Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4732.t1
Gene name
Locationscaffold_024:386316..387335
Strand+
Gene length (bp)1019
Transcript length (bp)963
Coding sequence length (bp)963
Protein length (aa) 321

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12796 Ank_2 Ankyrin repeats (3 copies) 5.0E-08 258 318
PF13606 Ank_3 Ankyrin repeat 3.1E-04 292 318
PF00023 Ank Ankyrin repeat 2.0E-02 292 317

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 63 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4732.t1
MNQIQQQQQQQQHPLVGSNGTTTLPVVVDTRRPSGRPKHNSYTDLMKPGESWEDLPDAAERRRIQNRLAQRAYRR
NMRDRTKEVELLKSQVKNLQEAINSNSSTPNDSNSGSISASASTSDADDRPTRASSQVSTSSVSPGPREAPSSYF
PSPDQEMLGDGLSWPTDLDHDFSNCFDKTKDVTAAVTSMPTSASPSAMAATASAQNAMRWLESDVYYPFPPSPPN
VDPMLRSVPSTISDTHQRIASGCSLSSRDPEADEPLIHIAISRGTIDTLQLLLMTYPISVNVRDRAGYTPLQRAV
ITGRTDMMKLLIEHGADAGL*
Coding >Ani_SJS100_1|g4732.t1
ATGAATCAAATACAGCAGCAGCAACAGCAACAGCAACACCCTCTGGTAGGGTCAAACGGGACTACTACTTTGCCC
GTCGTCGTTGACACTCGACGGCCGTCTGGACGTCCCAAACATAATTCATACACCGACTTGATGAAGCCAGGCGAG
AGCTGGGAGGATCTCCCGGATGCCGCAGAGCGGAGGAGAATTCAGAACCGTCTAGCACAACGGGCATACCGCCGA
AACATGCGCGACCGCACCAAAGAGGTCGAGCTCCTCAAAAGTCAAGTCAAAAACCTTCAAGAAGCCATCAACAGC
AACAGCTCCACCCCCAACGACAGCAACAGCGGCAGCATCAGCGCCAGCGCGAGTACCAGCGACGCGGACGACCGT
CCCACGCGAGCCTCGTCGCAAGTCAGTACTAGCAGTGTCTCTCCTGGACCCCGCGAAGCTCCGAGCTCATACTTC
CCATCCCCGGACCAGGAGATGCTAGGCGATGGACTGAGCTGGCCGACGGACCTAGACCACGACTTCAGCAACTGC
TTCGATAAAACAAAGGACGTTACAGCGGCTGTCACGAGCATGCCGACCTCCGCGTCACCTTCGGCGATGGCCGCA
ACAGCGAGCGCCCAGAACGCGATGCGGTGGCTGGAGTCTGATGTCTACTATCCTTTTCCGCCGTCGCCGCCCAAC
GTCGACCCCATGCTGCGCTCCGTGCCGAGCACCATCTCCGACACACATCAACGGATCGCCTCAGGGTGTTCCTTG
TCCAGCCGTGATCCCGAGGCGGACGAACCCTTGATCCACATCGCCATTTCGCGCGGCACAATTGACACTCTTCAA
TTGTTGCTCATGACCTACCCCATCTCGGTGAATGTCCGTGACCGGGCGGGCTACACGCCGCTCCAACGAGCTGTC
ATCACTGGAAGGACAGACATGATGAAACTGCTCATTGAACATGGTGCCGACGCGGGGCTATGA
Transcript >Ani_SJS100_1|g4732.t1
ATGAATCAAATACAGCAGCAGCAACAGCAACAGCAACACCCTCTGGTAGGGTCAAACGGGACTACTACTTTGCCC
