Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g4731.t1
Gene name
Location	scaffold_024:384069..384990
Strand	+
Gene length (bp)	921
Transcript length (bp)	921
Coding sequence length (bp)	921
Protein length (aa)	307

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13279	4HBT_2	Thioesterase-like superfamily	8.0E-07	87	167

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 22	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g4731.t1 MPTILLIFAVPILILLLLTNAKSLPLTYSLQLLPSLYRILQPRLSRNAPRPKELVSPQPINNPKLFYPALPSLFR PHTTQTHCPLPEIDLNLHKSNSTFFTDADLSRARLLSRLLGPALAATGGMPMLAAVQARFLREIRPFQRYCVTSR ILAWDQRSLWAITYFLRGDEYRGMMEVDLLGGGPAAVLGNEKLRKGVLAVLVSRYVVKAGRVTVPPVEVFKRAGL LIGGDYDDEEKCDDFSHSNGGIFASGVEKEKEEDSLVRTGSKIGSTSMKTKIHPKDEEIWPADRVEEVIGSAMAF IGECML*
Coding	>Ani_SJS100_1\|g4731.t1 ATGCCCACCATCCTCCTCATCTTTGCAGTCCCCATCCTCATCCTCCTCCTCCTAACCAACGCCAAATCCCTCCCA CTCACATACTCTCTCCAACTCCTCCCCTCCCTCTACCGAATCCTGCAACCCCGCCTCTCGCGCAACGCTCCACGA CCCAAAGAGCTCGTATCGCCGCAACCAATCAACAACCCAAAGCTCTTCTATCCAGCCCTACCCAGCCTTTTCCGC CCCCACACAACTCAAACCCACTGCCCCCTGCCGGAAATCGACCTGAACCTACACAAAAGCAACAGCACTTTCTTC ACAGATGCGGACCTCAGCCGCGCCCGCCTCCTCAGTCGTCTCCTGGGGCCAGCCTTGGCAGCAACCGGCGGAATG CCCATGCTGGCTGCCGTGCAGGCGCGGTTCTTGCGCGAGATCCGCCCCTTTCAGCGGTATTGCGTTACATCTCGG ATCCTGGCGTGGGATCAGCGGTCGTTGTGGGCTATTACGTATTTCTTGCGGGGAGATGAGTACAGGGGTATGATG GAGGTGGATCTACTTGGTGGAGGGCCCGCCGCGGTGTTGGGGAATGAGAAGCTTCGCAAGGGGGTGTTGGCTGTG CTGGTGAGTCGGTATGTGGTTAAGGCTGGACGAGTGACGGTGCCTCCTGTGGAGGTGTTCAAGCGGGCGGGGTTG TTAATTGGTGGTGATTATGATGATGAGGAGAAGTGTGATGACTTTAGTCATTCTAATGGGGGTATCTTTGCTAGC GGTGTTGAGAAGGAGAAAGAGGAGGATTCGCTTGTGCGAACGGGAAGTAAGATTGGGAGTACTAGCATGAAGACC AAGATCCACCCGAAGGATGAAGAAATCTGGCCTGCAGACCGTGTGGAGGAGGTGATTGGGTCTGCGATGGCGTTC ATCGGAGAATGCATGCTCTAG
Transcript	>Ani_SJS100_1\|g4731.t1 ATGCCCACCATCCTCCTCATCTTTGCAGTCCCCATCCTCATCCTCCTCCTCCTAACCAACGCCAAATCCCTCCCA CTCACATACTCTCTCCAACTCCTCCCCTCCCTCTACCGAATCCTGCAACCCCGCCTCTCGCGCAACGCTCCACGA CCCAAAGAGCTCGTATCGCCGCAACCAATCAACAACCCAAAGCTCTTCTATCCAGCCCTACCCAGCCTTTTCCGC CCCCACACAACTCAAACCCACTGCCCCCTGCCGGAAATCGACCTGAACCTACACAAAAGCAACAGCACTTTCTTC ACAGATGCGGACCTCAGCCGCGCCCGCCTCCTCAGTCGTCTCCTGGGGCCAGCCTTGGCAGCAACCGGCGGAATG CCCATGCTGGCTGCCGTGCAGGCGCGGTTCTTGCGCGAGATCCGCCCCTTTCAGCGGTATTGCGTTACATCTCGG ATCCTGGCGTGGGATCAGCGGTCGTTGTGGGCTATTACGTATTTCTTGCGGGGAGATGAGTACAGGGGTATGATG GAGGTGGATCTACTTGGTGGAGGGCCCGCCGCGGTGTTGGGGAATGAGAAGCTTCGCAAGGGGGTGTTGGCTGTG CTGGTGAGTCGGTATGTGGTTAAGGCTGGACGAGTGACGGTGCCTCCTGTGGAGGTGTTCAAGCGGGCGGGGTTG TTAATTGGTGGTGATTATGATGATGAGGAGAAGTGTGATGACTTTAGTCATTCTAATGGGGGTATCTTTGCTAGC GGTGTTGAGAAGGAGAAAGAGGAGGATTCGCTTGTGCGAACGGGAAGTAAGATTGGGAGTACTAGCATGAAGACC AAGATCCACCCGAAGGATGAAGAAATCTGGCCTGCAGACCGTGTGGAGGAGGTGATTGGGTCTGCGATGGCGTTC ATCGGAGAATGCATGCTCTAG
Gene	>Ani_SJS100_1\|g4731.t1 ATGCCCACCATCCTCCTCATCTTTGCAGTCCCCATCCTCATCCTCCTCCTCCTAACCAACGCCAAATCCCTCCCA CTCACATACTCTCTCCAACTCCTCCCCTCCCTCTACCGAATCCTGCAACCCCGCCTCTCGCGCAACGCTCCACGA CCCAAAGAGCTCGTATCGCCGCAACCAATCAACAACCCAAAGCTCTTCTATCCAGCCCTACCCAGCCTTTTCCGC CCCCACACAACTCAAACCCACTGCCCCCTGCCGGAAATCGACCTGAACCTACACAAAAGCAACAGCACTTTCTTC ACAGATGCGGACCTCAGCCGCGCCCGCCTCCTCAGTCGTCTCCTGGGGCCAGCCTTGGCAGCAACCGGCGGAATG CCCATGCTGGCTGCCGTGCAGGCGCGGTTCTTGCGCGAGATCCGCCCCTTTCAGCGGTATTGCGTTACATCTCGG ATCCTGGCGTGGGATCAGCGGTCGTTGTGGGCTATTACGTATTTCTTGCGGGGAGATGAGTACAGGGGTATGATG GAGGTGGATCTACTTGGTGGAGGGCCCGCCGCGGTGTTGGGGAATGAGAAGCTTCGCAAGGGGGTGTTGGCTGTG CTGGTGAGTCGGTATGTGGTTAAGGCTGGACGAGTGACGGTGCCTCCTGTGGAGGTGTTCAAGCGGGCGGGGTTG TTAATTGGTGGTGATTATGATGATGAGGAGAAGTGTGATGACTTTAGTCATTCTAATGGGGGTATCTTTGCTAGC GGTGTTGAGAAGGAGAAAGAGGAGGATTCGCTTGTGCGAACGGGAAGTAAGATTGGGAGTACTAGCATGAAGACC AAGATCCACCCGAAGGATGAAGAAATCTGGCCTGCAGACCGTGTGGAGGAGGTGATTGGGTCTGCGATGGCGTTC ATCGGAGAATGCATGCTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail