© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4714.t1 |
| Gene name | |
| Location | scaffold_024:338712..339860 |
| Strand | + |
| Gene length (bp) | 1148 |
| Transcript length (bp) | 1083 |
| Coding sequence length (bp) | 1083 |
| Protein length (aa) | 361 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10067 | DUF2306 | Predicted membrane protein (DUF2306) | 3.4E-14 | 86 | 200 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 30 | 52 | 22 |
| 2 | 85 | 107 | 22 |
| 3 | 120 | 137 | 17 |
| 4 | 147 | 169 | 22 |
| 5 | 182 | 199 | 17 |
| 6 | 272 | 294 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4714.t1 MVKVDRPPANNFVATARKIYNPIGFAKGYNFILWMISAGALLGFSLARLMYLDFDNIFCPTDQNKANALPGECFY YQDTRGRVGILLHLGAILPACLLAFLQFVPIIRHKVILFHRINGYLVIIGSFTSMAGVLMIAEHSFGGGLSIQIA LGLALIIFLSCICIAYYNIKRLQIEQHRAWMIRAWVVGGFIITMRIIGITTDRVLVALSPEQYFVAYSCAEISFM LNGNLSVVQSLHPSCTGANPNHHVLVNAFSANGTGNVDQAAAGLDISFSAAAWLAVAIHVFAAELYLHLTPAESA RLRRVSYQRQLEAGMRWPGNAGLTAERVGDAEPFLMVKGVERSESGSEMEVAVRTGDGRD* |
| Coding | >Ani_SJS100_1|g4714.t1 ATGGTCAAAGTCGACCGCCCCCCAGCCAACAACTTCGTAGCCACAGCCCGAAAGATCTACAACCCGATCGGCTTC GCCAAAGGCTACAACTTCATCCTATGGATGATATCCGCCGGTGCACTCCTCGGCTTCTCTCTCGCGCGTCTGATG TACCTTGACTTCGACAACATCTTCTGTCCCACAGACCAGAACAAAGCCAATGCTCTTCCCGGAGAATGCTTCTAC TACCAGGATACTCGCGGCCGCGTCGGCATCCTCCTCCACCTGGGCGCCATCCTCCCAGCCTGTCTGCTCGCCTTC CTGCAATTCGTCCCCATCATCCGCCACAAAGTGATCCTCTTCCACCGCATCAACGGCTACCTGGTCATCATCGGC TCGTTCACCAGCATGGCCGGCGTCCTAATGATAGCCGAGCACAGCTTCGGAGGTGGCCTGAGCATCCAAATCGCC CTCGGCTTAGCGCTCATCATCTTCCTTAGCTGTATCTGCATCGCTTACTATAATATCAAACGACTCCAGATCGAG CAGCACCGTGCATGGATGATCCGCGCTTGGGTCGTGGGCGGCTTCATCATAACCATGCGCATCATCGGCATCACA ACAGACAGAGTCCTCGTGGCCCTCAGCCCAGAACAATACTTCGTAGCCTACTCCTGCGCCGAGATCTCCTTCATG CTGAATGGGAACCTATCCGTCGTGCAATCCCTCCACCCATCCTGCACTGGCGCTAATCCGAACCACCACGTTCTC GTCAACGCCTTCAGCGCCAACGGCACCGGGAACGTCGATCAGGCTGCCGCCGGCCTCGATATCAGTTTCAGTGCT GCGGCGTGGCTGGCTGTCGCTATTCATGTCTTTGCGGCGGAGCTGTATCTTCATCTTACTCCGGCGGAGTCGGCG AGGCTGAGGCGTGTGTCGTATCAGAGGCAGTTGGAGGCGGGCATGAGATGGCCCGGGAATGCGGGGTTGACGGCG GAGAGGGTCGGTGATGCGGAGCCGTTTTTGATGGTGAAGGGGGTGGAGAGGAGTGAGAGTGGGAGTGAGATGGAG GTGGCTGTTAGGACGGGGGATGGGAGGGATTAG |
| Transcript | >Ani_SJS100_1|g4714.t1 ATGGTCAAAGTCGACCGCCCCCCAGCCAACAACTTCGTAGCCACAGCCCGAAAGATCTACAACCCGATCGGCTTC GCCAAAGGCTACAACTTCATCCTATGGATGATATCCGCCGGTGCACTCCTCGGCTTCTCTCTCGCGCGTCTGATG TACCTTGACTTCGACAACATCTTCTGTCCCACAGACCAGAACAAAGCCAATGCTCTTCCCGGAGAATGCTTCTAC TACCAGGATACTCGCGGCCGCGTCGGCATCCTCCTCCACCTGGGCGCCATCCTCCCAGCCTGTCTGCTCGCCTTC CTGCAATTCGTCCCCATCATCCGCCACAAAGTGATCCTCTTCCACCGCATCAACGGCTACCTGGTCATCATCGGC TCGTTCACCAGCATGGCCGGCGTCCTAATGATAGCCGAGCACAGCTTCGGAGGTGGCCTGAGCATCCAAATCGCC CTCGGCTTAGCGCTCATCATCTTCCTTAGCTGTATCTGCATCGCTTACTATAATATCAAACGACTCCAGATCGAG CAGCACCGTGCATGGATGATCCGCGCTTGGGTCGTGGGCGGCTTCATCATAACCATGCGCATCATCGGCATCACA ACAGACAGAGTCCTCGTGGCCCTCAGCCCAGAACAATACTTCGTAGCCTACTCCTGCGCCGAGATCTCCTTCATG CTGAATGGGAACCTATCCGTCGTGCAATCCCTCCACCCATCCTGCACTGGCGCTAATCCGAACCACCACGTTCTC GTCAACGCCTTCAGCGCCAACGGCACCGGGAACGTCGATCAGGCTGCCGCCGGCCTCGATATCAGTTTCAGTGCT GCGGCGTGGCTGGCTGTCGCTATTCATGTCTTTGCGGCGGAGCTGTATCTTCATCTTACTCCGGCGGAGTCGGCG AGGCTGAGGCGTGTGTCGTATCAGAGGCAGTTGGAGGCGGGCATGAGATGGCCCGGGAATGCGGGGTTGACGGCG GAGAGGGTCGGTGATGCGGAGCCGTTTTTGATGGTGAAGGGGGTGGAGAGGAGTGAGAGTGGGAGTGAGATGGAG GTGGCTGTTAGGACGGGGGATGGGAGGGATTAG |
| Gene | >Ani_SJS100_1|g4714.t1 ATGGTCAAAGTCGACCGCCCCCCAGCCAACAACTTCGTAGCCACAGCCCGAAAGATCTACAACCCGATCGGCTTC GCCAAAGGCTACAACTTCATCCTATGGATGATATCCGCCGGTGCACTCCTCGGCTTCTCTCTCGCGCGTCTGATG TACCTTGACTTCGACAACATCTTCTGTCCCACAGACCAGAACAAAGCCAATGCTCTTCCCGGAGAATGCTTCTAC TACCAGGATACTCGCGGCCGCGTCGGCATCCTCCTCCACCTGGGCGCCATCCTCCCAGCCTGTCTGCTCGCCTTC CTGCAATTCGTCCCCATCATCCGCCACAAAGTGATCCTCTTCCACCGCATCAACGGCTACCTGGTCATCATCGGC TCGTTCACCAGCATGGCCGGCGTCCTAATGATAGCCGAGCACAGCTTCGGAGGTGGCCTGAGCATCCAAATCGCC CTCGGCTTAGCGCTCATCATCTTCCTTAGCTGTATCTGCATCGCTTACTATAATATCAAACGACTCCAGATCGAG CAGCACCGTGCATGGATGATCCGCGCTTGGGTCGTGGTTAGAACCCCCTTCCCCACCCCATCCCCTATTCTTTCT TCCACCCTAAATCCTGAACCCTATAGGGCGGCTTCATCATAACCATGCGCATCATCGGCATCACAACAGACAGAG TCCTCGTGGCCCTCAGCCCAGAACAATACTTCGTAGCCTACTCCTGCGCCGAGATCTCCTTCATGCTGAATGGGA ACCTATCCGTCGTGCAATCCCTCCACCCATCCTGCACTGGCGCTAATCCGAACCACCACGTTCTCGTCAACGCCT TCAGCGCCAACGGCACCGGGAACGTCGATCAGGCTGCCGCCGGCCTCGATATCAGTTTCAGTGCTGCGGCGTGGC TGGCTGTCGCTATTCATGTCTTTGCGGCGGAGCTGTATCTTCATCTTACTCCGGCGGAGTCGGCGAGGCTGAGGC GTGTGTCGTATCAGAGGCAGTTGGAGGCGGGCATGAGATGGCCCGGGAATGCGGGGTTGACGGCGGAGAGGGTCG GTGATGCGGAGCCGTTTTTGATGGTGAAGGGGGTGGAGAGGAGTGAGAGTGGGAGTGAGATGGAGGTGGCTGTTA GGACGGGGGATGGGAGGGATTAG |