATATGCTCCTACCCTTCACGGCAGGGACATTC CTCTACGTAGGAACAGTCTCCGTTATCCCGGAATTATTGGAAACGGGCAAGGATAAGCGCGTGGAGATCAAGAAG ACAATCGTGCAGTTCTTGGCCGTTATGGTTGGGGCGGGGATTATGCTTGTCATTTCTTGGGATTAG |
| Gene | >Ani_SJS100_1|g4816.t1 ATGGCACCTTCTTTTCTGGCTCCAGCTCGGCGCATGGGCCTTGCGCTCGCTGCGGGTCTTGTTCTCTTCTCCGCA CTAGCTGTTGCGCATGATGCTATCTCTGTAGGGGACATGTCTGTGGGACAGATTGAGGAGGAGTTGCAGGTACGC TCGTGCCCCTTGCATCCTTGAAGTTCTATCTGGGAAACAGAGTCATCGATCTTCCCACTCCTCCCTCAACATACC TAACTAATGCCATCTAGAACTGCCCCCTCGTCGAGTCCCTTAACGAGCATAAGCGCGCCGCAGCTCCCCAAACAA CCAGCTTGACTTCCAAGATCTTCTCCATCCTCTTCCCCGGCAGTCCTGCAGTAAATGCTATCCTGGCGACGATCT ACATCTCCGGCCCCCCTAGTATGTGACTTCTCGCATTAAACCTTTAACAATCATAACCATGTCCCCCGCACTAGA CTTCCTCCTGGCCCTATGCCCTCCAAACATCGATCCCTCCTCCCTGTCCGTCATGGTCGCGTTCGCAGTAGGCGG CCTCCTAGGCGATACCATTTTCCACTTGCTCCCCGAGATCTTTCTCGGCGAAGACTCCCCAGACCATGTTCGCTT CGTGATGGTTGAGCCAAACCGCAACCTCCTCCTGGGCCTGGGAATCATGGTGGGCTTCTTCACCTTCGTCGCAAT GGACAAAACCCTACGTATCGCCACCGGAGGAGCTGGACACGACCACTCCCACGCCCACGCTCACACTGACAGCGC CAACGACGACCACAAACCCACAGGCACAACAACCGGCGCCTCCCCGCAACCCTCCACCGATCTCAAACAGCGCAA GCCCGCAAGCAGCAACACCGCTCCCCAACCCGCCGACAAGGACGACGAGAAGGATATCAACCCCAGCGTCAAACT CGGCGGCTACCTCAACCTGATTGCCGACTTCACTCACAACATTACCGACGGCCTCGCCATGTCCTCGTCCTTCTA CGCCTCCCCCACCATCGGCGCAACCACCACTGTCGCCGTCTTCTTCCACGAGATCCCCCACGAGGTTGGCGACTT CGCCCTCCTCATCCAATCCGGCTTCTCAAAGCGCAAAGCTATGGGCGCGCAATTCGTCACAGCCATTGGCGCCTT CCTCGGCACTTTCATCGGAATCGCCGTCCAAGAGTTGGGCGGGAATGGCTCCACTGCTGCCACCTCCACATCCAC TAATAGCCTGCCAACCGGCCTCCTCGGAACAAGCCTCACCTGGGGCGATATGCTCCTACCCTTCACGGCAGGGAC ATTCCTCTACGTAGGAACAGTCTCCGTTATCCCGGAATTATTGGAAACGGGCAAGGATAAGCGCGTGGAGATCAA GAAGACAATCGTGCAGTTCTTGGCCGTTATGGTTGGGGCGGGGATTATGCTTGTGTATGTTTCTATCCCTCCTTC CTTGGTACGACACATCGTGATTATCTCCATCGCTAACGGTCATCGTAGCATTTCTTGGGATTAG |