Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4809.t1
Gene name
Locationscaffold_025:222789..223660
Strand-
Gene length (bp)871
Transcript length (bp)600
Coding sequence length (bp)600
Protein length (aa) 200

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13185 GAF_2 GAF domain 2.1E-13 106 194
PF01590 GAF GAF domain 5.8E-09 113 194

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4809.t1
MPHADSSYFGAGNGSKSEVYTQVLEQARGLVYDQRNWLTNHFSHRQQVSNFSNVASLLWHAYAALPAPSSSVNWA
GFYIRQDKFPVLGAPLEEDSKKKPVLLLGPFQGRPACQEIRFGRGVCGTAAEKRETVVVPDVLNFPGHIACDASS
RSEIVVPILSKGETVAIIDIDCAEPDGFDDEDKKYLEELAALLAECCDW*
Coding >Ani_SJS100_1|g4809.t1
ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGAG
CAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT
TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCC
GGCTTCTACATCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC
CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCA
GCTGAGAAGCGCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC
CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCG
GATGGATTTGATGATGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
Transcript >Ani_SJS100_1|g4809.t1
ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGAG
CAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT
TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCC
GGCTTCTACATCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC
CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCA
GCTGAGAAGCGCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC
CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCG
GATGGATTTGATGATGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
Gene >Ani_SJS100_1|g4809.t1
ATGGTATAGTCTCTTTTCCAGCTGTAGCACATGTTCCTTCGAGTCATGGAATATCCGTCCACTAACATCCCCCCA
CCAGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGA
GCAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGGTACGATCTTCTTACCTCTAACTCCTATCTCTCCCATA
TCCAATTCACCAGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGGTAAGAACAACTTCAACTATCGCGCCC
CCTCTCACCCAAAGAGCACAGCAACCTAACCCTCTCCAAACCAATACAGTAATTTCTCCAACGTCGCCTCCCTCC
TCTGGCACGCCTACGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACATCCGCCAGGACA
AGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTCCTCCTTCTCGGTCCATTCCAGG
GCCGTCCGGCATGTCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGCGCGAGACGGTCG
TCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGCCGGAGTGAGATTGTGGTGCCGA
TTTTGAGCAAGGGGGAGGTGAGTACTGGATCTATGTTATCTGTATCTAATCTAGTGGATGATGGCTGATGGTGTA
TGTTGGGCAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGATGAGGATAAAAAATA
TCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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