Protein ID | Ani_SJS100_1|g4785.t1 |
Gene name | |
Location | scaffold_025:156260..157993 |
Strand | + |
Gene length (bp) | 1733 |
Transcript length (bp) | 1374 |
Coding sequence length (bp) | 1374 |
Protein length (aa) | 458 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 3.6E-39 | 52 | 436 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 48 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 59 | 81 | 22 |
2 | 85 | 107 | 22 |
3 | 128 | 150 | 22 |
4 | 160 | 182 | 22 |
5 | 189 | 211 | 22 |
6 | 231 | 253 | 22 |
7 | 266 | 288 | 22 |
8 | 308 | 328 | 20 |
9 | 349 | 371 | 22 |
10 | 381 | 403 | 22 |
11 | 415 | 437 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4785.t1 MEAVHDSPPPYATEGIDEKKEDISQVEQNLKPGLEESDAFGNEEFAEIKYKTLKWWQCGLLMICESVSLGVLSLP AAVATLGFVPAVILIVGLGILATYTGYNIGLFRERYPHIQNLADAGEILMGPFGRELFGLGQFLFCIFVMGSHLL TFRVMMNTITDHGTCSIVFSVVGMIISMVLSIPRTMKGMTWISFASFLSIFSAVMITMIGVGVEKHPGRIIEATV DTTLYTAFTAVSNIVFAYCAHVAFFGLIAEMEKPKDFKKSLFMLQAFEISLYVTAACVIYYYVGKDVQSPALSSA GPLLKKVAYGIAIPTIVGAGVVNGHIGLKYIYFRTCSKSGLIHSRSRRSVAVWIALGLACWLVAWIIAEAIPVFS DLNSLISALFASWFSYGLSGIYWLHLNYGQWFASPRKIALTVLNAAIAVFGLVLCVLGLYASGTAIHNDANSNSF TCANTDS* |
Coding | >Ani_SJS100_1|g4785.t1 ATGGAGGCCGTTCACGACAGTCCCCCTCCCTACGCCACCGAAGGCATTGACGAGAAGAAGGAGGATATCAGCCAG GTGGAGCAGAATCTCAAGCCGGGCCTGGAGGAGTCCGACGCGTTCGGTAACGAGGAGTTTGCGGAAATCAAGTAC AAGACCTTGAAGTGGTGGCAATGTGGACTGCTCATGATTTGCGAGTCTGTCTCGCTGGGTGTGCTCTCGCTCCCC GCCGCCGTTGCAACCCTGGGTTTCGTCCCGGCCGTCATCCTCATCGTTGGTCTCGGAATCCTTGCGACCTACACC GGTTACAACATTGGATTGTTCAGAGAACGCTATCCCCACATTCAGAACCTGGCCGATGCGGGAGAAATCCTGATG GGCCCTTTCGGCCGTGAACTCTTCGGCCTGGGCCAGTTCCTCTTCTGCATCTTCGTCATGGGCAGCCATCTCCTG ACCTTCCGGGTCATGATGAACACCATCACCGACCATGGCACCTGTTCCATCGTCTTCAGTGTGGTTGGCATGATC ATTTCCATGGTCCTCTCCATTCCCCGTACCATGAAGGGCATGACCTGGATTTCCTTCGCCTCCTTCCTCAGTATC TTCAGTGCGGTCATGATCACCATGATCGGTGTGGGCGTCGAGAAGCACCCCGGTCGCATCATCGAGGCCACCGTC GACACCACCCTCTACACGGCCTTCACCGCGGTCTCCAACATTGTCTTCGCCTACTGTGCGCACGTCGCCTTCTTC