© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4814.t1 |
| Gene name | |
| Location | scaffold_025:238119..239493 |
| Strand | + |
| Gene length (bp) | 1374 |
| Transcript length (bp) | 1041 |
| Coding sequence length (bp) | 1041 |
| Protein length (aa) | 347 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00153 | Mito_carr | Mitochondrial carrier protein | 6.7E-18 | 45 | 130 |
| PF00153 | Mito_carr | Mitochondrial carrier protein | 6.0E-17 | 154 | 246 |
| PF00153 | Mito_carr | Mitochondrial carrier protein | 4.2E-14 | 254 | 345 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 63 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 155 | 177 | 22 |
| 2 | 213 | 235 | 22 |
| 3 | 250 | 272 | 22 |
| 4 | 316 | 338 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4814.t1 MSSTSAPLPTSTTSGVPEQHSSGIMAKADTPKNSPPKSQSSKHDYKGFVAGVFSGIAKLSVGHPFDTIKVRLQTS HDGHFRGPLDCLLQTVRKEGVSGLYKGATPPLVGWMVMDSVMLGSLTLYRRLLLESVFSKPEIRASMPFIGKQTD LHTLPSFGHGIAGIMAGTTVSFIAAPVEHVKARLQIQYSADKSKRLYSGPIDCVRKMLRTHGIAGLYRGLCATMV FRSFFFFWWGSYDVLTRLMKEKTSLSAPAINFWAGGISAQVFWITSYPSDVVKQRLMTDPMGGALGDGQRRFQWW KDAAVAVYRERGWRGYWRGFVPCFLRAFPANAMALVAFEGVMRWLP* |
| Coding | >Ani_SJS100_1|g4814.t1 ATGTCGTCGACGTCCGCACCGCTGCCGACCTCCACGACATCCGGAGTACCAGAGCAACATTCTTCCGGGATTATG GCCAAGGCCGATACACCAAAGAACAGCCCGCCAAAGTCACAAAGCTCTAAGCATGACTATAAAGGCTTTGTAGCG GGAGTCTTCTCAGGAATCGCCAAACTTAGTGTTGGCCATCCATTCGACACAATCAAGGTACGCTTACAGACGAGC CATGATGGGCATTTCCGGGGCCCATTGGACTGTCTGCTACAAACGGTCCGCAAAGAGGGTGTTAGTGGGTTGTAT AAGGGAGCCACTCCGCCGCTGGTCGGTTGGATGGTCATGGACTCTGTCATGCTGGGTTCCTTAACCTTATATCGC CGGCTATTACTGGAAAGCGTGTTTTCGAAACCAGAGATTCGCGCAAGCATGCCGTTCATTGGCAAGCAGACGGAT CTTCACACGCTCCCTAGCTTCGGTCATGGCATTGCGGGCATCATGGCTGGAACGACTGTCAGTTTCATTGCCGCA CCGGTGGAGCACGTCAAGGCGCGTCTTCAGATTCAGTACTCTGCAGATAAATCCAAGCGCCTGTATAGTGGACCT ATAGATTGCGTTCGCAAGATGCTTCGCACACACGGCATTGCCGGGTTATATCGTGGACTCTGCGCGACCATGGTA TTTCGGTCGTTCTTTTTCTTCTGGTGGGGTTCCTACGACGTCCTTACTCGGTTGATGAAGGAGAAGACCAGCCTG TCTGCTCCTGCCATCAACTTCTGGGCCGGGGGGATTTCCGCGCAAGTTTTCTGGATCACGTCGTATCCGTCCGAT GTGGTGAAGCAGCGCCTCATGACGGACCCGATGGGAGGCGCCCTGGGCGACGGGCAGCGCAGGTTCCAGTGGTGG AAGGATGCTGCAGTGGCGGTCTATCGGGAACGAGGGTGGAGGGGGTATTGGCGAGGGTTTGTGCCATGCTTCTTA CGAGCATTCCCGGCGAATGCCATGGCTTTGGTTGCATTTGAGGGTGTGATGCGGTGGCTGCCGTGA |
