Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4767.t1
Gene name
Locationscaffold_025:99253..99826
Strand+
Gene length (bp)573
Transcript length (bp)396
Coding sequence length (bp)396
Protein length (aa) 132

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07883 Cupin_2 Cupin domain 4.7E-11 43 110
PF00190 Cupin_1 Cupin 2.1E-06 34 111

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4767.t1
MANNKVDVTRSSDLDEATGGRTEGMVRKGAIIDKSDQLCALVMCAEPHSCSAVHHHGEQDTVVYAAKGHGSIVFD
GGKQRKDLSPGDFAIIPAYTEHQEMNQSDEDVEWVITRAGRKPITVNLQGWSNTSS*
Coding >Ani_SJS100_1|g4767.t1
ATGGCCAATAATAAGGTTGACGTCACTAGATCCTCGGACTTGGACGAGGCAACGGGGGGACGGACGGAGGGAATG
GTTCGGAAGGGAGCTATCATCGACAAGTCGGATCAGTTGTGCGCACTAGTCATGTGCGCCGAGCCACATTCCTGC
TCAGCTGTTCACCATCACGGCGAGCAGGATACCGTGGTTTACGCCGCAAAGGGCCACGGTTCCATTGTCTTCGAT
GGGGGAAAGCAGCGCAAAGACCTCTCCCCGGGTGACTTTGCTATCATTCCTGCCTACACGGAACACCAGGAGATG
AACCAATCAGATGAAGATGTTGAATGGGTGATCACCAGAGCAGGACGCAAGCCCATCACAGTCAACCTGCAAGGT
TGGTCTAATACTTCTAGCTGA
Transcript >Ani_SJS100_1|g4767.t1
ATGGCCAATAATAAGGTTGACGTCACTAGATCCTCGGACTTGGACGAGGCAACGGGGGGACGGACGGAGGGAATG
GTTCGGAAGGGAGCTATCATCGACAAGTCGGATCAGTTGTGCGCACTAGTCATGTGCGCCGAGCCACATTCCTGC
TCAGCTGTTCACCATCACGGCGAGCAGGATACCGTGGTTTACGCCGCAAAGGGCCACGGTTCCATTGTCTTCGAT
GGGGGAAAGCAGCGCAAAGACCTCTCCCCGGGTGACTTTGCTATCATTCCTGCCTACACGGAACACCAGGAGATG
AACCAATCAGATGAAGATGTTGAATGGGTGATCACCAGAGCAGGACGCAAGCCCATCACAGTCAACCTGCAAGGT
TGGTCTAATACTTCTAGCTGA
Gene >Ani_SJS100_1|g4767.t1
ATGGCCAATAATAAGGTTGACGTCACTAGATCCTCGGACTTGGACGAGGCAACGGGTATGTCAAGCCTTTCTGCA
AGAGATCCGAGGACAGTATCATGACCATAACATTGGATAGGGGGACGGACGGAGGGAATGGTTCGGAAGGGAGCT
ATCATCGACAAGTCGGATCAGTTGTGCGCACTAGGTTGGTTGAGTCCCTTTGCCAGGGGTTGAATGTTTCTAATA
CAACTTCTGCCAGTCATGTGCGCCGAGCCACATTCCTGCTCAGCTGTTCACCATCACGGCGAGCAGGATACCGTG
GTTTACGCCGCAAAGGGCCACGGTTCCATTGTCTTCGATGGGGGAAAGCAGCGCAAAGACCTCTCCCCGGGTGAC
TTTGCTATCATTCCTGCGTAAGTAGTAAGGCACTAACTAATATAAGTTCGTGAACTGACTCGGAGCCTACCTGTG
TGCAGCTACACGGAACACCAGGAGATGAACCAATCAGATGAAGATGTTGAATGGGTGATCACCAGAGCAGGACGC
AAGCCCATCACAGTCAACCTGCAAGGTTGGTCTAATACTTCTAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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