GGTCTTATCGCCGAGATGGAGAAGCCCAAGGACTTCAAGAAGTCGCTGTTCATGCTGCAGGCGTTTGAAATCAGT CTCTACGTGACTGCTGCCTGCGTCATCTACTACTACGTCGGCAAGGATGTGCAATCCCCCGCCCTCAGCTCGGCT GGTCCTCTTCTGAAGAAGGTTGCCTATGGAATTGCCATTCCCACCATTGTCGGTGCCGGTGTCGTGAATGGTCAC ATCGGCTTGAAGTACATCTACTTCCGCACTTGCTCCAAGTCGGGTCTCATCCACAGCCGCAGCCGCCGCTCGGTC GCCGTCTGGATCGCCTTGGGCTTGGCCTGCTGGCTGGTTGCCTGGATTATCGCCGAGGCCATCCCTGTCTTCAGC GACCTCAACTCGCTTATTAGCGCTCTCTTTGCTAGTTGGTTCAGTTACGGCCTCAGTGGCATCTACTGGCTCCAC CTCAACTACGGCCAGTGGTTTGCCAGCCCCCGCAAGATCGCCCTGACCGTGCTCAATGCCGCGATCGCTGTGTTC GGTTTGGTGCTGTGCGTCCTGGGTCTCTATGCCTCGGGAACGGCCATCCACAACGATGCCAACAGCAACAGTTTC ACCTGTGCCAACACGGATAGCTGA |
Transcript | >Ani_SJS100_1|g4785.t1 ATGGAGGCCGTTCACGACAGTCCCCCTCCCTACGCCACCGAAGGCATTGACGAGAAGAAGGAGGATATCAGCCAG GTGGAGCAGAATCTCAAGCCGGGCCTGGAGGAGTCCGACGCGTTCGGTAACGAGGAGTTTGCGGAAATCAAGTAC AAGACCTTGAAGTGGTGGCAATGTGGACTGCTCATGATTTGCGAGTCTGTCTCGCTGGGTGTGCTCTCGCTCCCC GCCGCCGTTGCAACCCTGGGTTTCGTCCCGGCCGTCATCCTCATCGTTGGTCTCGGAATCCTTGCGACCTACACC GGTTACAACATTGGATTGTTCAGAGAACGCTATCCCCACATTCAGAACCTGGCCGATGCGGGAGAAATCCTGATG GGCCCTTTCGGCCGTGAACTCTTCGGCCTGGGCCAGTTCCTCTTCTGCATCTTCGTCATGGGCAGCCATCTCCTG ACCTTCCGGGTCATGATGAACACCATCACCGACCATGGCACCTGTTCCATCGTCTTCAGTGTGGTTGGCATGATC ATTTCCATGGTCCTCTCCATTCCCCGTACCATGAAGGGCATGACCTGGATTTCCTTCGCCTCCTTCCTCAGTATC TTCAGTGCGGTCATGATCACCATGATCGGTGTGGGCGTCGAGAAGCACCCCGGTCGCATCATCGAGGCCACCGTC GACACCACCCTCTACACGGCCTTCACCGCGGTCTCCAACATTGTCTTCGCCTACTGTGCGCACGTCGCCTTCTTC GGTCTTATCGCCGAGATGGAGAAGCCCAAGGACTTCAAGAAGTCGCTGTTCATGCTGCAGGCGTTTGAAATCAGT CTCTACGTGACTGCTGCCTGCGTCATCTACTACTACGTCGGCAAGGATGTGCAATCCCCCGCCCTCAGCTCGGCT GGTCCTCTTCTGAAGAAGGTTGCCTATGGAATTGCCATTCCCACCATTGTCGGTGCCGGTGTCGTGAATGGTCAC ATCGGCTTGAAGTACATCTACTTCCGCACTTGCTCCAAGTCGGGTCTCATCCACAGCCGCAGCCGCCGCTCGGTC GCCGTCTGGATCGCCTTGGGCTTGGCCTGCTGGCTGGTTGCCTGGATTATCGCCGAGGCCATCCCTGTCTTCAGC GACCTCAACTCGCTTATTAGCGCTCTCTTTGCTAGTTGGTTCAGTTACGGCCTCAGTGGCATCTACTGGCTCCAC CTCAACTACGGCCAGTGGTTTGCCAGCCCCCGCAAGATCGCCCTGACCGTGCTCAATGCCGCGATCGCTGTGTTC GGTTTGGTGCTGTGCGTCCTGGGTCTCTATGCCTCGGGAACGGCCATCCACAACGATGCCAACAGCAACAGTTTC ACCTGTGCCAACACGGATAGCTGA |