| Transcript | >Ani_SJS100_1|g4814.t1 ATGTCGTCGACGTCCGCACCGCTGCCGACCTCCACGACATCCGGAGTACCAGAGCAACATTCTTCCGGGATTATG GCCAAGGCCGATACACCAAAGAACAGCCCGCCAAAGTCACAAAGCTCTAAGCATGACTATAAAGGCTTTGTAGCG GGAGTCTTCTCAGGAATCGCCAAACTTAGTGTTGGCCATCCATTCGACACAATCAAGGTACGCTTACAGACGAGC CATGATGGGCATTTCCGGGGCCCATTGGACTGTCTGCTACAAACGGTCCGCAAAGAGGGTGTTAGTGGGTTGTAT AAGGGAGCCACTCCGCCGCTGGTCGGTTGGATGGTCATGGACTCTGTCATGCTGGGTTCCTTAACCTTATATCGC CGGCTATTACTGGAAAGCGTGTTTTCGAAACCAGAGATTCGCGCAAGCATGCCGTTCATTGGCAAGCAGACGGAT CTTCACACGCTCCCTAGCTTCGGTCATGGCATTGCGGGCATCATGGCTGGAACGACTGTCAGTTTCATTGCCGCA CCGGTGGAGCACGTCAAGGCGCGTCTTCAGATTCAGTACTCTGCAGATAAATCCAAGCGCCTGTATAGTGGACCT ATAGATTGCGTTCGCAAGATGCTTCGCACACACGGCATTGCCGGGTTATATCGTGGACTCTGCGCGACCATGGTA TTTCGGTCGTTCTTTTTCTTCTGGTGGGGTTCCTACGACGTCCTTACTCGGTTGATGAAGGAGAAGACCAGCCTG TCTGCTCCTGCCATCAACTTCTGGGCCGGGGGGATTTCCGCGCAAGTTTTCTGGATCACGTCGTATCCGTCCGAT GTGGTGAAGCAGCGCCTCATGACGGACCCGATGGGAGGCGCCCTGGGCGACGGGCAGCGCAGGTTCCAGTGGTGG AAGGATGCTGCAGTGGCGGTCTATCGGGAACGAGGGTGGAGGGGGTATTGGCGAGGGTTTGTGCCATGCTTCTTA CGAGCATTCCCGGCGAATGCCATGGCTTTGGTTGCATTTGAGGGTGTGATGCGGTGGCTGCCGTGA |
| Gene | >Ani_SJS100_1|g4814.t1 ATGTCGTCGACGTCCGCACCGCTGCCGACCTCCACGACATCCGGAGTACCAGAGCAACATTCTTCCGGGATTATG GCCAAGGCCGATACACCAAAGAACAGCCCGCCAAAGTCACAAAGCTCTAAGCATGACTATAAAGGCTTTGTAGCG GGAGTCTTCTCAGGAATCGCCAAACTTAGTGGTATGTTCTGGCCCGCGGTGCGCATAGTCTGCGTGCTTTTTTGG GAGTAACCATCGCTAACAGATTCCGATGCATAGTTGGCCATCCGTACGTGACTGCGCACCTTCTTCCTCTTCCCC GCCACTTATACTGCCTCTCAATGGACAACTCCATATAATCTCACAAATTGACCATGGGTGATTCTCGCGCAGATT CGACACAATCAAGGTACGCTTACAGACGAGCCATGATGGGCATTTCCGGGGCCCATTGGACTGTCTGCTACAAAC GGTCCGCAAAGAGGGTGTTAGTGGGTTGTATAAGGGAGCCACTCCGCCGCTGGTCGGTTGGATGGTCATGGACTC TGTGTGAGTAACTTTGCCCGGCGGCTGGAAAACGCCAAAAAGAGAAAAGAGAGAGAGAGAGAGAGAGAGAGACGG AAGGACTGATCAGTCAAACACAGCATGCTGGGTTCCTTAACCTTATATCGCCGGCTATTACTGGAAAGCGTGTTT TCGAAACCAGAGATTCGCGCAAGCATGCCGTTCATTGGCAAGCAGACGGATCTTCACACGCTCCCTAGCTTCGGT CATGGCATTGCGGGCATCATGGCTGGAACGACTGTCAGTTTCATTGCCGCACCGGTGGAGCACGTCAAGGCGCGT CTTCAGATTCAGTACTCTGCAGATAAATCCAAGCGCCTGTATAGTGGACCTATAGATTGCGTTCGCAAGATGGTA AGAAATACGGGTCTCCTAAAACGTCCGACCTTGTTGGCTGACCTATATACATAGCTTCGCACACACGGCATTGCC GGGTTATATCGTGGACTCTGCGCGACCATGGTATTTCGGTCGTTCTTTTTCTTCTGGTGGGGTTCCTACGACGTC CTTACTCGGTTGATGAAGGAGAAGACCAGCCTGTCTGCTCCTGCCATCAACTTCTGGGCCGGGGGGATTTCCGCG CAAGTTTTCTGGATCACGTCGTATCCGTCCGATGTGGTGAAGCAGCGCCTCATGACGGACCCGATGGGAGGCGCC CTGGGCGACGGGCAGCGCAGGTTCCAGTGGTGGAAGGATGCTGCAGTGGCGGTCTATCGGGAACGAGGGTGGAGG GGGTATTGGCGAGGGTTTGTGCCATGCTTCTTACGAGCATTCCCGGCGAATGCCATGGCTTTGGTTGCATTTGAG GGTGTGATGCGGTGGCTGCCGTGA |