Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g4809.t1
Gene name
Location	scaffold_025:222789..223660
Strand	-
Gene length (bp)	871
Transcript length (bp)	600
Coding sequence length (bp)	600
Protein length (aa)	200

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13185	GAF_2	GAF domain	2.1E-13	106	194
PF01590	GAF	GAF domain	5.8E-09	113	194

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 64	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g4809.t1 MPHADSSYFGAGNGSKSEVYTQVLEQARGLVYDQRNWLTNHFSHRQQVSNFSNVASLLWHAYAALPAPSSSVNWA GFYIRQDKFPVLGAPLEEDSKKKPVLLLGPFQGRPACQEIRFGRGVCGTAAEKRETVVVPDVLNFPGHIACDASS RSEIVVPILSKGETVAIIDIDCAEPDGFDDEDKKYLEELAALLAECCDW*
Coding	>Ani_SJS100_1\|g4809.t1 ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGAG CAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCC GGCTTCTACATCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCA GCTGAGAAGCGCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCG GATGGATTTGATGATGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
Transcript	>Ani_SJS100_1\|g4809.t1 ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGAG CAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCC GGCTTCTACATCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCA GCTGAGAAGCGCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCG GATGGATTTGATGATGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
Gene	>Ani_SJS100_1\|g4809.t1 ATGGTATAGTCTCTTTTCCAGCTGTAGCACATGTTCCTTCGAGTCATGGAATATCCGTCCACTAACATCCCCCCA CCAGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGA GCAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGGTACGATCTTCTTACCTCTAACTCCTATCTCTCCCATA TCCAATTCACCAGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGGTAAGAACAACTTCAACTATCGCGCCC CCTCTCACCCAAAGAGCACAGCAACCTAACCCTCTCCAAACCAATACAGTAATTTCTCCAACGTCGCCTCCCTCC TCTGGCACGCCTACGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACATCCGCCAGGACA AGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTCCTCCTTCTCGGTCCATTCCAGG GCCGTCCGGCATGTCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGCGCGAGACGGTCG TCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGCCGGAGTGAGATTGTGGTGCCGA TTTTGAGCAAGGGGGAGGTGAGTACTGGATCTATGTTATCTGTATCTAATCTAGTGGATGATGGCTGATGGTGTA TGTTGGGCAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGATGAGGATAAAAAATA TCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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