Gene | >Ani_SJS100_1|g4785.t1 ATGGAGGCCGTTCACGACAGTCCCCCTCCCTACGCCACCGAAGGCATTGACGAGAAGAAGGAGGATATCAGCCAG GTGGAGCAGAATCTCAAGCCGGGCCTGGAGGAGTCCGACGCGTTCGGTAACGAGGAGTTTGCGGAAATCAAGTAC AAGACCTTGAAGTGGTGGTATGTATCCGTCTCTTCCGCCTCCCACCATTGCACCTTCATCGCCGGCTAACACATT CACAACAGGCAATGTGGACTGCGTAAGCTGACTCTCCACTTCTCTCTCTGCATTGGCAAACTCTAATACCCCCGC AGTCATGATTTGCGAGTCTGTCTCGCTGGGTGTGCTCTCGCTCCCCGCCGCCGTTGCAACCCTGGGTTTCGTCCC GTAAGTCTAGCCGGAACGTGGATGCAACCCTTCCCACCCGCTAACTCCCGTCGTTCAGGGCCGTCATCCTCATCG TTGGTCTCGGAATCCTTGCGACCTACACCGGTTACAACATTGGATTGTTCAGAGAACGCTATCCCCACATTCAGA ACCTGGCCGATGCGGGAGAAATCCTGATGGGCCCTTTCGGCCGTGAACTCTTCGGCCTGGGCCAGTTCCTCTTCT GCATCTTCGTCATGGGCAGCCATCTCCTGACCTTCCGGGTCATGATGAACACCATCACCGACCATGGCACCTGTT CCATCGTCTTCAGTGTGGTTGGCATGATCATTTCCATGGTCCTCTCCATTCCCCGTACCATGAAGGGCATGACCT GGATTTCCTTCGCCTGTGAGTCTCTTTTGTCCGCTGCCGTGCGTACGCATCATCTCTGACTGGCCGTCTTGCCGT TTAGCCTTCCTCAGTATCTTCAGTGCGGTCATGATCACCATGATCGGTGTGGGCGTCGAGAAGCACCCCGGTCGC ATCATCGAGGCCACCGTCGACACCACCCTCTACACGGCCTTCACCGCGGTCTCCAACATTGTCTTCGCCTACTGT GCGCACGTCGCCTTCTTCGGTCTTATCGCCGAGATGGAGAAGCCCAAGGACTTCAAGAAGTCGCTGTTCATGCTG CAGGCGTTTGAAATCAGTCTCTACGTGACTGCTGCCTGCGTCATCTACTACTACGTCGGCAAGGATGTGCAATCC CCCGCCCTCAGCTCGGCTGGTCCTCTTCTGAAGAAGGTTGCCTATGGAATTGCCATTCCCACCGTAAGTCATCCC TCTTGACAGGTGCTGTTTGTATGCAACGAGCACTAACGCGTTTGCAGATTGTCGGTGCCGGTGTCGTGAATGGTC ACATCGGCTTGAAGTACATCTACTTCCGCACTTGCTCCAAGTCGGGTCTCATCCACAGCCGCAGCCGCCGCTCGG TCGCCGTCTGGATCGCCTTGGGCTTGGCCTGCTGGCTGGTTGCCTGGATTATCGCCGAGGCCATCCCTGTCTTCA GCGACCTCAACTCGCTTATTGTAAGTTTGGACCAGACCGTCTATCCTCTCGTACCGGCCGCTAATGACATGATTC AGAGCGCTCTCTTTGCTAGTTGGTTCAGTTACGGCCTCAGTGGCATCTACTGGCTCCACCTCAACTACGGCCAGT GGTTTGCCAGCCCCCGCAAGATCGCCCTGACCGTGCTCAATGCCGCGATCGCTGTGTTCGGTTTGGTGCTGTGCG TCCTGGGTCTCTATGCCTCGGGAACGGCCATCCACAACGATGCCAACAGCAACAGTTTCACCTGTGCCAACACGG ATAGCTGA |