GTCGTCGTTGACACTCGACGGCCGTCTGGACGTCCCAAACATAATTCATACACCGACTTGATGAAGCCAGGCGAG
AGCTGGGAGGATCTCCCGGATGCCGCAGAGCGGAGGAGAATTCAGAACCGTCTAGCACAACGGGCATACCGCCGA
AACATGCGCGACCGCACCAAAGAGGTCGAGCTCCTCAAAAGTCAAGTCAAAAACCTTCAAGAAGCCATCAACAGC
AACAGCTCCACCCCCAACGACAGCAACAGCGGCAGCATCAGCGCCAGCGCGAGTACCAGCGACGCGGACGACCGT
CCCACGCGAGCCTCGTCGCAAGTCAGTACTAGCAGTGTCTCTCCTGGACCCCGCGAAGCTCCGAGCTCATACTTC
CCATCCCCGGACCAGGAGATGCTAGGCGATGGACTGAGCTGGCCGACGGACCTAGACCACGACTTCAGCAACTGC
TTCGATAAAACAAAGGACGTTACAGCGGCTGTCACGAGCATGCCGACCTCCGCGTCACCTTCGGCGATGGCCGCA
ACAGCGAGCGCCCAGAACGCGATGCGGTGGCTGGAGTCTGATGTCTACTATCCTTTTCCGCCGTCGCCGCCCAAC
GTCGACCCCATGCTGCGCTCCGTGCCGAGCACCATCTCCGACACACATCAACGGATCGCCTCAGGGTGTTCCTTG
TCCAGCCGTGATCCCGAGGCGGACGAACCCTTGATCCACATCGCCATTTCGCGCGGCACAATTGACACTCTTCAA
TTGTTGCTCATGACCTACCCCATCTCGGTGAATGTCCGTGACCGGGCGGGCTACACGCCGCTCCAACGAGCTGTC
ATCACTGGAAGGACAGACATGATGAAACTGCTCATTGAACATGGTGCCGACGCGGGGCTATGA
Gene >Ani_SJS100_1|g4732.t1
ATGAATCAAATACAGCAGCAGCAACAGCAACAGCAACACCCTCTGGTAGGGTCAAACGGGACTACTACTTTGCCC
GTCGTCGTTGACACTCGACGGCCGTCTGGACGTCCCAAACATAATTCATACACCGACTTGATGAAGCCAGGCGAG
AGCTGGGAGGATCTCCCGGATGCCGCAGAGCGGAGGAGAATTCAGAACCGTCTAGCACAACGGGCATACCGTGAG
TACATCCTCTACTCGTGGTTCGCGAATAGCATCGCTGACGCTGTCTACAAGGCCGAAACATGCGCGACCGCACCA
AAGAGGTCGAGCTCCTCAAAAGTCAAGTCAAAAACCTTCAAGAAGCCATCAACAGCAACAGCTCCACCCCCAACG
ACAGCAACAGCGGCAGCATCAGCGCCAGCGCGAGTACCAGCGACGCGGACGACCGTCCCACGCGAGCCTCGTCGC
AAGTCAGTACTAGCAGTGTCTCTCCTGGACCCCGCGAAGCTCCGAGCTCATACTTCCCATCCCCGGACCAGGAGA
TGCTAGGCGATGGACTGAGCTGGCCGACGGACCTAGACCACGACTTCAGCAACTGCTTCGATAAAACAAAGGACG
TTACAGCGGCTGTCACGAGCATGCCGACCTCCGCGTCACCTTCGGCGATGGCCGCAACAGCGAGCGCCCAGAACG
CGATGCGGTGGCTGGAGTCTGATGTCTACTATCCTTTTCCGCCGTCGCCGCCCAACGTCGACCCCATGCTGCGCT
CCGTGCCGAGCACCATCTCCGACACACATCAACGGATCGCCTCAGGGTGTTCCTTGTCCAGCCGTGATCCCGAGG
CGGACGAACCCTTGATCCACATCGCCATTTCGCGCGGCACAATTGACACTCTTCAATTGTTGCTCATGACCTACC
CCATCTCGGTGAATGTCCGTGACCGGGCGGGCTACACGCCGCTCCAACGAGCTGTCATCACTGGAAGGACAGACA
TGATGAAACTGCTCATTGAACATGGTGCCGACGCGGGGCTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail