© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4737.t1 |
| Gene name | |
| Location | scaffold_025:13782..15281 |
| Strand | + |
| Gene length (bp) | 1499 |
| Transcript length (bp) | 1419 |
| Coding sequence length (bp) | 1419 |
| Protein length (aa) | 473 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 5.7E-32 | 40 | 172 |
| PF08031 | BBE | Berberine and berberine like | 1.6E-08 | 425 | 463 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0043168 | anion binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4737.t1 MSKWNELYEVIAKGQVLMPDDAEYAASLRRWSKAAEVNSAVVVKPTCAEEIAAAVKFATASKLPMAVCGGGHSTS GASSSEGVVIHLGNMRRVEVDDTNMTVSFEGGCLWADIDKALEARGLAAVGGAVNHTGVGGLILGGGHGWLTAKH GLAIDNLVAVQIVMADGCILDASETENAELFWAVRGAGAQLGVVRRFLYRVHHQEEVWSGILAFGPETLPQLVAF ANEFHNRDNREGHCLTIGVGHTLDGVTRILTAVPLYQGLEEEAKEYFSPLLDMKPMMNSTRMMSIAEVNTLQNPS CEYGIRRHQGSANVTMPLQAEAIQQMADMVWSFHDRHPNVTICSMAVELFSTHKLREVPQHATAYANRGAYYDVV TIFGWTDSDLDVTVRQFNTDLCTMIRSSNGYERQRYCEGEHCEASPVGRYLNMENGPVKPADAYGANLERLKRVK NRYDPENIFHKWHGVVGGGYKK* |
| Coding | >Ani_SJS100_1|g4737.t1 ATGTCTAAATGGAACGAACTATACGAAGTCATTGCAAAAGGACAAGTTTTGATGCCAGATGATGCTGAATATGCT GCCAGCCTTAGGAGATGGAGCAAGGCAGCTGAAGTCAATTCTGCCGTTGTAGTCAAACCAACCTGTGCTGAGGAG ATAGCTGCGGCGGTGAAGTTTGCCACAGCCAGCAAGCTCCCCATGGCCGTCTGTGGCGGTGGTCACTCGACTAGC GGGGCGTCATCATCAGAAGGTGTTGTCATACACCTTGGTAATATGCGAAGAGTCGAAGTGGATGATACTAACATG ACTGTGTCGTTTGAGGGTGGTTGCCTGTGGGCGGACATTGACAAGGCTTTAGAGGCCCGTGGATTGGCTGCTGTC GGGGGTGCTGTGAACCACACGGGAGTTGGAGGGTTGATCCTAGGTGGTGGTCATGGATGGCTGACAGCGAAGCAT GGCCTCGCAATTGACAACCTCGTAGCAGTCCAGATTGTCATGGCTGATGGCTGCATCCTTGACGCCTCTGAAACA GAAAATGCAGAGCTGTTTTGGGCCGTCCGCGGGGCTGGCGCACAGCTTGGGGTGGTAAGGCGATTTCTGTACCGT GTCCACCACCAGGAAGAGGTGTGGAGTGGTATCCTCGCGTTTGGCCCGGAAACCCTACCTCAACTGGTGGCATTT GCCAATGAGTTTCACAATCGAGATAATCGCGAAGGTCACTGCTTGACTATCGGAGTGGGTCACACGCTGGACGGA GTGACCCGTATACTCACTGCTGTCCCACTTTATCAGGGCCTAGAGGAGGAGGCCAAGGAGTACTTTTCACCACTG CTTGATATGAAACCTATGATGAACTCGACAAGAATGATGTCCATCGCTGAGGTCAACACCTTACAGAACCCATCG TGCGAATACGGAATACGCCGTCACCAAGGCTCCGCAAATGTCACGATGCCCCTGCAAGCAGAAGCCATTCAGCAA ATGGCAGATATGGTCTGGTCGTTTCATGATCGCCATCCGAACGTAACCATTTGCTCCATGGCAGTGGAACTTTTC TCGACCCACAAGCTCCGCGAGGTTCCTCAGCATGCTACTGCGTACGCCAATCGTGGGGCGTACTATGATGTTGTC ACAATTTTTGGATGGACAGATTCCGACCTTGATGTGACTGTTCGTCAATTCAATACGGATTTATGCACGATGATA AGAAGTTCCAACGGATATGAGCGTCAGCGTTACTGTGAGGGGGAGCATTGCGAGGCAAGTCCAGTGGGGCGTTAT CTGAACATGGAAAATGGGCCAGTAAAGCCTGCTGACGCATATGGAGCCAATCTGGAGAGACTGAAGAGGGTGAAG AACAGGTATGATCCTGAGAACATTTTCCATAAGTGGCATGGTGTGGTTGGTGGAGGTTACAAGAAATGA |
| Transcript | >Ani_SJS100_1|g4737.t1 ATGTCTAAATGGAACGAACTATACGAAGTCATTGCAAAAGGACAAGTTTTGATGCCAGATGATGCTGAATATGCT GCCAGCCTTAGGAGATGGAGCAAGGCAGCTGAAGTCAATTCTGCCGTTGTAGTCAAACCAACCTGTGCTGAGGAG ATAGCTGCGGCGGTGAAGTTTGCCACAGCCAGCAAGCTCCCCATGGCCGTCTGTGGCGGTGGTCACTCGACTAGC GGGGCGTCATCATCAGAAGGTGTTGTCATACACCTTGGTAATATGCGAAGAGTCGAAGTGGATGATACTAACATG ACTGTGTCGTTTGAGGGTGGTTGCCTGTGGGCGGACATTGACAAGGCTTTAGAGGCCCGTGGATTGGCTGCTGTC GGGGGTGCTGTGAACCACACGGGAGTTGGAGGGTTGATCCTAGGTGGTGGTCATGGATGGCTGACAGCGAAGCAT GGCCTCGCAATTGACAACCTCGTAGCAGTCCAGATTGTCATGGCTGATGGCTGCATCCTTGACGCCTCTGAAACA GAAAATGCAGAGCTGTTTTGGGCCGTCCGCGGGGCTGGCGCACAGCTTGGGGTGGTAAGGCGATTTCTGTACCGT GTCCACCACCAGGAAGAGGTGTGGAGTGGTATCCTCGCGTTTGGCCCGGAAACCCTACCTCAACTGGTGGCATTT GCCAATGAGTTTCACAATCGAGATAATCGCGAAGGTCACTGCTTGACTATCGGAGTGGGTCACACGCTGGACGGA GTGACCCGTATACTCACTGCTGTCCCACTTTATCAGGGCCTAGAGGAGGAGGCCAAGGAGTACTTTTCACCACTG CTTGATATGAAACCTATGATGAACTCGACAAGAATGATGTCCATCGCTGAGGTCAACACCTTACAGAACCCATCG TGCGAATACGGAATACGCCGTCACCAAGGCTCCGCAAATGTCACGATGCCCCTGCAAGCAGAAGCCATTCAGCAA ATGGCAGATATGGTCTGGTCGTTTCATGATCGCCATCCGAACGTAACCATTTGCTCCATGGCAGTGGAACTTTTC TCGACCCACAAGCTCCGCGAGGTTCCTCAGCATGCTACTGCGTACGCCAATCGTGGGGCGTACTATGATGTTGTC ACAATTTTTGGATGGACAGATTCCGACCTTGATGTGACTGTTCGTCAATTCAATACGGATTTATGCACGATGATA AGAAGTTCCAACGGATATGAGCGTCAGCGTTACTGTGAGGGGGAGCATTGCGAGGCAAGTCCAGTGGGGCGTTAT CTGAACATGGAAAATGGGCCAGTAAAGCCTGCTGACGCATATGGAGCCAATCTGGAGAGACTGAAGAGGGTGAAG AACAGGTATGATCCTGAGAACATTTTCCATAAGTGGCATGGTGTGGTTGGTGGAGGTTACAAGAAATGA |
| Gene | >Ani_SJS100_1|g4737.t1 ATGTCTAAATGGAACGAACTATACGAAGTCATTGCAAAAGGACAAGTTTTGATGCCAGATGATGCTGAATATGCT GCCAGCCTTAGGAGATGGAGCAAGGCAGCTGAAGTCAATTCTGTCAGTCAGACCCCCGATTTCCAACTAACTAAC CCAACTGTCATGTTAATTGTAAGTATGTTATACTAACTCCTTCCTAGGCCGTTGTAGTCAAACCAACCTGTGCTG AGGAGATAGCTGCGGCGGTGAAGTTTGCCACAGCCAGCAAGCTCCCCATGGCCGTCTGTGGCGGTGGTCACTCGA CTAGCGGGGCGTCATCATCAGAAGGTGTTGTCATACACCTTGGTAATATGCGAAGAGTCGAAGTGGATGATACTA ACATGACTGTGTCGTTTGAGGGTGGTTGCCTGTGGGCGGACATTGACAAGGCTTTAGAGGCCCGTGGATTGGCTG CTGTCGGGGGTGCTGTGAACCACACGGGAGTTGGAGGGTTGATCCTAGGTGGTGGTCATGGATGGCTGACAGCGA AGCATGGCCTCGCAATTGACAACCTCGTAGCAGTCCAGATTGTCATGGCTGATGGCTGCATCCTTGACGCCTCTG AAACAGAAAATGCAGAGCTGTTTTGGGCCGTCCGCGGGGCTGGCGCACAGCTTGGGGTGGTAAGGCGATTTCTGT ACCGTGTCCACCACCAGGAAGAGGTGTGGAGTGGTATCCTCGCGTTTGGCCCGGAAACCCTACCTCAACTGGTGG CATTTGCCAATGAGTTTCACAATCGAGATAATCGCGAAGGTCACTGCTTGACTATCGGAGTGGGTCACACGCTGG ACGGAGTGACCCGTATACTCACTGCTGTCCCACTTTATCAGGGCCTAGAGGAGGAGGCCAAGGAGTACTTTTCAC CACTGCTTGATATGAAACCTATGATGAACTCGACAAGAATGATGTCCATCGCTGAGGTCAACACCTTACAGAACC CATCGTGCGAATACGGAATACGCCGTCACCAAGGCTCCGCAAATGTCACGATGCCCCTGCAAGCAGAAGCCATTC AGCAAATGGCAGATATGGTCTGGTCGTTTCATGATCGCCATCCGAACGTAACCATTTGCTCCATGGCAGTGGAAC TTTTCTCGACCCACAAGCTCCGCGAGGTTCCTCAGCATGCTACTGCGTACGCCAATCGTGGGGCGTACTATGATG TTGTCACAATTTTTGGATGGACAGATTCCGACCTTGATGTGACTGTTCGTCAATTCAATACGGATTTATGCACGA TGATAAGAAGTTCCAACGGATATGAGCGTCAGCGTTACTGTGAGGGGGAGCATTGCGAGGCAAGTCCAGTGGGGC GTTATCTGAACATGGAAAATGGGCCAGTAAAGCCTGCTGACGCATATGGAGCCAATCTGGAGAGACTGAAGAGGG TGAAGAACAGGTATGATCCTGAGAACATTTTCCATAAGTGGCATGGTGTGGTTGGTGGAGGTTACAAGAAATGA |